AT4G18180 : -
Query Information
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AGICode AT4G18180
Description Pectin lyase-like superfamily protein
Gene information
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  Gene Code Description / Information Gene name Correlation link
pcc 2.5% 97.5% PPI
1 AT4G18180 Pectin lyase-like superfamily protein 1 0.34 -0.32
2 AT5G24440 CTC-interacting domain 13 CTC-interacting domain 13 -0.68 0.34 -0.32
3 AT2G06310 transposable element gene -0.66 0.31 -0.31
4 AT1G75250 RAD-like 6 RAD-like 6, RAD-like 6,
RADIALIS-LIKE SANT/MYB 3		 0.66 0.33 -0.32
5 AT1G35790 transposable element gene 0.65 0.34 -0.32
6 AT3G16550 DEGP protease 12 DEGP protease 12 0.65 0.34 -0.31
7 AT3G23130 C2H2 and C2HC zinc fingers superfamily protein FLORAL DEFECTIVE 10, FLORAL ORGAN
NUMBER 1, SUPERMAN		 -0.63 0.32 -0.32
8 AT3G20030 F-box and associated interaction domains-containing protein -0.63 0.34 -0.33
9 AT1G16380 Cation/hydrogen exchanger family protein ATCHX1, CATION EXCHANGER 1 0.63 0.32 -0.31
10 AT5G38440 Plant self-incompatibility protein S1 family -0.63 0.34 -0.31
11 AT3G24360 ATP-dependent caseinolytic (Clp) protease/crotonase family
protein		 -0.62 0.32 -0.31
12 AT4G03750 transposable element gene 0.62 0.32 -0.31
13 AT1G01990 unknown protein; Has 32 Blast hits to 32 proteins in 6
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 32; Viruses - 0; Other Eukaryotes - 0 (source:
NCBI BLink).		 0.61 0.33 -0.29
14 AT2G07320 transposable element gene 0.6 0.32 -0.32
15 AT5G60410 DNA-binding protein with MIZ/SP-RING zinc finger,
PHD-finger and SAP domain		 ATSIZ1, SIZ1 0.59 0.34 -0.3
16 AT5G63320 nuclear protein X1 nuclear protein X1 0.59 0.34 -0.32
17 AT3G25810 Terpenoid cyclases/Protein prenyltransferases superfamily
protein		 -0.58 0.33 -0.3
18 AT2G34580 CONTAINS InterPro DOMAIN/s: Herpesvirus UL139,
cytomegalovirus (InterPro:IPR021042); Has 30201 Blast hits
to 17322 proteins in 780 species: Archae - 12; Bacteria -
1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses
- 0; Other Eukaryotes - 2996 (source: NCBI BLink).		 -0.58 0.31 -0.29
19 AT1G68700 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT1G26140.1); Has 14 Blast hits
to 14 proteins in 4 species: Archae - 0; Bacteria - 0;
Metazoa - 0; Fungi - 0; Plants - 14; Viruses - 0; Other
Eukaryotes - 0 (source: NCBI BLink).		 0.57 0.29 -0.32
20 AT1G48940 early nodulin-like protein 6 AtENODL6, early nodulin-like
protein 6		 -0.57 0.29 -0.33
21 AT4G02195 syntaxin of plants 42 ATSYP42, ATTLG2B, syntaxin of
plants 42, TLG2B		 -0.57 0.31 -0.32
22 AT5G58810 subtilisin-like serine protease, pseudogene, contains
similarity to prepro-cucumisin GI:807698 from (Cucumis
melo); non-consensus acceptor site AA at exon 6; blastp
match of 43% identity and 2.1e-113 P-value to
GP|13325079|gb|AAD02075.3||AF036960 subtilisin-like
protease C1 {Glycine max}		 -0.57 0.31 -0.3
23 AT3G30150 transposable element gene -0.57 0.3 -0.32
24 AT3G09140 Protein of unknown function (DUF674) -0.56 0.32 -0.32
25 AT2G22800 Homeobox-leucine zipper protein family HAT9 0.56 0.3 -0.33
26 AT1G68640 bZIP transcription factor family protein PERIANTHIA -0.56 0.31 -0.32
27 AT1G49015 DPP6 N-terminal domain-like protein 0.55 0.3 -0.3
28 AT2G31500 calcium-dependent protein kinase 24 calcium-dependent protein kinase
24		 -0.55 0.31 -0.34
29 AT3G30190 transposable element gene 0.55 0.32 -0.31
30 AT1G80740 chromomethylase 1 chromomethylase 1, DNA
METHYLTRANSFERASE 4		 -0.55 0.32 -0.29
31 AT2G03630 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT1G74220.1); Has 126 Blast hits
to 126 proteins in 28 species: Archae - 0; Bacteria - 6;
Metazoa - 7; Fungi - 5; Plants - 87; Viruses - 0; Other
