AT4G13650 : -
Query Information
Cytoscape Web will replace the contents of this div with your graph.
AGICode AT4G13650
Description Pentatricopeptide repeat (PPR) superfamily protein
Gene information
Help   
  Gene Code Description / Information Gene name Correlation link
pcc 2.5% 97.5% PPI
1 AT4G13650 Pentatricopeptide repeat (PPR) superfamily protein 1 0.32 -0.32
2 AT2G28050 Pentatricopeptide repeat (PPR) superfamily protein 0.86 0.32 -0.34
3 AT1G42550 plastid movement impaired1 PLASTID MOVEMENT IMPAIRED1 0.81 0.31 -0.32
4 AT5G27910 nuclear factor Y, subunit C8 nuclear factor Y, subunit C8 0.79 0.32 -0.3
5 AT2G47220 DOMAIN OF UNKNOWN FUNCTION 724 5 DOMAIN OF UNKNOWN FUNCTION 724 5,
DOMAIN OF UNKNOWN FUNCTION 724 5		 0.77 0.33 -0.33
6 AT3G50900 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT5G66490.1); Has 45 Blast hits
to 45 proteins in 7 species: Archae - 0; Bacteria - 0;
Metazoa - 0; Fungi - 0; Plants - 45; Viruses - 0; Other
Eukaryotes - 0 (source: NCBI BLink).		 -0.76 0.29 -0.3
7 AT2G24120 DNA/RNA polymerases superfamily protein PIGMENT DEFECTIVE 319, SCABRA 3 0.76 0.31 -0.3
8 AT3G13620 Amino acid permease family protein -0.76 0.32 -0.34
9 AT5G56150 ubiquitin-conjugating enzyme 30 ubiquitin-conjugating enzyme 30 -0.76 0.33 -0.32
10 AT5G58150 Leucine-rich repeat protein kinase family protein 0.76 0.32 -0.32
11 AT4G26480 RNA-binding KH domain-containing protein 0.75 0.34 -0.3
12 AT5G15760 Ribosomal protein PSRP-3/Ycf65 0.75 0.33 -0.32
13 AT5G65860 ankyrin repeat family protein 0.75 0.29 -0.32
14 AT2G32510 mitogen-activated protein kinase kinase kinase 17 mitogen-activated protein kinase
kinase kinase 17		 -0.75 0.31 -0.3
15 AT5G65450 ubiquitin-specific protease 17 ubiquitin-specific protease 17 0.74 0.33 -0.32
16 AT3G58470 nucleic acid binding;methyltransferases 0.74 0.29 -0.3
17 AT4G02680 ETO1-like 1 ETO1-like 1 0.74 0.31 -0.33
18 AT5G27190 transposable element gene 0.74 0.29 -0.33
19 AT5G11890 FUNCTIONS IN: molecular_function unknown; LOCATED IN:
plasma membrane; EXPRESSED IN: 12 plant structures;
