AT4G18410 : -
Query Information
Cytoscape Web will replace the contents of this div with your graph.
AGICode AT4G18410
Description transposable element gene
Gene information
Help   
  Gene Code Description / Information Gene name Correlation link
pcc 2.5% 97.5% PPI
1 AT4G18410 transposable element gene 1 0.33 -0.3
2 AT4G25350 EXS (ERD1/XPR1/SYG1) family protein SHORT HYPOCOTYL UNDER BLUE1 0.71 0.31 -0.3
3 AT1G36910 transposable element gene -0.69 0.32 -0.33
4 AT5G12180 calcium-dependent protein kinase 17 calcium-dependent protein kinase
17		 0.69 0.33 -0.32
5 AT3G32100 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
chloroplast; Has 1 Blast hits to 1 proteins in 1 species:
Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants -
1; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).		 -0.69 0.29 -0.3
6 AT5G04880 pseudogene of ABC transporter family protein 0.68 0.31 -0.3
7 AT1G11040 HSP40/DnaJ peptide-binding protein -0.68 0.32 -0.3
8 AT2G29770 Galactose oxidase/kelch repeat superfamily protein 0.68 0.33 -0.3
9 AT5G42400 SET domain protein 25 ARABIDOPSIS TRITHORAX-RELATED7,
SET domain protein 25		 0.68 0.3 -0.32
10 AT4G07460 transposable element gene -0.68 0.31 -0.34
11 AT3G13674 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
chloroplast; EXPRESSED IN: 17 plant structures; EXPRESSED
DURING: 11 growth stages; BEST Arabidopsis thaliana protein
match is: unknown protein (TAIR:AT1G55205.1); Has 76 Blast
hits to 76 proteins in 10 species: Archae - 0; Bacteria -
0; Metazoa - 0; Fungi - 0; Plants - 76; Viruses - 0; Other
Eukaryotes - 0 (source: NCBI BLink).		 -0.67 0.3 -0.3
12 AT1G09550 Pectinacetylesterase family protein 0.67 0.32 -0.3
13 AT5G09310 CONTAINS InterPro DOMAIN/s: Gamma-secretase aspartyl
protease complex, presenilin enhancer-2 subunit
(InterPro:IPR019379); Has 168 Blast hits to 168 proteins in
71 species: Archae - 0; Bacteria - 0; Metazoa - 126; Fungi
- 0; Plants - 36; Viruses - 0; Other Eukaryotes - 6
(source: NCBI BLink).		 -0.67 0.33 -0.29
14 AT1G47280 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
endomembrane system; EXPRESSED IN: 9 plant structures;
EXPRESSED DURING: L mature pollen stage, M germinated
pollen stage, 4 anthesis, C globular stage, petal
differentiation and expansion stage; Has 6 Blast hits to 6
proteins in 2 species: Archae - 0; Bacteria - 0; Metazoa -
0; Fungi - 0; Plants - 6; Viruses - 0; Other Eukaryotes - 0
(source: NCBI BLink).		 0.67 0.31 -0.3
15 AT5G22540 Plant protein of unknown function (DUF247) 0.67 0.3 -0.32
16 AT3G24790 Protein kinase superfamily protein 0.67 0.33 -0.32
17 AT3G42530 transposable element gene 0.66 0.32 -0.31
18 AT3G46390 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT1G32337.1); Has 5 Blast hits to
5 proteins in 1 species: Archae - 0; Bacteria - 0; Metazoa
- 0; Fungi - 0; Plants - 5; Viruses - 0; Other Eukaryotes -
0 (source: NCBI BLink).		 0.66 0.32 -0.29
19 AT1G23750 Nucleic acid-binding, OB-fold-like protein -0.65 0.34 -0.31