Eukaryotes - 21 (source: NCBI BLink).		 -0.55 0.32 -0.34
32 AT4G15755 Calcium-dependent lipid-binding (CaLB domain) family
protein		 -0.54 0.32 -0.33
33 AT5G15010 Tetratricopeptide repeat (TPR)-like superfamily protein 0.54 0.32 -0.31
34 AT3G06280 F-box associated ubiquitination effector family protein -0.54 0.31 -0.32
35 AT1G65950 Protein kinase superfamily protein -0.54 0.32 -0.33
36 AT5G20560 Glycosyl hydrolase superfamily protein 0.54 0.34 -0.32
37 AT3G26940 Protein kinase superfamily protein CONSTITUTIVE DIFFERENTIAL GROWTH 1 -0.54 0.31 -0.3
38 AT2G29250 Concanavalin A-like lectin protein kinase family protein -0.54 0.33 -0.31
39 AT5G67550 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
endomembrane system; EXPRESSED IN: flower; EXPRESSED
DURING: 4 anthesis; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT1G71110.1); Has 161 Blast hits
to 154 proteins in 16 species: Archae - 0; Bacteria - 0;
Metazoa - 0; Fungi - 0; Plants - 161; Viruses - 0; Other
Eukaryotes - 0 (source: NCBI BLink).		 0.54 0.32 -0.29
40 AT3G60470 Plant protein of unknown function (DUF247) -0.54 0.33 -0.32
41 AT3G42990 unknown protein; Has 1 Blast hits to 1 proteins in 1
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 1; Viruses - 0; Other Eukaryotes - 0 (source: NCBI
BLink).		 -0.53 0.32 -0.33
42 AT5G53840 F-box/RNI-like/FBD-like domains-containing protein -0.53 0.32 -0.29
43 AT1G04180 YUCCA 9 YUCCA 9 0.53 0.31 -0.3
44 AT4G28900 transposable element gene -0.53 0.31 -0.32
45 AT1G29770 Haloacid dehalogenase-like hydrolase (HAD) superfamily
protein		 -0.53 0.31 -0.31
46 AT3G45940 Glycosyl hydrolases family 31 protein -0.52 0.32 -0.32
47 AT2G34940 VACUOLAR SORTING RECEPTOR 5 binding protein of 80 kDa 3;2,
VACUOLAR SORTING RECEPTOR 3;2,
VACUOLAR SORTING RECEPTOR 5		 -0.52 0.32 -0.32
48 AT2G39950 unknown protein; Has 978 Blast hits to 254 proteins in 81
species: Archae - 0; Bacteria - 8; Metazoa - 109; Fungi -
53; Plants - 41; Viruses - 0; Other Eukaryotes - 767
(source: NCBI BLink).		 0.52 0.31 -0.29
49 AT1G60380 NAC (No Apical Meristem) domain transcriptional regulator
superfamily protein		 -0.52 0.3 -0.34
50 AT1G05880 RING/U-box superfamily protein ARIADNE 12, ARABIDOPSIS ARIADNE 12 -0.52 0.32 -0.31
51 AT2G23250 UDP-glucosyl transferase 84B2 UDP-glucosyl transferase 84B2 0.52 0.32 -0.31
52 AT1G62530 Plant protein of unknown function (DUF863) 0.52 0.3 -0.32
53 AT3G28030 5'-3' exonuclease family protein ULTRAVIOLET HYPERSENSITIVE 3, UV
REPAIR DEFECTIVE 1		 -0.51 0.32 -0.31
54 AT2G47280 Pectin lyase-like superfamily protein -0.51 0.34 -0.31
55 AT5G61120 BEST Arabidopsis thaliana protein match is: Polynucleotidyl
transferase, ribonuclease H-like superfamily protein
(TAIR:AT5G61090.1); Has 125 Blast hits to 115 proteins in
16 species: Archae - 0; Bacteria - 0; Metazoa - 22; Fungi -
0; Plants - 102; Viruses - 0; Other Eukaryotes - 1 (source:
NCBI BLink).		 -0.51 0.31 -0.32
56 AT5G52670 Copper transport protein family 0.51 0.31 -0.3
57 AT4G16050 Aminotransferase-like, plant mobile domain family protein 0.51 0.28 -0.33
58 AT4G08250 GRAS family transcription factor -0.51 0.3 -0.31
59 AT1G13890 soluble N-ethylmaleimide-sensitive factor adaptor protein
30		 ATSNAP30, soluble
N-ethylmaleimide-sensitive factor
adaptor protein 30		 0.5 0.3 -0.3
60 AT5G45560 Pleckstrin homology (PH) domain-containing protein /
lipid-binding START domain-containing protein		 -0.5 0.32 -0.32
61 AT1G16705 p300/CBP acetyltransferase-related protein-related -0.5 0.31 -0.31
62 AT5G28210 mRNA capping enzyme family protein -0.5 0.32 -0.32
63 AT3G42340 transposable element gene -0.5 0.32 -0.3
64 AT3G30560 transposable element gene -0.5 0.32 -0.35