EXPRESSED DURING: 6 growth stages; BEST Arabidopsis
thaliana protein match is: Late embryogenesis abundant
(LEA) hydroxyproline-rich glycoprotein family
(TAIR:AT1G17620.1); Has 1807 Blast hits to 1807 proteins in
277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi
- 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339
(source: NCBI BLink).		 EMBRYO DEFECTIVE 3135 0.74 0.33 -0.32
20 AT1G08080 alpha carbonic anhydrase 7 alpha carbonic anhydrase 7, A.
THALIANA ALPHA CARBONIC ANHYDRASE
7		 0.74 0.3 -0.31
21 AT1G18340 basal transcription factor complex subunit-related 0.74 0.33 -0.3
22 AT5G58840 Subtilase family protein -0.74 0.3 -0.32
23 AT3G59410 protein kinase family protein ARABIDOPSIS THALIANA GENERAL
CONTROL NON-REPRESSIBLE 2, GENERAL
CONTROL NON-REPRESSIBLE 2		 0.74 0.33 -0.31
24 AT1G69330 RING/U-box superfamily protein 0.74 0.31 -0.3
25 AT5G01730 SCAR family protein 4 ATSCAR4, SCAR family protein 4,
WAVE3		 0.73 0.33 -0.32
26 AT5G59680 Leucine-rich repeat protein kinase family protein 0.73 0.29 -0.32
27 AT1G13640 Phosphatidylinositol 3- and 4-kinase family protein 0.73 0.36 -0.32
28 AT1G19230 Riboflavin synthase-like superfamily protein -0.73 0.34 -0.31
29 AT1G68910 WPP domain-interacting protein 2 WPP domain-interacting protein 2 -0.73 0.3 -0.31
30 AT5G04750 F1F0-ATPase inhibitor protein, putative -0.73 0.32 -0.35
31 AT1G79590 syntaxin of plants 52 ATSYP52, syntaxin of plants 52 -0.73 0.31 -0.31
32 AT5G34900 transposable element gene 0.73 0.31 -0.33
33 AT5G61640 peptidemethionine sulfoxide reductase 1 ARABIDOPSIS THALIANA METHIONINE
SULFOXIDE REDUCTASE A1,
peptidemethionine sulfoxide
reductase 1		 -0.72 0.28 -0.33
34 AT1G78470 BEST Arabidopsis thaliana protein match is: F-box family
protein (TAIR:AT1G67390.1); Has 40 Blast hits to 40
proteins in 4 species: Archae - 0; Bacteria - 0; Metazoa -
0; Fungi - 0; Plants - 40; Viruses - 0; Other Eukaryotes -
0 (source: NCBI BLink).		 0.72 0.3 -0.32
35 AT5G24830 Tetratricopeptide repeat (TPR)-like superfamily protein 0.72 0.33 -0.3
36 AT1G17744 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
cellular_component unknown; EXPRESSED IN: stem; Has 30201
Blast hits to 17322 proteins in 780 species: Archae - 12;
Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants -
5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI
BLink).		 -0.72 0.33 -0.31
37 AT2G05630 Ubiquitin-like superfamily protein ATG8D -0.72 0.31 -0.3
38 AT5G58740 HSP20-like chaperones superfamily protein -0.72 0.33 -0.3
39 AT5G42300 ubiquitin-like protein 5 ubiquitin-like protein 5 -0.72 0.32 -0.33
40 AT5G43580 Serine protease inhibitor, potato inhibitor I-type family
protein		 UNUSUAL SERINE PROTEASE INHIBITOR -0.71 0.3 -0.32
41 AT1G79090 FUNCTIONS IN: molecular_function unknown; INVOLVED IN:
biological_process unknown; LOCATED IN: cellular_component
unknown; EXPRESSED IN: 25 plant structures; EXPRESSED
DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s:
Topoisomerase II-associated protein PAT1
(InterPro:IPR019167); BEST Arabidopsis thaliana protein
match is: Topoisomerase II-associated protein PAT1
(TAIR:AT3G22270.1); Has 30201 Blast hits to 17322 proteins
in 780 species: Archae - 12; Bacteria - 1396; Metazoa -
17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other
