AGICode | AT4G13790 |
Description | SAUR-like auxin-responsive protein family |
Gene Code | Description / Information | Gene name | Correlation | link | ||||
---|---|---|---|---|---|---|---|---|
pcc | 2.5% | 97.5% | PPI | |||||
1 | AT4G13790 | SAUR-like auxin-responsive protein family | 1 | 0.31 | -0.31 | |||
2 | AT5G16440 | isopentenyl diphosphate isomerase 1 | isopentenyl diphosphate isomerase 1 |
0.82 | 0.32 | -0.31 | ||
3 | AT3G27430 | N-terminal nucleophile aminohydrolases (Ntn hydrolases) superfamily protein |
PBB1 | 0.81 | 0.33 | -0.31 | ||
4 | AT2G23200 | Protein kinase superfamily protein | -0.81 | 0.3 | -0.33 | |||
5 | AT5G47200 | RAB GTPase homolog 1A | RAB GTPase homolog 1A, ARABIDOPSIS RAB GTPASE HOMOLOG D2B, RAB GTPase homolog 1A |
0.8 | 0.33 | -0.29 | ||
6 | AT1G05950 | unknown protein; Has 50 Blast hits to 45 proteins in 14 species: Archae - 5; Bacteria - 0; Metazoa - 4; Fungi - 0; Plants - 34; Viruses - 0; Other Eukaryotes - 7 (source: NCBI BLink). |
-0.79 | 0.3 | -0.32 | |||
7 | AT1G68140 | Protein of unknown function (DUF1644) | 0.79 | 0.29 | -0.33 | |||
8 | AT1G16680 | Chaperone DnaJ-domain superfamily protein | -0.78 | 0.32 | -0.31 | |||
9 | AT3G25560 | NSP-interacting kinase 2 | NSP-interacting kinase 2 | -0.78 | 0.32 | -0.3 | ||
10 | AT3G07480 | 2Fe-2S ferredoxin-like superfamily protein | 0.78 | 0.32 | -0.32 | |||
11 | AT1G11070 | BEST Arabidopsis thaliana protein match is: Hydroxyproline-rich glycoprotein family protein (TAIR:AT1G61080.1); Has 579 Blast hits to 567 proteins in 152 species: Archae - 0; Bacteria - 68; Metazoa - 159; Fungi - 113; Plants - 172; Viruses - 0; Other Eukaryotes - 67 (source: NCBI BLink). |
-0.78 | 0.33 | -0.31 | |||
12 | AT2G35730 | Heavy metal transport/detoxification superfamily protein | 0.77 | 0.32 | -0.29 | |||
13 | AT3G17100 | sequence-specific DNA binding transcription factors | 0.77 | 0.31 | -0.31 | |||
14 | AT5G01270 | carboxyl-terminal domain (ctd) phosphatase-like 2 | ATCPL2, carboxyl-terminal domain (ctd) phosphatase-like 2 |
-0.77 | 0.32 | -0.31 | ||
15 | AT1G25370 | Protein of unknown function (DUF1639) | 0.76 | 0.31 | -0.32 | |||
16 | AT5G40060 | Disease resistance protein (NBS-LRR class) family | -0.76 | 0.32 | -0.33 | |||
17 | AT3G55600 | Membrane fusion protein Use1 | 0.76 | 0.31 | -0.3 | |||
18 | AT5G04170 | Calcium-binding EF-hand family protein | 0.76 | 0.3 | -0.31 | |||
19 | AT2G20850 | STRUBBELIG-receptor family 1 | STRUBBELIG-receptor family 1 | -0.76 | 0.32 | -0.3 | ||
20 | AT1G07240 | UDP-glucosyl transferase 71C5 | UDP-glucosyl transferase 71C5 | 0.76 | 0.31 | -0.32 | ||
21 | AT2G17380 | associated protein 19 | associated protein 19 | 0.76 | 0.33 | -0.31 | ||
22 | AT3G60260 | ELMO/CED-12 family protein | 0.76 | 0.31 | -0.32 | |||
23 | AT4G29750 | CRS1 / YhbY (CRM) domain-containing protein | -0.75 | 0.32 | -0.32 | |||
24 | AT4G04800 | methionine sulfoxide reductase B3 | methionine sulfoxide reductase B3, methionine sulfoxide reductase B3 |
0.75 | 0.31 | -0.31 | ||
25 | AT1G53840 | pectin methylesterase 1 | pectin methylesterase 1, pectin methylesterase 1 |
0.75 | 0.29 | -0.31 | ||
26 | AT2G42680 | multiprotein bridging factor 1A | ARABIDOPSIS THALIANA MULTIPROTEIN BRIDGING FACTOR 1A, multiprotein bridging factor 1A |