65 AT2G21655 Protein of unknown function (DUF784) -0.5 0.31 -0.33
66 AT4G07425 transposable element gene 0.5 0.33 -0.32
67 AT1G18530 EF hand calcium-binding protein family -0.5 0.3 -0.3
68 AT5G60320 Concanavalin A-like lectin protein kinase family protein -0.49 0.31 -0.32
69 AT1G16290 FUNCTIONS IN: molecular_function unknown; INVOLVED IN:
biological_process unknown; LOCATED IN: chloroplast,
vacuole; EXPRESSED IN: 19 plant structures; EXPRESSED
DURING: 11 growth stages; CONTAINS InterPro DOMAIN/s: Lytic
transglycosylase-like, catalytic (InterPro:IPR008258); Has
171 Blast hits to 155 proteins in 40 species: Archae - 0;
Bacteria - 54; Metazoa - 0; Fungi - 0; Plants - 55; Viruses
- 0; Other Eukaryotes - 62 (source: NCBI BLink).		 -0.49 0.32 -0.3
70 AT2G03190 SKP1-like 16 SKP1-like 16, SKP1-like 16 0.49 0.33 -0.31
71 AT3G48950 Pectin lyase-like superfamily protein -0.49 0.34 -0.33
72 AT2G28010 Eukaryotic aspartyl protease family protein 0.49 0.28 -0.33
73 AT5G46660 protein kinase C-like zinc finger protein 0.49 0.32 -0.34
74 AT4G15590 transposable element gene -0.49 0.31 -0.32
75 AT5G35390 Leucine-rich repeat protein kinase family protein -0.48 0.32 -0.3
76 AT1G27640 Putative role in leaf development. Comparison of
SALK_123839C to Columbia under normal growth conditions
resulted in a trend toward increased leaf length in the
mutant (P=0.13; median 22 for mutant,17 for Columbia) (Ann
Stapleton and Delita Pardue, 2009, personal communication).		 0.48 0.32 -0.34
77 AT4G20800 FAD-binding Berberine family protein 0.48 0.34 -0.32
78 AT3G18460 PLAC8 family protein 0.48 0.3 -0.3
79 AT5G25070 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
cellular_component unknown; EXPRESSED IN: 23 plant
structures; EXPRESSED DURING: 13 growth stages; Has 1807
Blast hits to 1807 proteins in 277 species: Archae - 0;
Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385;
Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).		 0.48 0.32 -0.31
80 AT4G04170 transposable element gene -0.48 0.32 -0.33
81 AT2G23470 Protein of unknown function, DUF647 ROOT UV-B SENSITIVE 4 -0.48 0.3 -0.32
82 AT3G52160 3-ketoacyl-CoA synthase 15 3-ketoacyl-CoA synthase 15 -0.47 0.36 -0.29
83 AT1G64010 Serine protease inhibitor (SERPIN) family protein 0.47 0.33 -0.31
84 AT3G42300 transposable element gene -0.47 0.32 -0.31
85 AT5G43822 Pentatricopeptide repeat (PPR) superfamily protein -0.47 0.33 -0.33
86 AT1G55990 glycine-rich protein -0.46 0.31 -0.32
87 AT4G17620 glycine-rich protein -0.46 0.29 -0.32
88 AT2G35570 pseudogene, serpin (serine protease inhibitor) family,
similar to phloem serpin-1 (Cucurbita maxima) GI:9937311;
blastp match of 49% identity and 9.9e-85 P-value to
GP|26224736|gb|AAN76362.1||AY158152 serpin-like protein
{Citrus x paradisi}		 -0.46 0.31 -0.31
89 AT2G37910 cation/hydrogen exchanger, putative (CHX21) -0.46 0.3 -0.32
90 AT4G23080 Protein of Unknown Function (DUF239) 0.46 0.33 -0.31
91 AT5G52480 RNI-like superfamily protein 0.46 0.33 -0.3
92 AT5G25180 cytochrome P450, family 71, subfamily B, polypeptide 14 cytochrome P450, family 71,
subfamily B, polypeptide 14		 0.46 0.32 -0.31
93 AT3G42480 transposable element gene 0.45 0.33 -0.32
Metabolite information
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  CID Metabolite name Pathway Information Correlation link
Compound name Stereochemistry Aracyc name pcc 2.5% 97.5% PPI
94 C0192 Oxalic acid - Oxalate ascorbate degradation -0.69 0.47 -0.45 C0192
95 C0035 4-Methoxyindol-3-ylmethylglucosinolate - 4-Methoxy-3-indolylmethyl glucosinolate glucosinolate biosynthesis from tryptophan,
indole glucosinolate breakdown (active in intact plant cell) 		0.6 0.46 -0.46 C0035
96 C0122 Isohexylglucosinolate - - - 0.57 0.3 -0.29