AT4G18520 : -
Query Information
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AGICode AT4G18520
Description Pentatricopeptide repeat (PPR) superfamily protein
Gene information
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  Gene Code Description / Information Gene name Correlation link
pcc 2.5% 97.5% PPI
1 AT4G18520 Pentatricopeptide repeat (PPR) superfamily protein 1 0.33 -0.3
2 AT5G09320 Vacuolar sorting protein 9 (VPS9) domain VPS9B 0.73 0.31 -0.3
3 AT5G61040 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT5G08010.1); Has 1807 Blast hits
to 1807 proteins in 277 species: Archae - 0; Bacteria - 0;
Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0;
Other Eukaryotes - 339 (source: NCBI BLink).		 0.72 0.32 -0.32
4 AT5G13270 Pentatricopeptide repeat (PPR) superfamily protein REQUIRED FOR ACCD RNA EDITING 1 0.72 0.31 -0.33
5 AT3G04550 unknown protein; INVOLVED IN: biological_process unknown;
LOCATED IN: chloroplast stroma, chloroplast; EXPRESSED IN:
22 plant structures; EXPRESSED DURING: 13 growth stages;
BEST Arabidopsis thaliana protein match is: unknown protein
(TAIR:AT5G28500.1); Has 110 Blast hits to 110 proteins in
51 species: Archae - 0; Bacteria - 67; Metazoa - 1; Fungi -
0; Plants - 41; Viruses - 0; Other Eukaryotes - 1 (source:
NCBI BLink).		 0.71 0.32 -0.34
6 AT2G36250 Tubulin/FtsZ family protein ATFTSZ2-1, FTSZ2-1 0.71 0.31 -0.3
7 AT2G34090 maternal effect embryo arrest 18 maternal effect embryo arrest 18 0.69 0.3 -0.31
8 AT3G61580 Fatty acid/sphingolipid desaturase AtSLD1, sphingoid LCB desaturase 1 0.69 0.3 -0.31
9 AT5G62350 Plant invertase/pectin methylesterase inhibitor superfamily
protein		 0.68 0.31 -0.31
10 AT3G09650 Tetratricopeptide repeat (TPR)-like superfamily protein CRM3, HIGH CHLOROPHYLL
FLUORESCENCE 152		 0.68 0.32 -0.3
11 AT2G39920 HAD superfamily, subfamily IIIB acid phosphatase 0.68 0.32 -0.31
12 AT4G18390 TEOSINTE BRANCHED 1, cycloidea and PCF transcription factor
2		 TCP2, TEOSINTE BRANCHED 1,
cycloidea and PCF transcription
factor 2		 0.68 0.32 -0.31
13 AT1G20920 P-loop containing nucleoside triphosphate hydrolases
superfamily protein		 0.67 0.31 -0.32
14 AT3G23820 UDP-D-glucuronate 4-epimerase 6 UDP-D-glucuronate 4-epimerase 6 0.67 0.3 -0.33
15 AT1G78930 Mitochondrial transcription termination factor family
protein		 0.66 0.32 -0.31
16 AT5G65640 beta HLH protein 93 beta HLH protein 93 -0.66 0.34 -0.31
17 AT4G05330 ARF-GAP domain 13 ARF-GAP domain 13 0.66 0.33 -0.31
18 AT3G17830 Molecular chaperone Hsp40/DnaJ family protein 0.66 0.32 -0.33
19 AT1G14685 basic pentacysteine 2 BASIC PENTACYSTEINE 2, BBR/BPC2,
basic pentacysteine 2		 0.65 0.31 -0.29
20 AT2G43235 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED
DURING: 13 growth stages; Has 41 Blast hits to 41 proteins
in 16 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi
- 0; Plants - 40; Viruses - 0; Other Eukaryotes - 1
(source: NCBI BLink).		 0.65 0.3 -0.33
21 AT1G04860 ubiquitin-specific protease 2 ATUBP2, ubiquitin-specific
protease 2		 0.65 0.31 -0.3
22 AT1G13930 Involved in response to salt stress. Knockout mutants are
hypersensitive to salt stress.		 0.64 0.3 -0.33
23 AT3G06650 ATP-citrate lyase B-1 ATP-citrate lyase B-1 0.64 0.32 -0.31
24 AT5G42370 Calcineurin-like metallo-phosphoesterase superfamily
protein		 -0.64 0.33 -0.31