20 AT1G16710 histone acetyltransferase of the CBP family 12 histone acetyltransferase of the
CBP family 12		 0.65 0.32 -0.32
21 AT5G51700 protein binding;zinc ion binding ATRAR1, PPHB SUSCEPTIBLE 2,
Required for Mla12 resistance 1,
RPR2		 -0.65 0.31 -0.31
22 AT3G55460 SC35-like splicing factor 30 SC35-like splicing factor 30,
SC35-like splicing factor 30		 -0.65 0.3 -0.31
23 AT2G48060 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
endomembrane system; EXPRESSED IN: shoot, sperm cell;
CONTAINS InterPro DOMAIN/s: Protein of unknown function
DUF3595 (InterPro:IPR021999); Has 533 Blast hits to 341
proteins in 95 species: Archae - 2; Bacteria - 15; Metazoa
- 318; Fungi - 0; Plants - 93; Viruses - 0; Other
Eukaryotes - 105 (source: NCBI BLink).		 0.65 0.31 -0.33
24 AT4G21130 Transducin/WD40 repeat-like superfamily protein EMBRYO DEFECTIVE 2271 -0.65 0.31 -0.32
25 AT2G23310 Rer1 family protein ATRER1C1 -0.65 0.33 -0.31
26 AT1G32230 WWE protein-protein interaction domain protein family ARABIDOPSIS THALIANA P8
(INTERACTING PROTEIN), AtRCD1,
CEO, CEO1, RADICAL-INDUCED CELL
DEATH1		 0.65 0.31 -0.33
27 AT1G27520 Glycosyl hydrolase family 47 protein 0.65 0.31 -0.31
28 AT2G24255 unknown protein; CONTAINS InterPro DOMAIN/s: Protein of
unknown function DUF295 (InterPro:IPR005174); BEST
Arabidopsis thaliana protein match is: Protein of unknown
function (DUF295) (TAIR:AT1G64840.1); Has 124 Blast hits to
121 proteins in 7 species: Archae - 0; Bacteria - 0;
Metazoa - 0; Fungi - 0; Plants - 124; Viruses - 0; Other
Eukaryotes - 0 (source: NCBI BLink).		 0.64 0.32 -0.31
29 AT1G57780 heavy-metal-associated domain-containing protein -0.64 0.32 -0.29
30 AT4G10810 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
chloroplast; EXPRESSED IN: 23 plant structures; EXPRESSED
DURING: 15 growth stages; BEST Arabidopsis thaliana protein
match is: unknown protein (TAIR:AT4G24026.1); Has 1807
Blast hits to 1807 proteins in 277 species: Archae - 0;
Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385;
Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).		 -0.64 0.3 -0.3
31 AT3G42460 transposable element gene 0.63 0.31 -0.29
32 AT5G17480 pollen calcium-binding protein 1 pollen calcium-binding protein 1,
pollen calcium-binding protein 1		 -0.63 0.32 -0.32
33 AT2G14835 RING/U-box superfamily protein -0.63 0.35 -0.34
34 AT3G42700 transposable element gene 0.63 0.3 -0.29
35 AT5G23770 DOMAIN OF UNKNOWN FUNCTION 724 8 DOMAIN OF UNKNOWN FUNCTION 724 8,
DOMAIN OF UNKNOWN FUNCTION 724 8		 0.63 0.33 -0.31
36 AT2G07650 transposable element gene 0.63 0.3 -0.32
37 AT5G28880 transposable element gene 0.63 0.29 -0.33
38 AT3G47230 transposable element gene -0.62 0.33 -0.3
39 AT4G20200 Terpenoid cyclases/Protein prenyltransferases superfamily
protein		 0.62 0.31 -0.3
40 AT2G19130 S-locus lectin protein kinase family protein 0.62 0.32 -0.33
41 AT1G74220 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
chloroplast; EXPRESSED IN: male gametophyte, flower, pollen
tube; EXPRESSED DURING: L mature pollen stage, M germinated
