AT4G13850 : GLYCINE-RICH RNA-BINDING PROTEIN 2
Query Information
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AGICode AT4G13850
Description glycine-rich RNA-binding protein 2
Gene information
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  Gene Code Description / Information Gene name Correlation link
pcc 2.5% 97.5% PPI
1 AT4G13850 glycine-rich RNA-binding protein 2 GLYCINE-RICH RNA-BINDING PROTEIN
2, glycine-rich RNA-binding
protein 2, glycine rich protein 2		 1 0.31 -0.33
2 AT1G79150 binding 0.89 0.3 -0.31
3 AT4G28450 nucleotide binding;protein binding 0.87 0.32 -0.35
4 AT3G27280 prohibitin 4 prohibitin 4, prohibitin 4 0.86 0.33 -0.3
5 AT3G52040 unknown protein; Has 37 Blast hits to 37 proteins in 15
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 37; Viruses - 0; Other Eukaryotes - 0 (source:
NCBI BLink).		 0.86 0.3 -0.31
6 AT4G31790 Tetrapyrrole (Corrin/Porphyrin) Methylases 0.86 0.34 -0.32
7 AT3G60360 embryo sac development arrest 14 EMBRYO SAC DEVELOPMENT ARREST 14,
U3 SMALL NUCLEOLAR RNA-ASSOCIATED
PROTEIN 11		 0.86 0.31 -0.34
8 AT4G01560 Ribosomal RNA processing Brix domain protein maternal effect embryo arrest 49 0.85 0.31 -0.34
9 AT3G03060 P-loop containing nucleoside triphosphate hydrolases
superfamily protein		 0.85 0.31 -0.32
10 AT3G10530 Transducin/WD40 repeat-like superfamily protein 0.84 0.33 -0.3
11 AT2G33210 heat shock protein 60-2 heat shock protein 60-2 0.84 0.32 -0.34
12 AT5G55920 S-adenosyl-L-methionine-dependent methyltransferases
superfamily protein		 OLIGOCELLULA 2 0.84 0.31 -0.32
13 AT4G37090 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
cellular_component unknown; EXPRESSED IN: 23 plant
structures; EXPRESSED DURING: 13 growth stages; Has 30201
Blast hits to 17322 proteins in 780 species: Archae - 12;
Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants -
5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI
BLink).		 0.83 0.3 -0.31
14 AT5G61030 glycine-rich RNA-binding protein 3 glycine-rich RNA-binding protein 3 0.83 0.31 -0.31
15 AT5G06550 CONTAINS InterPro DOMAIN/s: Transcription factor
jumonji/aspartyl beta-hydroxylase (InterPro:IPR003347),
F-box domain, Skp2-like (InterPro:IPR022364), Transcription
factor jumonji (InterPro:IPR013129); BEST Arabidopsis
thaliana protein match is: transferases, transferring
glycosyl groups (TAIR:AT1G78280.1); Has 1762 Blast hits to
1747 proteins in 292 species: Archae - 0; Bacteria - 297;
Metazoa - 877; Fungi - 168; Plants - 221; Viruses - 0;
Other Eukaryotes - 199 (source: NCBI BLink).		 0.83 0.3 -0.33
16 AT1G56110 homolog of nucleolar protein NOP56 homolog of nucleolar protein NOP56 0.82 0.31 -0.31
17 AT1G15480 Tetratricopeptide repeat (TPR)-like superfamily protein 0.82 0.33 -0.3
18 AT1G31660 CONTAINS InterPro DOMAIN/s: Bystin (InterPro:IPR007955);
Has 475 Blast hits to 467 proteins in 210 species: Archae -
0; Bacteria - 9; Metazoa - 155; Fungi - 139; Plants - 55;