25 AT2G33500 B-box type zinc finger protein with CCT domain 0.64 0.29 -0.31
26 AT5G45380 solute:sodium symporters;urea transmembrane transporters ATDUR3, DEGRADATION OF UREA 3 -0.64 0.31 -0.35
27 AT5G21040 F-box protein 2 F-box protein 2 0.64 0.32 -0.33
28 AT3G05800 AtBS1(activation-tagged BRI1 suppressor 1)-interacting
factor 1		 AtBS1(activation-tagged BRI1
suppressor 1)-interacting factor 1		 0.63 0.31 -0.3
29 AT2G02080 indeterminate(ID)-domain 4 indeterminate(ID)-domain 4,
indeterminate(ID)-domain 4		 0.63 0.32 -0.31
30 AT1G67510 Leucine-rich repeat protein kinase family protein 0.63 0.29 -0.34
31 AT4G31780 monogalactosyl diacylglycerol synthase 1 EMBRYO DEFECTIVE 2797,
monogalactosyl diacylglycerol
synthase 1,
MONOGALACTOSYLDIACYLGLYCEROL
SYNTHASE A, UDP-glycosyl
transferase 81A1		 0.62 0.3 -0.32
32 AT1G72040 P-loop containing nucleoside triphosphate hydrolases
superfamily protein		 0.61 0.31 -0.31
33 AT1G16610 arginine/serine-rich 45 RNPS1, arginine/serine-rich 45 0.61 0.29 -0.29
34 AT5G07180 ERECTA-like 2 ERECTA-like 2 0.61 0.33 -0.31
35 AT4G09080 Outer membrane OMP85 family protein TRANSLOCON OUTER MEMBRANE COMPLEX
75-IV, translocon at the outer
envelope membrane of chloroplasts
75-IV		 0.61 0.31 -0.31
36 AT4G14300 RNA-binding (RRM/RBD/RNP motifs) family protein 0.61 0.31 -0.33
37 AT1G15790 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT1G15780.1); Has 170 Blast hits
to 94 proteins in 14 species: Archae - 0; Bacteria - 0;
Metazoa - 0; Fungi - 0; Plants - 170; Viruses - 0; Other
Eukaryotes - 0 (source: NCBI BLink).		 -0.59 0.33 -0.32
38 AT3G16990 Haem oxygenase-like, multi-helical -0.58 0.28 -0.3
39 AT3G57260 beta-1,3-glucanase 2 AtPR2, BETA-1,3-GLUCANASE 2,
beta-1,3-glucanase 2,
PATHOGENESIS-RELATED PROTEIN 2,
PATHOGENESIS-RELATED PROTEIN 2		 -0.56 0.33 -0.32
40 AT2G39090 tetratricopeptide repeat (TPR)-containing protein anaphase-promoting complex 7,
AtAPC7		 -0.55 0.29 -0.34
41 AT4G16670 Plant protein of unknown function (DUF828) with plant
pleckstrin homology-like region		 -0.54 0.32 -0.3
42 AT5G63580 flavonol synthase 2 ATFLS2, flavonol synthase 2 -0.54 0.32 -0.33
43 AT4G19670 RING/U-box superfamily protein -0.54 0.31 -0.32
44 AT3G45530 Cysteine/Histidine-rich C1 domain family protein -0.54 0.3 -0.31
45 AT3G02980 MEIOTIC CONTROL OF CROSSOVERS1 MEIOTIC CONTROL OF CROSSOVERS1 -0.52 0.33 -0.33
46 AT2G05820 transposable element gene -0.52 0.32 -0.32
47 AT3G52430 alpha/beta-Hydrolases superfamily protein ARABIDOPSIS PHYTOALEXIN DEFICIENT
4, PHYTOALEXIN DEFICIENT 4		 -0.5 0.31 -0.3
Metabolite information
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  CID Metabolite name Pathway Information Correlation link
Compound name Stereochemistry Aracyc name pcc 2.5% 97.5% PPI
48 C0079 Digalactosyldiacylglycerol-34:5 - Digalactosyldiacylglycerol-34:5 triacylglycerol degradation,
linoleate biosynthesis I,
glycolipid biosynthesis,
glutathione redox reactions I 		0.66 0.46 -0.46 C0079
49 C0196 Phosphatidylcholine-34:3 - Phosphatidylcholine-34:3 choline biosynthesis III,
diacylglycerol biosynthesis,
phospholipases,
triacylglycerol biosynthesis,
linoleate biosynthesis I,
phosphatidylcholine biosynthesis III,
glutathione redox reactions I 		0.62 0.46 -0.46 C0196
50 C0213 PR_MST_2410.2 - - - 0.61 0.44 -0.45
51 C0089 Fortunellin - - - 0.61 0.45 -0.46