pollen stage, 4 anthesis; BEST Arabidopsis thaliana protein
match is: unknown protein (TAIR:AT2G03630.1); Has 383 Blast
hits to 347 proteins in 86 species: Archae - 0; Bacteria -
17; Metazoa - 87; Fungi - 65; Plants - 76; Viruses - 2;
Other Eukaryotes - 136 (source: NCBI BLink).		 -0.62 0.32 -0.32
42 AT3G05020 acyl carrier protein 1 ACYL CARRIER PROTEIN, acyl carrier
protein 1		 -0.62 0.32 -0.31
43 AT2G15860 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
cellular_component unknown; EXPRESSED IN: 24 plant
structures; EXPRESSED DURING: 13 growth stages; Has 30201
Blast hits to 17322 proteins in 780 species: Archae - 12;
Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants -
5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI
BLink).		 -0.62 0.32 -0.32
44 AT5G59910 Histone superfamily protein HTB4 -0.62 0.31 -0.3
45 AT2G25740 ATP-dependent protease La (LON) domain protein 0.62 0.32 -0.32
46 AT3G46070 C2H2-type zinc finger family protein 0.62 0.32 -0.31
47 AT3G29690 HXXXD-type acyl-transferase family protein -0.62 0.31 -0.31
48 AT1G52570 phospholipase D alpha 2 phospholipase D alpha 2 0.62 0.32 -0.3
49 AT1G70180 Sterile alpha motif (SAM) domain-containing protein 0.62 0.34 -0.33
50 AT5G39785 Protein of unknown function (DUF1666) 0.62 0.31 -0.33
51 AT3G06990 Cysteine/Histidine-rich C1 domain family protein -0.62 0.33 -0.31
52 AT4G36980 FUNCTIONS IN: molecular_function unknown; INVOLVED IN:
biological_process unknown; EXPRESSED IN: 23 plant
structures; EXPRESSED DURING: 13 growth stages; CONTAINS
InterPro DOMAIN/s: Splicing factor, suppressor of white
apricot (InterPro:IPR019147); Has 7672 Blast hits to 5479
proteins in 321 species: Archae - 0; Bacteria - 89; Metazoa
- 5155; Fungi - 712; Plants - 341; Viruses - 39; Other
Eukaryotes - 1336 (source: NCBI BLink).		 0.62 0.32 -0.3
53 AT2G16190 BEST Arabidopsis thaliana protein match is:
hydroxyproline-rich glycoprotein family protein
(TAIR:AT1G49330.1); Has 77 Blast hits to 77 proteins in 25
species: Archae - 0; Bacteria - 0; Metazoa - 6; Fungi - 13;
Plants - 56; Viruses - 0; Other Eukaryotes - 2 (source:
NCBI BLink).		 0.62 0.31 -0.31
54 AT1G48270 G-protein-coupled receptor 1 G-protein-coupled receptor 1 -0.61 0.31 -0.3
55 AT5G51870 AGAMOUS-like 71 AGAMOUS-like 71 0.61 0.34 -0.31
56 AT1G02260 Divalent ion symporter 0.61 0.31 -0.32
57 AT5G07480 KAR-UP oxidoreductase 1 KAR-UP oxidoreductase 1 0.61 0.3 -0.33
58 AT5G38610 Plant invertase/pectin methylesterase inhibitor superfamily
protein		 -0.61 0.31 -0.3
59 AT2G10050 transposable element gene 0.61 0.29 -0.29
60 AT3G09530 exocyst subunit exo70 family protein H3 exocyst subunit exo70 family
protein H3, exocyst subunit exo70
family protein H3		 0.61 0.32 -0.33
61 AT2G23860 pseudogene, similar to VAP27, blastp match of 56% identity
and 1.3e-25 P-value to GP|6688926|emb|CAB65313.1||AJ251365
VAP27 {Nicotiana plumbaginifolia}		 0.61 0.31 -0.3
62 AT2G38480 Uncharacterised protein family (UPF0497) -0.61 0.34 -0.3
63 AT2G26420 1-phosphatidylinositol-4-phosphate 5-kinase 3 1-phosphatidylinositol-4-phosphate