Viruses - 0; Other Eukaryotes - 117 (source: NCBI BLink).		 0.82 0.34 -0.3
19 AT1G30960 GTP-binding family protein 0.82 0.3 -0.29
20 AT1G14060 GCK domain-containing protein 0.81 0.32 -0.31
21 AT1G08580 unknown protein; Has 39 Blast hits to 39 proteins in 15
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 35; Viruses - 0; Other Eukaryotes - 4 (source:
NCBI BLink).		 0.81 0.32 -0.33
22 AT2G39795 Mitochondrial glycoprotein family protein 0.81 0.32 -0.31
23 AT3G01800 Ribosome recycling factor 0.81 0.33 -0.3
24 AT1G55900 Haloacid dehalogenase-like hydrolase (HAD) superfamily
protein		 embryo defective 1860, TIM50 0.81 0.32 -0.31
25 AT2G19385 zinc ion binding 0.8 0.32 -0.3
26 AT5G67630 P-loop containing nucleoside triphosphate hydrolases
superfamily protein		 0.8 0.33 -0.29
27 AT1G23100 GroES-like family protein 0.8 0.32 -0.31
28 AT2G20940 Protein of unknown function (DUF1279) 0.8 0.31 -0.3
29 AT2G19480 nucleosome assembly protein 1;2 nucleosome assembly protein 1;2,
NUCLEOSOME/CHROMATIN ASSEMBLY
FACTOR GROUP A 02,
NUCLEOSOME/CHROMATIN ASSEMBLY
FACTOR GROUP A 2		 0.8 0.32 -0.3
30 AT3G13160 Tetratricopeptide repeat (TPR)-like superfamily protein 0.8 0.33 -0.3
31 AT3G05060 NOP56-like pre RNA processing ribonucleoprotein 0.8 0.3 -0.32
32 AT5G39580 Peroxidase superfamily protein 0.79 0.31 -0.31
33 AT1G06560 NOL1/NOP2/sun family protein 0.79 0.31 -0.31
34 AT5G02050 Mitochondrial glycoprotein family protein 0.79 0.33 -0.32
35 AT5G19300 CONTAINS InterPro DOMAIN/s: Nucleic acid-binding,
OB-fold-like (InterPro:IPR016027), Protein of unknown
function DUF171 (InterPro:IPR003750); Has 3649 Blast hits
to 1964 proteins in 291 species: Archae - 113; Bacteria -
121; Metazoa - 1082; Fungi - 399; Plants - 227; Viruses -
4; Other Eukaryotes - 1703 (source: NCBI BLink).		 0.79 0.33 -0.31
36 AT1G75670 DNA-directed RNA polymerases 0.79 0.33 -0.32
37 AT1G52930 Ribosomal RNA processing Brix domain protein 0.79 0.33 -0.32
38 AT1G02870 FUNCTIONS IN: molecular_function unknown; INVOLVED IN:
biological_process unknown; EXPRESSED IN: 23 plant
structures; EXPRESSED DURING: 13 growth stages; CONTAINS
InterPro DOMAIN/s: Ribosome biogenesis protein Nop16
(InterPro:IPR019002); Has 104 Blast hits to 104 proteins in
57 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi -
63; Plants - 35; Viruses - 0; Other Eukaryotes - 6 (source:
NCBI BLink).		 0.79 0.31 -0.29
39 AT5G62290 nucleotide-sensitive chloride conductance regulator (ICln)
family protein		 0.79 0.3 -0.31
40 AT5G62440 Protein of unknown function (DUF3223) 0.79 0.3 -0.31
41 AT4G39260 cold, circadian rhythm, and RNA binding 1 GLYCINE-RICH PROTEIN 8, cold,
circadian rhythm, and RNA binding
1, glycine-rich RNA-binding
protein 8, GRP8		 0.79 0.31 -0.29
42 AT5G66540 FUNCTIONS IN: molecular_function unknown; INVOLVED IN: rRNA
processing; LOCATED IN: cytosol, nucleolus, nucleus;
EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 12
growth stages; CONTAINS InterPro DOMAIN/s: U3 small