0.75 | 0.35 | -0.34 | ||
27 | AT2G26990 | proteasome family protein | ATCSN2, CONSTITUTIVE PHOTOMORPHOGENIC 12, CSN2, FUSCA 12 |
0.75 | 0.32 | -0.32 | ||
28 | AT5G03700 | D-mannose binding lectin protein with Apple-like carbohydrate-binding domain |
0.75 | 0.31 | -0.31 | |||
29 | AT5G07810 | SNF2 domain-containing protein / helicase domain-containing protein / HNH endonuclease domain-containing protein |
-0.75 | 0.32 | -0.33 | |||
30 | AT3G28080 | nodulin MtN21 /EamA-like transporter family protein | -0.75 | 0.29 | -0.33 | |||
31 | AT2G15270 | unknown protein; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF1168 (InterPro:IPR009548); Has 1930 Blast hits to 1364 proteins in 219 species: Archae - 0; Bacteria - 44; Metazoa - 762; Fungi - 280; Plants - 96; Viruses - 3; Other Eukaryotes - 745 (source: NCBI BLink). |
0.75 | 0.31 | -0.32 | |||
32 | AT1G71810 | Protein kinase superfamily protein | -0.75 | 0.32 | -0.32 | |||
33 | AT3G22845 | emp24/gp25L/p24 family/GOLD family protein | 0.75 | 0.32 | -0.32 | |||
34 | AT5G17640 | Protein of unknown function (DUF1005) | 0.74 | 0.29 | -0.3 | |||
35 | AT5G52210 | GTP-binding protein 1 | ATARLB1, GTP-binding protein 1, GTP-binding protein 1 |
0.74 | 0.31 | -0.31 | ||
36 | AT2G43790 | MAP kinase 6 | MAP kinase 6, MAP kinase 6, MAP kinase 6, MAP kinase 6 |
0.74 | 0.33 | -0.32 | ||
37 | AT3G05750 | unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: membrane; EXPRESSED IN: 17 plant structures; EXPRESSED DURING: 10 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G26910.1); Has 2317 Blast hits to 1467 proteins in 247 species: Archae - 4; Bacteria - 750; Metazoa - 557; Fungi - 182; Plants - 180; Viruses - 0; Other Eukaryotes - 644 (source: NCBI BLink). |
-0.74 | 0.31 | -0.3 | |||
38 | AT2G05000 | transposable element gene | -0.74 | 0.33 | -0.33 | |||
39 | AT5G11230 | Nucleotide-sugar transporter family protein | 0.74 | 0.33 | -0.31 | |||
40 | AT4G27320 | Adenine nucleotide alpha hydrolases-like superfamily protein |
ATPHOS34, PHOS34 | 0.74 | 0.32 | -0.33 | ||
41 | AT5G52240 | membrane steroid binding protein 1 | ARABIDOPSIS THALIANA MEMBRANE-ASSOCIATED PROGESTERONE BINDING PROTEIN 5, ATMP1, membrane steroid binding protein 1 |
0.73 | 0.34 | -0.31 | ||
42 | AT3G56040 | UDP-glucose pyrophosphorylase 3 | UDP-glucose pyrophosphorylase 3 | -0.73 | 0.34 | -0.3 | ||
43 | AT4G29230 | NAC domain containing protein 75 | NAC domain containing protein 75, NAC domain containing protein 75 |
0.73 | 0.3 | -0.33 | ||
44 | AT3G53600 | C2H2-type zinc finger family protein | 0.73 | 0.32 | -0.31 | |||
45 | AT1G63180 | UDP-D-glucose/UDP-D-galactose 4-epimerase 3 | UDP-D-glucose/UDP-D-galactose 4-epimerase 3 |
0.73 | 0.31 | -0.3 | ||
46 | AT4G02170 | unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G38700.1); Has 53 Blast hits to 53 proteins in 10 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 53; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). |
0.73 | 0.32 | -0.3 | |||
47 | AT1G61150 | LisH and RanBPM domains containing protein | 0.73 | 0.32 | -0.32 | |||
48 | AT3G25690 | Hydroxyproline-rich glycoprotein family protein | Arabidopsis thaliana CHLOROPLAST UNUSUAL POSITIONING 1, CHLOROPLAST UNUSUAL POSITIONING 1 |
-0.73 | 0.32 | -0.3 | ||