5-kinase 3		 -0.61 0.3 -0.32
64 AT5G35550 Duplicated homeodomain-like superfamily protein MYB DOMAIN PROTEIN 123, ATTT2, MYB
DOMAIN PROTEIN 123, TRANSPARENT
TESTA 2		 -0.61 0.3 -0.31
65 AT1G73720 transducin family protein / WD-40 repeat family protein SUPPRESSORS OF MEC-8 AND UNC-52 1 -0.6 0.34 -0.32
66 AT5G58580 TOXICOS EN LEVADURA 63 TOXICOS EN LEVADURA 63, TOXICOS EN
LEVADURA 63		 -0.6 0.3 -0.33
67 AT1G20400 Protein of unknown function (DUF1204) -0.6 0.3 -0.32
68 AT4G24580 Rho GTPase activation protein (RhoGAP) with PH domain ROP1 ENHANCER 1 -0.6 0.33 -0.34
69 AT2G21780 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT4G39360.1); Has 13 Blast hits
to 13 proteins in 2 species: Archae - 0; Bacteria - 0;
Metazoa - 0; Fungi - 0; Plants - 13; Viruses - 0; Other
Eukaryotes - 0 (source: NCBI BLink).		 -0.6 0.34 -0.31
70 AT1G27160 valyl-tRNA synthetase / valine--tRNA ligase-related -0.6 0.31 -0.34
71 AT1G13200 F-box and associated interaction domains-containing protein 0.6 0.32 -0.31
72 AT3G20580 COBRA-like protein 10 precursor COBRA-like protein 10 precursor -0.6 0.32 -0.33
73 AT1G70460 root hair specific 10 proline-rich extensin-like
receptor kinase 13, proline-rich
extensin-like receptor kinase 13,
root hair specific 10		 -0.6 0.31 -0.32
74 AT3G26160 cytochrome P450, family 71, subfamily B, polypeptide 17 cytochrome P450, family 71,
subfamily B, polypeptide 17		 0.6 0.32 -0.32
75 AT5G04200 metacaspase 9 metacaspase 9, metacaspase 2f,
metacaspase 9, metacaspase 2f		 -0.59 0.33 -0.3
76 AT3G07150 unknown protein; Has 19 Blast hits to 19 proteins in 8
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 19; Viruses - 0; Other Eukaryotes - 0 (source:
NCBI BLink).		 0.59 0.28 -0.31
77 AT4G28370 RING/U-box superfamily protein 0.59 0.32 -0.32
78 AT3G07000 Cysteine/Histidine-rich C1 domain family protein -0.59 0.31 -0.32
79 AT5G07430 Pectin lyase-like superfamily protein -0.59 0.32 -0.3
80 AT5G04050 RNA-directed DNA polymerase (reverse transcriptase) 0.59 0.33 -0.34
81 AT3G19610 Plant protein of unknown function (DUF936) -0.59 0.32 -0.3
82 AT2G27980 Acyl-CoA N-acyltransferase with RING/FYVE/PHD-type zinc
finger domain		 0.59 0.32 -0.32
83 AT1G17010 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase
superfamily protein		 0.58 0.29 -0.33
84 AT3G54310 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT2G38430.1); Has 44 Blast hits
to 41 proteins in 9 species: Archae - 0; Bacteria - 0;
Metazoa - 0; Fungi - 0; Plants - 44; Viruses - 0; Other
Eukaryotes - 0 (source: NCBI BLink).		 -0.58 0.31 -0.31
85 AT5G05080 ubiquitin-conjugating enzyme 22 ATUBC22, ubiquitin-conjugating
enzyme 22		 -0.58 0.31 -0.33
86 AT4G26260 myo-inositol oxygenase 4 myo-inositol oxygenase 4 -0.58 0.31 -0.32
87 AT4G25550 Cleavage/polyadenylation specificity factor, 25kDa subunit -0.58 0.32 -0.31
88 AT1G26260 cryptochrome-interacting basic-helix-loop-helix 5 cryptochrome-interacting
basic-helix-loop-helix 5		 0.58 0.32 -0.29