nucleolar ribonucleoprotein complex, subunit Mpp10p
(InterPro:IPR012173), Mpp10 protein (InterPro:IPR007151);
Has 30201 Blast hits to 17322 proteins in 780 species:
Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi -
3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996
(source: NCBI BLink).		 0.78 0.32 -0.32
43 AT3G49320 Metal-dependent protein hydrolase 0.78 0.33 -0.31
44 AT5G57280 S-adenosyl-L-methionine-dependent methyltransferases
superfamily protein		 root initiation defective 2 0.78 0.31 -0.29
45 AT2G29540 RNApolymerase 14 kDa subunit ATRPAC14, RNApolymerase 14 kDa
subunit, RNApolymerase 14 kDa
subunit		 0.78 0.34 -0.3
46 AT3G55620 Translation initiation factor IF6 eukaryotic initiation facor 6A,
embryo defective 1624		 0.78 0.3 -0.3
47 AT5G20400 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase
superfamily protein		 0.78 0.32 -0.31
48 AT5G48070 xyloglucan endotransglucosylase/hydrolase 20 XYLOGLUCAN
ENDOTRANSGLUCOSYLASE/HYDROLASE 20,
xyloglucan
endotransglucosylase/hydrolase 20		 0.78 0.31 -0.33
49 AT5G11630 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED
DURING: 13 growth stages; BEST Arabidopsis thaliana protein
match is: unknown protein (TAIR:AT4G17310.1); Has 90 Blast
hits to 90 proteins in 10 species: Archae - 0; Bacteria -
0; Metazoa - 0; Fungi - 0; Plants - 90; Viruses - 0; Other
Eukaryotes - 0 (source: NCBI BLink).		 0.78 0.29 -0.32
50 AT3G55605 Mitochondrial glycoprotein family protein 0.78 0.31 -0.32
51 AT1G53645 hydroxyproline-rich glycoprotein family protein 0.78 0.3 -0.33
52 AT2G44510 CDK inhibitor P21 binding protein 0.78 0.31 -0.31
53 AT4G15640 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT3G21465.1); Has 38 Blast hits
to 38 proteins in 14 species: Archae - 0; Bacteria - 0;
Metazoa - 0; Fungi - 0; Plants - 38; Viruses - 0; Other
Eukaryotes - 0 (source: NCBI BLink).		 0.78 0.33 -0.3
54 AT3G21540 transducin family protein / WD-40 repeat family protein 0.78 0.31 -0.33
55 AT1G10270 glutamine-rich protein 23 glutamine-rich protein 23 0.77 0.31 -0.34
56 AT5G41010 DNA directed RNA polymerase, 7 kDa subunit NRPB12, NRPD12, NRPE12 0.77 0.33 -0.31
57 AT3G13860 heat shock protein 60-3A heat shock protein 60-3A 0.77 0.32 -0.32
58 AT3G23990 heat shock protein 60 heat shock protein 60, HEAT SHOCK
PROTEIN 60-3B		 0.77 0.3 -0.32
59 AT5G40770 prohibitin 3 prohibitin 3, prohibitin 3 0.77 0.33 -0.31
60 AT1G15740 Leucine-rich repeat family protein -0.76 0.32 -0.3
61 AT5G59240 Ribosomal protein S8e family protein 0.76 0.3 -0.31
62 AT3G07590 Small nuclear ribonucleoprotein family protein 0.76 0.32 -0.31
63 AT3G17465 ribosomal protein L3 plastid ribosomal protein L3 plastid 0.76 0.31 -0.3
64 AT3G01820 P-loop containing nucleoside triphosphate hydrolases
superfamily protein		 0.75 0.29 -0.3
65 AT4G31180 Class II aminoacyl-tRNA and biotin synthetases superfamily
protein		 0.75 0.33 -0.33