49 | AT1G28280 | VQ motif-containing protein | 0.73 | 0.32 | -0.32 | |||
50 | AT3G51480 | glutamate receptor 3.6 | glutamate receptor 3.6, GLR3.6, glutamate receptor 3.6 |
-0.73 | 0.3 | -0.34 | ||
51 | AT5G26990 | Drought-responsive family protein | 0.72 | 0.32 | -0.33 | |||
52 | AT2G38360 | prenylated RAB acceptor 1.B4 | prenylated RAB acceptor 1.B4 | 0.72 | 0.31 | -0.33 | ||
53 | AT1G64520 | regulatory particle non-ATPase 12A | regulatory particle non-ATPase 12A | 0.72 | 0.32 | -0.3 | ||
54 | AT2G42410 | zinc finger protein 11 | ZINC FINGER PROTEIN 11, zinc finger protein 11 |
-0.72 | 0.31 | -0.34 | ||
55 | AT5G62520 | similar to RCD one 5 | similar to RCD one 5 | 0.72 | 0.31 | -0.33 | ||
56 | AT5G23820 | MD-2-related lipid recognition domain-containing protein | 0.72 | 0.31 | -0.34 | |||
57 | AT1G06010 | unknown protein; Has 25 Blast hits to 25 proteins in 9 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 25; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). |
0.72 | 0.31 | -0.32 | |||
58 | AT2G29890 | villin-like 1 | ATVLN1, villin 1 | -0.72 | 0.34 | -0.28 | ||
59 | AT2G47520 | Integrase-type DNA-binding superfamily protein | Arabidopsis thaliana ethylene response factor 71, ethylene response factor 71, HYPOXIA RESPONSIVE ERF (ETHYLENE RESPONSE FACTOR) 2 |
0.72 | 0.33 | -0.31 | ||
60 | AT1G08770 | prenylated RAB acceptor 1.E | prenylated RAB acceptor 1.E | 0.72 | 0.31 | -0.31 | ||
61 | AT2G20420 | ATP citrate lyase (ACL) family protein | 0.72 | 0.31 | -0.31 | |||
62 | AT4G01850 | S-adenosylmethionine synthetase 2 | AtSAM2, MAT2, S-adenosylmethionine synthetase 2, S-ADENOSYLMETHIONINE SYNTHETASE 2 |
0.72 | 0.29 | -0.32 | ||
63 | AT2G30740 | Protein kinase superfamily protein | 0.72 | 0.32 | -0.33 | |||
64 | AT1G08220 | FUNCTIONS IN: molecular_function unknown; INVOLVED IN: mitochondrial proton-transporting ATP synthase complex assembly; LOCATED IN: mitochondrial inner membrane; EXPRESSED IN: 18 plant structures; EXPRESSED DURING: 7 growth stages; CONTAINS InterPro DOMAIN/s: ATPase assembly factor ATP10, mitochondria (InterPro:IPR007849); Has 168 Blast hits to 168 proteins in 86 species: Archae - 6; Bacteria - 0; Metazoa - 2; Fungi - 107; Plants - 30; Viruses - 0; Other Eukaryotes - 23 (source: NCBI BLink). |
0.72 | 0.3 | -0.3 | |||
65 | AT3G15060 | RAB GTPase homolog A1G | RAB GTPase homolog A1G, RAB GTPase homolog A1G |
0.72 | 0.33 | -0.33 | ||
66 | AT2G17970 | 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein |
-0.72 | 0.31 | -0.32 | |||
67 | AT4G39910 | ubiquitin-specific protease 3 | ubiquitin-specific protease 3, ubiquitin-specific protease 3 |
0.72 | 0.3 | -0.3 | ||
68 | AT5G56750 | N-MYC downregulated-like 1 | N-MYC downregulated-like 1 | 0.71 | 0.31 | -0.31 | ||
69 | AT4G14490 | SMAD/FHA domain-containing protein | -0.71 | 0.32 | -0.32 | |||
70 | AT3G56490 | HIS triad family protein 3 | HISTIDINE TRIAD NUCLEOTIDE-BINDING 1, HIS triad family protein 3 |
0.71 | 0.31 | -0.32 | ||
71 | AT4G32980 | homeobox gene 1 | homeobox gene 1 | -0.71 | 0.33 | -0.33 | ||
72 | AT5G27940 | WPP domain protein 3 | WPP domain protein 3 | -0.71 | 0.29 | -0.33 | ||
73 | AT2G37300 | unknown protein; Has 93 Blast hits to 62 proteins in 29 species: Archae - 0; Bacteria - 6; Metazoa - 13; Fungi - 19; Plants - 25; Viruses - 0; Other Eukaryotes - 30 (source: NCBI BLink). |