Eukaryotes - 2996 (source: NCBI BLink).		 0.71 0.33 -0.3
42 AT5G07470 peptidemethionine sulfoxide reductase 3 ARABIDOPSIS THALIANA METHIONINE
SULFOXIDE REDUCTASE 3,
peptidemethionine sulfoxide
reductase 3		 -0.71 0.36 -0.32
43 AT1G12020 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT1G62422.1); Has 89 Blast hits
to 88 proteins in 16 species: Archae - 0; Bacteria - 0;
Metazoa - 0; Fungi - 0; Plants - 87; Viruses - 0; Other
Eukaryotes - 2 (source: NCBI BLink).		 0.71 0.31 -0.3
44 AT2G02980 Pentatricopeptide repeat (PPR) superfamily protein ORGANELLE TRANSCRIPT PROCESSING 85 0.71 0.32 -0.3
45 AT1G67690 Zincin-like metalloproteases family protein 0.71 0.31 -0.3
46 AT1G33410 SUPPRESSOR OF AUXIN RESISTANCE1 ARABIDOPSIS NUCLEOPORIN 160,
NUCLEOPORIN 160, SUPPRESSOR OF
AUXIN RESISTANCE1		 0.7 0.33 -0.3
47 AT3G42290 transposable element gene -0.7 0.31 -0.31
48 AT1G59990 DEA(D/H)-box RNA helicase family protein EMBRYO DEFECTIVE 3108, RNA
helicase 22		 0.7 0.31 -0.29
49 AT4G28085 unknown protein; Has 30201 Blast hits to 17322 proteins in
780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338;
Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes
- 2996 (source: NCBI BLink).		 -0.7 0.33 -0.3
50 AT1G11280 S-locus lectin protein kinase family protein 0.7 0.3 -0.33
51 AT1G16840 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT1G78890.1); Has 71 Blast hits
to 71 proteins in 12 species: Archae - 0; Bacteria - 0;
Metazoa - 0; Fungi - 0; Plants - 71; Viruses - 0; Other
Eukaryotes - 0 (source: NCBI BLink).		 -0.7 0.31 -0.31
52 AT3G56160 Sodium Bile acid symporter family 0.7 0.33 -0.31
53 AT4G29910 origin recognition complex protein 5 ATORC5, EMBRYO DEFECTIVE 2798,
origin recognition complex protein
5		 0.7 0.3 -0.32
54 AT2G45080 cyclin p3;1 cyclin p3;1 0.7 0.33 -0.31
55 AT2G31010 Protein kinase superfamily protein 0.7 0.32 -0.32
56 AT3G49600 ubiquitin-specific protease 26 ATUBP26, SUP32, ubiquitin-specific
protease 26		 0.7 0.34 -0.29
57 AT2G16400 BEL1-like homeodomain 7 BEL1-like homeodomain 7 0.7 0.32 -0.32
58 AT5G63920 topoisomerase 3alpha AtTOP3alpha, topoisomerase 3alpha 0.7 0.31 -0.31
59 AT2G35390 Phosphoribosyltransferase family protein 0.7 0.32 -0.32
60 AT5G28700 transposable element gene 0.7 0.32 -0.31
61 AT3G30570 transposable element gene 0.7 0.33 -0.31
62 AT5G25540 CTC-interacting domain 6 CTC-interacting domain 6 -0.69 0.32 -0.31
63 AT3G51320 Pentatricopeptide repeat (PPR) superfamily protein 0.69 0.29 -0.31
64 AT1G30970 zinc finger (C2H2 type) family protein suppressor of FRIGIDA4 0.69 0.3 -0.33
65 AT4G16120 COBRA-like protein-7 precursor ARABIDOPSIS THALIANA SEC61 BETA 1,
COBRA-like protein-7 precursor,
SEC61 BETA 1		 0.69 0.3 -0.33
66 AT3G26050 TPX2 (targeting protein for Xklp2) protein family 0.69 0.3 -0.33
67 AT4G18750 Pentatricopeptide repeat (PPR) superfamily protein DEFECTIVELY ORGANIZED TRIBUTARIES
4		 0.69 0.33 -0.33
68 AT1G66900 alpha/beta-Hydrolases superfamily protein -0.69 0.32 -0.33
69 AT4G35480 RING-H2 finger A3B RING-H2 finger A3B -0.69 0.31 -0.34
70 AT1G76400 Ribophorin I 0.69 0.3 -0.3
71 AT1G18070 Translation elongation factor EF1A/initiation factor
IF2gamma family protein		 0.69 0.31 -0.31
72 AT5G14980 alpha/beta-Hydrolases superfamily protein 0.69 0.31 -0.31
73 AT1G11190 bifunctional nuclease i bifunctional nuclease i,
