AGICode | AT4G18450 |
Description | Integrase-type DNA-binding superfamily protein |
Gene Code | Description / Information | Gene name | Correlation | link | ||||
---|---|---|---|---|---|---|---|---|
pcc | 2.5% | 97.5% | PPI | |||||
1 | AT4G18450 | Integrase-type DNA-binding superfamily protein | 1 | 0.32 | -0.34 | |||
2 | AT4G30790 | INVOLVED IN: autophagy; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Autophagy-related protein 17 (InterPro:IPR007240), Autophagy-related protein 11 (InterPro:IPR019460); Has 8793 Blast hits to 6268 proteins in 570 species: Archae - 89; Bacteria - 657; Metazoa - 4844; Fungi - 808; Plants - 441; Viruses - 15; Other Eukaryotes - 1939 (source: NCBI BLink). |
-0.66 | 0.32 | -0.31 | |||
3 | AT3G44690 | unknown protein; Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). |
-0.59 | 0.29 | -0.31 | |||
4 | AT5G33300 | chromosome-associated kinesin-related | 0.59 | 0.32 | -0.32 | |||
5 | AT3G19500 | basic helix-loop-helix (bHLH) DNA-binding superfamily protein |
0.57 | 0.34 | -0.29 | |||
6 | AT3G60030 | squamosa promoter-binding protein-like 12 | squamosa promoter-binding protein-like 12 |
-0.57 | 0.32 | -0.32 | ||
7 | AT5G40970 | Protein of unknown function (DUF 3339) | -0.56 | 0.31 | -0.3 | |||
8 | AT4G03990 | transposable element gene | 0.56 | 0.31 | -0.31 | |||
9 | AT5G48060 | C2 calcium/lipid-binding plant phosphoribosyltransferase family protein |
-0.56 | 0.33 | -0.31 | |||
10 | AT3G58620 | tetratricopetide-repeat thioredoxin-like 4 | tetratricopetide-repeat thioredoxin-like 4 |
0.56 | 0.32 | -0.32 | ||
11 | AT3G02310 | K-box region and MADS-box transcription factor family protein |
AGAMOUS-like 4, SEPALLATA 2 | 0.55 | 0.32 | -0.33 | ||
12 | AT1G23270 | unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G31460.1); Has 901 Blast hits to 142 proteins in 59 species: Archae - 0; Bacteria - 69; Metazoa - 176; Fungi - 29; Plants - 28; Viruses - 0; Other Eukaryotes - 599 (source: NCBI BLink). |
-0.55 | 0.31 | -0.33 | |||
13 | AT1G36940 | unknown protein; Has 21 Blast hits to 21 proteins in 8 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 21; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). |
0.55 | 0.31 | -0.33 | |||
14 | AT5G14430 | S-adenosyl-L-methionine-dependent methyltransferases superfamily protein |
-0.55 | 0.33 | -0.31 | |||
15 | AT2G43660 | Carbohydrate-binding X8 domain superfamily protein | 0.55 | 0.32 | -0.32 | |||
16 | AT4G11110 | SPA1-related 2 | SPA1-related 2 | -0.54 | 0.33 | -0.31 | ||
17 | AT2G41250 | Haloacid dehalogenase-like hydrolase (HAD) superfamily protein |
0.54 | 0.3 | -0.33 | |||
18 | AT4G35540 | zinc ion binding;transcription regulators | -0.53 | 0.32 | -0.3 | |||
19 | AT1G63980 | D111/G-patch domain-containing protein | -0.53 | 0.31 | -0.32 | |||
20 | AT5G62900 | unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: N-terminal protein myristoylation; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 12 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G50090.1); Has 157 Blast hits to 157 proteins in 14 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 157; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). |
0.53 | 0.29 | -0.31 | |||
21 | AT2G23140 | RING/U-box superfamily protein with ARM repeat domain | -0.52 | 0.34 | -0.31 | |||
22 | AT1G54460 | TPX2 (targeting protein for Xklp2) protein family | 0.52 | 0.31 | -0.32 | |||
23 | AT2G05590 | TLD-domain containing nucleolar protein | -0.52 | 0.34 | -0.3 | |||
24 | AT1G71820 | SEC6 | SEC6 | -0.51 | 0.33 | -0.29 | ||
25 | AT4G12330 | cytochrome P450, family 706, subfamily A, polypeptide 7 | cytochrome P450, family 706, subfamily A, polypeptide 7 |
0.51 | 0.32 | -0.31 | ||
26 | AT2G23210 | UDP-Glycosyltransferase superfamily protein | -0.51 | 0.31 | -0.31 | |||
27 | AT1G06340 | Plant Tudor-like protein | -0.51 | 0.34 | -0.31 | |||
28 | AT1G22015 | Galactosyltransferase family protein | DD46 | 0.51 | 0.32 | -0.33 | ||
29 | AT5G39070 | transposable element gene | 0.5 | 0.3 | -0.33 | |||
30 | AT2G34090 | maternal effect embryo arrest 18 | maternal effect embryo arrest 18 | -0.5 | 0.31 | -0.32 | ||
31 | AT3G55780 | Glycosyl hydrolase superfamily protein | -0.5 | 0.33 | -0.31 | |||