ATP-binding cassette I16 | -0.71 | 0.3 | -0.33 | ||
74 | AT2G01710 | Chaperone DnaJ-domain superfamily protein | 0.71 | 0.35 | -0.33 | |||
75 | AT2G35635 | ubiquitin 7 | RELATED TO UBIQUITIN 2, ubiquitin 7 |
0.71 | 0.33 | -0.32 | ||
76 | AT3G16560 | Protein phosphatase 2C family protein | -0.71 | 0.31 | -0.33 | |||
77 | AT1G77400 | CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF688 (InterPro:IPR007789); BEST Arabidopsis thaliana protein match is: hydroxyproline-rich glycoprotein family protein (TAIR:AT1G21695.1); Has 328 Blast hits to 314 proteins in 61 species: Archae - 0; Bacteria - 12; Metazoa - 130; Fungi - 28; Plants - 92; Viruses - 10; Other Eukaryotes - 56 (source: NCBI BLink). |
-0.7 | 0.3 | -0.33 | |||
78 | AT4G13450 | Adenine nucleotide alpha hydrolases-like superfamily protein |
-0.7 | 0.33 | -0.31 | |||
79 | AT1G54440 | Polynucleotidyl transferase, ribonuclease H fold protein with HRDC domain |
-0.7 | 0.31 | -0.3 | |||
80 | AT1G49010 | Duplicated homeodomain-like superfamily protein | -0.7 | 0.31 | -0.33 | |||
81 | AT1G63100 | GRAS family transcription factor | -0.7 | 0.3 | -0.31 | |||
82 | AT1G13050 | unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G26350.1); Has 538 Blast hits to 510 proteins in 88 species: Archae - 0; Bacteria - 23; Metazoa - 81; Fungi - 36; Plants - 361; Viruses - 8; Other Eukaryotes - 29 (source: NCBI BLink). |
-0.7 | 0.33 | -0.31 | |||
83 | AT3G25950 | TRAM, LAG1 and CLN8 (TLC) lipid-sensing domain containing protein |
-0.7 | 0.3 | -0.33 | |||
84 | AT1G43010 | Pentatricopeptide repeat (PPR) superfamily protein | -0.7 | 0.31 | -0.32 | |||
85 | AT1G11130 | Leucine-rich repeat protein kinase family protein | SCRAMBLED, STRUBBELIG-RECEPTOR FAMILY 9, STRUBBELIG |
-0.7 | 0.33 | -0.33 | ||
86 | AT1G48750 | Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein |
-0.7 | 0.33 | -0.34 | |||
87 | AT3G45210 | Protein of unknown function, DUF584 | -0.7 | 0.34 | -0.31 | |||
88 | AT1G07990 | SIT4 phosphatase-associated family protein | -0.69 | 0.32 | -0.3 | |||
89 | AT1G19060 | Protein of unknown function (DUF626) | -0.69 | 0.31 | -0.31 | |||
90 | AT5G56850 | unknown protein; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). |
-0.69 | 0.35 | -0.31 | |||
91 | AT3G30570 | transposable element gene | -0.69 | 0.34 | -0.31 | |||
92 | AT3G19720 | P-loop containing nucleoside triphosphate hydrolases superfamily protein |
ACCUMULATION AND REPLICATION OF CHLOROPLAST 5, Dynamin related protein 5B |
-0.68 | 0.3 | -0.3 | ||
93 | AT4G38530 | phospholipase C1 | phospholipase C1, phospholipase C1 | -0.68 | 0.3 | -0.32 | ||
94 | AT1G68740 | EXS (ERD1/XPR1/SYG1) family protein | PHO1;H1 | -0.68 | 0.32 | -0.31 | ||
95 | AT4G23130 | cysteine-rich RLK (RECEPTOR-like protein kinase) 5 | cysteine-rich RLK (RECEPTOR-like protein kinase) 5, RECEPTOR-LIKE PROTEIN KINASE 6 |
-0.68 | 0.3 | -0.29 | ||
96 | AT3G56080 | S-adenosyl-L-methionine-dependent methyltransferases superfamily protein |
-0.68 | 0.32 | -0.34 | |||
97 | AT3G04200 | RmlC-like cupins superfamily protein | -0.68 | 0.31 | -0.3 | |||
98 | AT1G76630 | Tetratricopeptide repeat (TPR)-like superfamily protein | -0.68 | 0.34 | -0.32 | |||