66 AT4G32520 serine hydroxymethyltransferase 3 SERINE HYDROXYMETHYLTRANSFERASE 3,
serine hydroxymethyltransferase 3		 0.75 0.32 -0.31
67 AT3G07770 HEAT SHOCK PROTEIN 89.1 HEAT SHOCK PROTEIN 90-6, HEAT
SHOCK PROTEIN 90.6, HEAT SHOCK
PROTEIN 89.1		 0.75 0.32 -0.34
68 AT1G63240 unknown protein; Has 460 Blast hits to 413 proteins in 106
species: Archae - 5; Bacteria - 12; Metazoa - 152; Fungi -
46; Plants - 43; Viruses - 2; Other Eukaryotes - 200
(source: NCBI BLink).		 -0.75 0.31 -0.31
69 AT3G02190 Ribosomal protein L39 family protein 0.75 0.31 -0.32
70 AT3G12340 FKBP-like peptidyl-prolyl cis-trans isomerase family
protein		 0.75 0.34 -0.33
71 AT5G02270 non-intrinsic ABC protein 9 ATP-binding cassette I20,
ARABIDOPSIS THALIANA NON-INTRINSIC
ABC PROTEIN 9, non-intrinsic ABC
protein 9		 0.75 0.33 -0.33
72 AT5G52820 WD-40 repeat family protein / notchless protein, putative 0.75 0.32 -0.3
73 AT5G15550 Transducin/WD40 repeat-like superfamily protein 0.75 0.32 -0.31
74 AT4G31810 ATP-dependent caseinolytic (Clp) protease/crotonase family
protein		 0.75 0.31 -0.33
75 AT5G09420 translocon at the outer membrane of chloroplasts 64-V AtmtOM64, translocon at the outer
membrane of chloroplasts 64-V,
ARABIDOPSIS THALIANA TRANSLOCON AT
THE OUTER MEMBRANE OF CHLOROPLASTS
64-V, outer membrane 64,
translocon at the outer membrane
of chloroplasts 64-V		 0.75 0.3 -0.32
76 AT1G80720 Mitochondrial glycoprotein family protein 0.75 0.33 -0.3
77 AT2G15000 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED
DURING: 13 growth stages; BEST Arabidopsis thaliana protein
match is: unknown protein (TAIR:AT4G34265.2); Has 70 Blast
hits to 70 proteins in 9 species: Archae - 0; Bacteria - 0;
Metazoa - 0; Fungi - 0; Plants - 70; Viruses - 0; Other
Eukaryotes - 0 (source: NCBI BLink).		 0.75 0.31 -0.3
78 AT1G52160 tRNAse Z3 tRNAse Z3 0.75 0.3 -0.31
79 AT4G30930 Ribosomal protein L21 NUCLEAR FUSION DEFECTIVE 1 0.75 0.33 -0.31
80 AT4G34360 S-adenosyl-L-methionine-dependent methyltransferases
superfamily protein		 0.75 0.33 -0.31
81 AT5G64680 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
nucleolus; EXPRESSED IN: 23 plant structures; EXPRESSED
DURING: 13 growth stages; Has 114 Blast hits to 110
proteins in 37 species: Archae - 0; Bacteria - 0; Metazoa -
42; Fungi - 10; Plants - 37; Viruses - 0; Other Eukaryotes
- 25 (source: NCBI BLink).		 0.74 0.3 -0.31
82 AT3G26410 methyltransferases;nucleic acid binding AtTRM11, tRNA modification 11 0.74 0.29 -0.32
83 AT3G04710 ankyrin repeat family protein tetratricopeptide repeat 10 0.74 0.32 -0.31
84 AT1G61770 Chaperone DnaJ-domain superfamily protein 0.74 0.3 -0.33
85 AT2G41870 Remorin family protein -0.74 0.32 -0.32
86 AT1G54380 spliceosome protein-related 0.74 0.32 -0.32
87 AT5G60730 Anion-transporting ATPase 0.74 0.32 -0.3
88 AT2G36070 translocase inner membrane subunit 44-2 translocase inner membrane subunit
44-2, translocase inner membrane
subunit 44-2		 0.74 0.33 -0.28
89 AT3G06330 RING/U-box superfamily protein -0.74 0.33 -0.29