ENDONUCLEASE 1		 -0.68 0.31 -0.3
74 AT1G08340 Rho GTPase activating protein with PAK-box/P21-Rho-binding
domain		 -0.68 0.34 -0.31
75 AT3G55050 Protein phosphatase 2C family protein 0.68 0.31 -0.32
76 AT4G37170 Pentatricopeptide repeat (PPR) superfamily protein 0.68 0.3 -0.32
77 AT4G05530 indole-3-butyric acid response 1 indole-3-butyric acid response 1,
SHORT-CHAIN
DEHYDROGENASE/REDUCTASE A		 -0.68 0.32 -0.3
78 AT3G05740 RECQ helicase l1 RECQ helicase l1 0.68 0.33 -0.32
79 AT1G20410 Pseudouridine synthase family protein 0.68 0.34 -0.31
80 AT5G17140 Cysteine proteinases superfamily protein 0.68 0.32 -0.32
81 AT1G76630 Tetratricopeptide repeat (TPR)-like superfamily protein 0.68 0.31 -0.31
82 AT2G17820 histidine kinase 1 AHK1, histidine kinase 1,
histidine kinase 1		 0.68 0.31 -0.31
83 AT1G06740 transposable element gene 0.68 0.31 -0.31
84 AT3G05260 NAD(P)-binding Rossmann-fold superfamily protein -0.68 0.33 -0.33
85 AT4G39090 Papain family cysteine protease RESPONSIVE TO DEHYDRATION 19,
RESPONSIVE TO DEHYDRATION 19A		 -0.67 0.33 -0.33
86 AT1G78410 VQ motif-containing protein -0.67 0.31 -0.3
87 AT4G01070 UDP-Glycosyltransferase superfamily protein GT72B1, UDP-GLUCOSE-DEPENDENT
GLUCOSYLTRANSFERASE 72 B1		 -0.67 0.3 -0.33
88 AT3G55600 Membrane fusion protein Use1 -0.67 0.33 -0.31
89 AT2G22570 nicotinamidase 1 A. THALIANA NICOTINAMIDASE 1,
nicotinamidase 1		 -0.67 0.31 -0.31
90 AT4G18530 Protein of unknown function (DUF707) -0.67 0.31 -0.33
91 AT4G30600 signal recognition particle receptor alpha subunit family
protein		 -0.66 0.3 -0.32
92 AT1G20750 RAD3-like DNA-binding helicase protein -0.66 0.31 -0.31
93 AT3G10890 Glycosyl hydrolase superfamily protein -0.66 0.32 -0.29
94 AT5G04000 unknown protein; Has 1807 Blast hits to 1807 proteins in
277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi
- 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339
(source: NCBI BLink).		 -0.66 0.32 -0.34
95 AT2G23920 unknown protein; INVOLVED IN: N-terminal protein
myristoylation; Has 1 Blast hits to 1 proteins in 1
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 1; Viruses - 0; Other Eukaryotes - 0 (source: NCBI
BLink).		 -0.66 0.32 -0.3
96 AT4G00700 C2 calcium/lipid-binding plant phosphoribosyltransferase
family protein		 -0.66 0.32 -0.31
97 AT1G32630 unknown protein; Has 18 Blast hits to 18 proteins in 10
species: Archae - 0; Bacteria - 0; Metazoa - 2; Fungi - 2;
Plants - 12; Viruses - 0; Other Eukaryotes - 2 (source:
NCBI BLink).		 -0.66 0.31 -0.31
98 AT3G03270 Adenine nucleotide alpha hydrolases-like superfamily
protein		 -0.66 0.32 -0.31
99 AT4G35110 Arabidopsis phospholipase-like protein (PEARLI 4) family -0.66 0.29 -0.29
100 AT1G42420 transposable element gene -0.66 0.31 -0.32
101 AT4G36900 related to AP2 10 DREB AND EAR MOTIF PROTEIN 4,
related to AP2 10		 -0.65 0.29 -0.33
102 AT3G14070 cation exchanger 9 CATION CALCIUM EXCHANGER 3, cation
exchanger 9, CATION CALCIUM
EXCHANGER 3		 -0.65 0.32 -0.3
103 AT1G59710 Protein of unknown function (DUF569) -0.65 0.31 -0.31
104 AT3G10210 SEC14 cytosolic factor family protein / phosphoglyceride
transfer family protein		 -0.65 0.32 -0.3
105 AT5G58190 evolutionarily conserved C-terminal region 10 evolutionarily conserved
C-terminal region 10		 -0.65 0.29 -0.33