99 | AT2G29630 | thiaminC | PYRIMIDINE REQUIRING, thiaminC | -0.68 | 0.34 | -0.31 | ||
100 | AT1G64860 | sigma factor A | RPOD1, RNA POLYMERASE SIGMA SUBUNIT 1, RNApolymerase sigma subunit 2, sigma factor A, SIGB |
-0.68 | 0.3 | -0.29 | ||
101 | AT3G23930 | unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: N-terminal protein myristoylation; LOCATED IN: cellular_component unknown; EXPRESSED IN: hypocotyl; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT4G13540.1); Has 10639 Blast hits to 7432 proteins in 646 species: Archae - 82; Bacteria - 826; Metazoa - 5047; Fungi - 759; Plants - 314; Viruses - 86; Other Eukaryotes - 3525 (source: NCBI BLink). |
-0.67 | 0.32 | -0.31 | |||
102 | AT5G61190 | putative endonuclease or glycosyl hydrolase with C2H2-type zinc finger domain |
-0.67 | 0.32 | -0.34 | |||
103 | AT1G66730 | DNA LIGASE 6 | DNA LIGASE 6, DNA LIGASE 6 | -0.67 | 0.32 | -0.33 | ||
104 | AT1G18510 | tetraspanin 16 | tetraspanin 16 | -0.67 | 0.32 | -0.32 | ||
105 | AT3G46130 | myb domain protein 48 | myb domain protein 48, ATMYB48-1, ATMYB48-2, ATMYB48-3, myb domain protein 48 |
-0.67 | 0.31 | -0.29 | ||
106 | AT2G24280 | alpha/beta-Hydrolases superfamily protein | -0.67 | 0.3 | -0.32 | |||
107 | AT3G47430 | peroxin 11B | peroxin 11B | -0.66 | 0.32 | -0.3 | ||
108 | AT3G16060 | ATP binding microtubule motor family protein | -0.66 | 0.33 | -0.29 | |||
109 | AT1G80870 | Protein kinase superfamily protein | -0.66 | 0.32 | -0.29 | |||
110 | AT3G20860 | NIMA-related kinase 5 | NIMA-related kinase 5, NIMA-related kinase 5 |
-0.65 | 0.33 | -0.31 | ||
111 | AT2G32360 | Ubiquitin-like superfamily protein | -0.65 | 0.3 | -0.3 | |||
112 | AT3G03300 | dicer-like 2 | DICER-LIKE 2, dicer-like 2 | -0.65 | 0.33 | -0.32 | ||
113 | AT1G50180 | NB-ARC domain-containing disease resistance protein | -0.65 | 0.3 | -0.31 | |||
114 | AT4G25880 | pumilio 6 | pumilio 6, pumilio 6 | -0.65 | 0.28 | -0.31 | ||
115 | AT2G06230 | transposable element gene | -0.65 | 0.31 | -0.32 | |||
116 | AT5G23770 | DOMAIN OF UNKNOWN FUNCTION 724 8 | DOMAIN OF UNKNOWN FUNCTION 724 8, DOMAIN OF UNKNOWN FUNCTION 724 8 |
-0.65 | 0.32 | -0.31 | ||
117 | AT5G27190 | transposable element gene | -0.65 | 0.31 | -0.31 | |||
118 | AT4G02390 | poly(ADP-ribose) polymerase | poly(ADP-ribose) polymerase, ATPARP1, POLY(ADP-RIBOSE) POLYMERASE 1, poly(ADP-ribose) polymerase |
-0.65 | 0.34 | -0.34 | ||
119 | AT1G29200 | O-fucosyltransferase family protein | -0.65 | 0.3 | -0.31 | |||
120 | AT5G46440 | FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; BEST Arabidopsis thaliana protein match is: Pentatricopeptide repeat (PPR) superfamily protein (TAIR:AT5G46460.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). |
-0.65 | 0.33 | -0.33 | |||
121 | AT5G39560 | Galactose oxidase/kelch repeat superfamily protein | -0.65 | 0.3 | -0.31 | |||
122 | AT5G20690 | Leucine-rich repeat protein kinase family protein | -0.65 | 0.31 | -0.33 | |||
123 | AT5G53020 | Ribonuclease P protein subunit P38-related | -0.65 | 0.32 | -0.31 | |||
124 | AT5G37260 | Homeodomain-like superfamily protein | CIRCADIAN 1, REVEILLE 2 | -0.65 | 0.32 | -0.31 | ||
125 | AT1G12280 | LRR and NB-ARC domains-containing disease resistance protein |
-0.65 | 0.32 | -0.3 |