90 AT4G05440 temperature sensing protein-related embryo sac development arrest 35 0.74 0.32 -0.34
91 AT1G28510 Optic atrophy 3 protein (OPA3) 0.74 0.31 -0.34
92 AT5G14105 unknown protein; Has 30201 Blast hits to 17322 proteins in
780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338;
Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes
- 2996 (source: NCBI BLink).		 0.74 0.33 -0.31
93 AT1G52200 PLAC8 family protein 0.74 0.3 -0.33
94 AT5G57350 H(+)-ATPase 3 H(+)-ATPase 3, ARABIDOPSIS
THALIANA ARABIDOPSIS H(+)-ATPASE,
H(+)-ATPase 3		 -0.74 0.33 -0.34
95 AT3G59090 CONTAINS InterPro DOMAIN/s: Protein of unknown function
DUF1084 (InterPro:IPR009457); BEST Arabidopsis thaliana
protein match is: tobamovirus multiplication 1
(TAIR:AT4G21790.1); Has 196 Blast hits to 195 proteins in
29 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi -
2; Plants - 188; Viruses - 0; Other Eukaryotes - 6 (source:
NCBI BLink).		 -0.73 0.32 -0.31
96 AT5G25220 KNOTTED1-like homeobox gene 3 KNOTTED1-like homeobox gene 3 -0.7 0.3 -0.33
97 AT1G53170 ethylene response factor 8 ATERF-8, ETHYLENE RESPONSE ELEMENT
BINDING FACTOR 4, ethylene
response factor 8		 -0.69 0.34 -0.32
98 AT3G02500 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT5G16030.1); Has 49 Blast hits
to 49 proteins in 10 species: Archae - 0; Bacteria - 0;
Metazoa - 0; Fungi - 0; Plants - 49; Viruses - 0; Other
Eukaryotes - 0 (source: NCBI BLink).		 -0.68 0.29 -0.32
99 AT3G07350 Protein of unknown function (DUF506) -0.68 0.31 -0.32
100 AT5G16150 plastidic GLC translocator GLUCOSE TRANSPORTER 1, plastidic
GLC translocator		 -0.68 0.33 -0.33
101 AT3G05640 Protein phosphatase 2C family protein -0.68 0.33 -0.31
102 AT2G46550 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT1G01240.3); Has 72 Blast hits
to 68 proteins in 13 species: Archae - 0; Bacteria - 0;
Metazoa - 1; Fungi - 0; Plants - 71; Viruses - 0; Other
Eukaryotes - 0 (source: NCBI BLink).		 -0.67 0.31 -0.31
103 AT2G30790 photosystem II subunit P-2 photosystem II subunit P-2 -0.67 0.32 -0.29
104 AT1G19835 Plant protein of unknown function (DUF869) -0.67 0.32 -0.32
105 AT5G14510 ARM repeat superfamily protein -0.66 0.33 -0.32
106 AT4G15475 F-box/RNI-like superfamily protein -0.66 0.34 -0.33
107 AT1G22710 sucrose-proton symporter 2 ARABIDOPSIS THALIANA
SUCROSE-PROTON SYMPORTER 2,
sucrose-proton symporter 2,
SUCROSE TRANSPORTER 1		 -0.66 0.31 -0.33
108 AT1G79420 Protein of unknown function (DUF620) -0.65 0.32 -0.32
109 AT5G05870 UDP-glucosyl transferase 76C1 UDP-glucosyl transferase 76C1 -0.65 0.29 -0.3
110 AT3G54390 sequence-specific DNA binding transcription factors -0.65 0.32 -0.33
111 AT3G09600 Homeodomain-like superfamily protein LHY-CCA1-LIKE5, REVEILLE 8 -0.65 0.33 -0.29
112 AT3G54290 FUNCTIONS IN: molecular_function unknown; INVOLVED IN:
N-terminal protein myristoylation; LOCATED IN: chloroplast;
EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13