89 AT2G06500 hAT family dimerisation domain -0.58 0.32 -0.31
90 AT1G27650 U2 snRNP auxiliary factor small subunit, putative ATU2AF35A -0.57 0.3 -0.29
91 AT2G04063 glycine-rich protein -0.57 0.3 -0.28
92 AT5G65370 ENTH/ANTH/VHS superfamily protein -0.57 0.32 -0.32
93 AT1G48330 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT3G17580.1); Has 40 Blast hits
to 40 proteins in 11 species: Archae - 0; Bacteria - 0;
Metazoa - 0; Fungi - 0; Plants - 40; Viruses - 0; Other
Eukaryotes - 0 (source: NCBI BLink).		 -0.57 0.31 -0.32
94 AT5G38380 FUNCTIONS IN: molecular_function unknown; INVOLVED IN:
biological_process unknown; LOCATED IN: membrane; EXPRESSED
IN: 22 plant structures; EXPRESSED DURING: 14 growth
stages; CONTAINS InterPro DOMAIN/s: Protein of unknown
function DUF6, transmembrane (InterPro:IPR000620); BEST
Arabidopsis thaliana protein match is: Cation efflux family
protein (TAIR:AT2G04620.1); Has 123 Blast hits to 121
proteins in 39 species: Archae - 0; Bacteria - 0; Metazoa -
69; Fungi - 0; Plants - 45; Viruses - 0; Other Eukaryotes -
9 (source: NCBI BLink).		 -0.57 0.31 -0.32
95 AT5G46200 Protein of Unknown Function (DUF239) -0.57 0.3 -0.32
96 AT4G39860 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT2G22270.1); Has 152 Blast hits
to 146 proteins in 19 species: Archae - 0; Bacteria - 0;
Metazoa - 0; Fungi - 2; Plants - 146; Viruses - 0; Other
Eukaryotes - 4 (source: NCBI BLink).		 -0.57 0.31 -0.32
97 AT5G47150 YDG/SRA domain-containing protein -0.57 0.31 -0.31
98 AT2G38830 Ubiquitin-conjugating enzyme/RWD-like protein -0.57 0.32 -0.31
99 AT5G37900 TRAF-like superfamily protein -0.56 0.33 -0.31
100 AT5G07930 MEI2 C-terminal RRM only like 2 MEI2 C-terminal RRM only like 2 -0.56 0.3 -0.31
101 AT1G34410 auxin response factor 21 auxin response factor 21 -0.56 0.31 -0.33
102 AT5G06650 C2H2 and C2HC zinc fingers superfamily protein GLABROUS INFLORESCENCE STEMS 2 -0.56 0.34 -0.3
103 AT2G29620 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT1G07330.1); Has 887 Blast hits
to 750 proteins in 151 species: Archae - 2; Bacteria - 63;
Metazoa - 270; Fungi - 51; Plants - 111; Viruses - 6; Other
Eukaryotes - 384 (source: NCBI BLink).		 -0.56 0.33 -0.31
104 AT1G52240 RHO guanyl-nucleotide exchange factor 11 ATROPGEF11, phytochrome
interacting RopGEF 1, RHO
guanyl-nucleotide exchange factor
11		 -0.56 0.3 -0.3
105 AT4G19980 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
chloroplast; EXPRESSED IN: root, pedicel; EXPRESSED DURING:
4 anthesis; Has 30201 Blast hits to 17322 proteins in 780
species: Archae - 12; Bacteria - 1396; Metazoa - 17338;
Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes
- 2996 (source: NCBI BLink).		 -0.56 0.3 -0.3
106 AT1G21230 wall associated kinase 5 wall associated kinase 5 -0.56 0.33 -0.31
Metabolite information
Help   
  CID Metabolite name Pathway Information Correlation link
Compound name Stereochemistry Aracyc name pcc 2.5% 97.5% PPI
107 C0193 Pantothenic acid D,L-Pantothenic acid Pantothenate pantothenate biosynthesis 0.73 0.46 -0.47 C0193