32 | AT5G54620 | Ankyrin repeat family protein | 0.5 | 0.31 | -0.3 | |||
33 | AT4G05250 | Ubiquitin-like superfamily protein | 0.5 | 0.33 | -0.35 | |||
34 | AT2G28270 | Cysteine/Histidine-rich C1 domain family protein | -0.5 | 0.32 | -0.33 | |||
35 | AT1G10520 | DNA polymerase lambda (POLL) | AtPol{lambda}, DNA polymerase {lambda} |
0.5 | 0.31 | -0.31 | ||
36 | AT5G01740 | Nuclear transport factor 2 (NTF2) family protein | 0.5 | 0.3 | -0.31 | |||
37 | AT5G48570 | FKBP-type peptidyl-prolyl cis-trans isomerase family protein |
ATFKBP65, FKBP65, ROF2 | 0.49 | 0.34 | -0.32 | ||
38 | AT5G63760 | RING/U-box superfamily protein | ARIADNE 15, ARABIDOPSIS ARIADNE 15 | 0.49 | 0.32 | -0.32 | ||
39 | AT3G06360 | arabinogalactan protein 27 | arabinogalactan protein 27, ARABINOGALACTAN PROTEIN 27 |
0.49 | 0.35 | -0.32 | ||
40 | AT3G57260 | beta-1,3-glucanase 2 | AtPR2, BETA-1,3-GLUCANASE 2, beta-1,3-glucanase 2, PATHOGENESIS-RELATED PROTEIN 2, PATHOGENESIS-RELATED PROTEIN 2 |
0.49 | 0.3 | -0.31 | ||
41 | AT3G42400 | transposable element gene | 0.48 | 0.31 | -0.32 | |||
42 | AT5G18690 | arabinogalactan protein 25 | arabinogalactan protein 25, ARABIDOPSIS THALIANA ARABINOGALACTAN PROTEINS 25 |
0.48 | 0.32 | -0.3 | ||
43 | AT3G32917 | transposable element gene | 0.48 | 0.3 | -0.33 | |||
44 | AT4G40020 | Myosin heavy chain-related protein | 0.48 | 0.3 | -0.31 | |||
45 | AT5G56340 | RING/U-box superfamily protein | ATCRT1 | -0.48 | 0.32 | -0.32 | ||
46 | AT3G55400 | methionyl-tRNA synthetase / methionine--tRNA ligase / MetRS (cpMetRS) |
OVULE ABORTION 1 | -0.48 | 0.31 | -0.33 | ||
47 | AT5G09940 | Protein of unknown function (DUF1635) | 0.48 | 0.33 | -0.31 | |||
48 | AT5G20300 | Avirulence induced gene (AIG1) family protein | translocon at the outer envelope membrane of chloroplasts 90 |
-0.48 | 0.33 | -0.29 | ||
49 | AT5G58440 | sorting nexin 2A | sorting nexin 2A | -0.47 | 0.29 | -0.32 | ||
50 | AT5G45530 | Protein of unknown function (DUF594) | -0.47 | 0.35 | -0.31 | |||
51 | AT2G40770 | zinc ion binding;DNA binding;helicases;ATP binding;nucleic acid binding |
-0.47 | 0.33 | -0.31 | |||
52 | AT1G72410 | COP1-interacting protein-related | -0.47 | 0.31 | -0.32 | |||
53 | AT5G57940 | cyclic nucleotide gated channel 5 | cyclic nucleotide gated channel 5, cyclic nucleotide gated channel 5 |
-0.47 | 0.31 | -0.3 | ||
54 | AT1G76185 | unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G20460.1); Has 37 Blast hits to 37 proteins in 11 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 37; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). |
-0.47 | 0.33 | -0.3 | |||
55 | AT3G59870 | unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT2G43945.1); Has 292 Blast hits to 292 proteins in 84 species: Archae - 0; Bacteria - 122; Metazoa - 0; Fungi - 0; Plants - 46; Viruses - 0; Other Eukaryotes - 124 (source: NCBI BLink). |
-0.47 | 0.32 | -0.32 | |||
56 | AT4G39130 | Dehydrin family protein | -0.47 | 0.32 | -0.3 | |||
57 | AT5G06720 | peroxidase 2 | peroxidase 2, peroxidase 2 | 0.47 | 0.32 | -0.31 | ||
58 | AT3G19050 | phragmoplast orienting kinesin 2 | phragmoplast orienting kinesin 2 | 0.46 | 0.32 | -0.32 | ||
59 | AT5G61110 | zinc ion binding | 0.46 | 0.32 | -0.3 |
CID | Metabolite name | Pathway Information | Correlation | link | ||||||
---|---|---|---|---|---|---|---|---|---|---|
Compound name | Stereochemistry | Aracyc name | pcc | 2.5% | 97.5% | PPI | ||||
60 | C0074 | Cystine | L-Cystine | L-Cystine | protein precursor | -0.72 | 0.45 | -0.46 | ||
61 | C0072 | Cyanidin 3-O-[2''-O-(xylosyl) glucoside] 5-O-glucoside | - | - | - | -0.72 | 0.47 | -0.44 | ||
62 | C0196 | Phosphatidylcholine-34:3 | - | Phosphatidylcholine-34:3 | choline biosynthesis III, diacylglycerol biosynthesis, phospholipases, triacylglycerol biosynthesis, linoleate biosynthesis I, phosphatidylcholine biosynthesis III, glutathione redox reactions I |
-0.61 | 0.48 | -0.43 | ||
63 | C0080 | Digalactosyldiacylglycerol-34:6 | - | Digalactosyldiacylglycerol-34:6 | triacylglycerol degradation, linoleate biosynthesis I, glycolipid biosynthesis, glutathione redox reactions I |
-0.6 | 0.44 | -0.44 |