growth stages; CONTAINS InterPro DOMAIN/s: Haemerythrin/HHE
cation-binding motif (InterPro:IPR012312); Has 59 Blast
hits to 59 proteins in 14 species: Archae - 0; Bacteria -
2; Metazoa - 0; Fungi - 0; Plants - 56; Viruses - 0; Other
Eukaryotes - 1 (source: NCBI BLink).		 -0.65 0.32 -0.32
113 AT1G71050 Heavy metal transport/detoxification superfamily protein heavy metal associated
isoprenylated plant protein 20		 -0.65 0.3 -0.3
114 AT3G23590 REF4-related 1 MED33A, REF4-related 1 -0.64 0.33 -0.3
115 AT4G21650 Subtilase family protein -0.64 0.3 -0.32
116 AT2G18670 RING/U-box superfamily protein -0.64 0.31 -0.33
117 AT2G14080 Disease resistance protein (TIR-NBS-LRR class) family -0.64 0.32 -0.31
118 AT1G68540 NAD(P)-binding Rossmann-fold superfamily protein cinnamoyl coA reductase-like 6,
tetraketide alpha-pyrone reductase
2		 -0.64 0.3 -0.31
119 AT3G17950 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
chloroplast; EXPRESSED IN: 17 plant structures; EXPRESSED
DURING: 10 growth stages; Has 63 Blast hits to 63 proteins
in 12 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi
- 0; Plants - 63; Viruses - 0; Other Eukaryotes - 0
(source: NCBI BLink).		 -0.64 0.32 -0.32
120 AT5G05550 sequence-specific DNA binding transcription factors -0.64 0.31 -0.31
121 AT1G29240 Protein of unknown function (DUF688) -0.63 0.3 -0.33
122 AT2G28420 Lactoylglutathione lyase / glyoxalase I family protein glyoxylase I 8 -0.63 0.32 -0.32
123 AT5G46880 homeobox-7 homeobox-7, HOMEODOMAIN GLABROUS 5 -0.63 0.31 -0.32
124 AT5G07250 RHOMBOID-like protein 3 RHOMBOID-like protein 3,
RHOMBOID-like protein 3		 -0.63 0.33 -0.3
125 AT5G51210 oleosin3 oleosin3 -0.63 0.33 -0.31
126 AT3G17980 Calcium-dependent lipid-binding (CaLB domain) family
protein		 Arabidopsis thaliana C2 domain, C2
domain		 -0.62 0.32 -0.3
127 AT5G66110 Heavy metal transport/detoxification superfamily protein heavy metal associated
isoprenylated plant protein 27		 -0.62 0.32 -0.31
128 AT5G03230 Protein of unknown function, DUF584 -0.62 0.32 -0.32
129 AT4G27840 SNARE-like superfamily protein -0.62 0.31 -0.32
130 AT1G48470 glutamine synthetase 1;5 glutamine synthetase 1;5 -0.61 0.31 -0.32
131 AT1G02700 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
mitochondrion; BEST Arabidopsis thaliana protein match is:
unknown protein (TAIR:AT4G02140.1); Has 49 Blast hits to 49
proteins in 21 species: Archae - 0; Bacteria - 0; Metazoa -
10; Fungi - 6; Plants - 29; Viruses - 0; Other Eukaryotes -
4 (source: NCBI BLink).		 -0.61 0.31 -0.31
132 AT1G73750 Uncharacterised conserved protein UCP031088, alpha/beta
hydrolase		 -0.61 0.32 -0.31
Metabolite information
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  CID Metabolite name Pathway Information Correlation link
Compound name Stereochemistry Aracyc name pcc 2.5% 97.5% PPI
133 C0142 Malonic acid - Malonate fatty acid biosynthesis (plant mitochondria) -0.66 0.32 -0.31 C0142