AT4G13670 : plastid transcriptionally active 5
Query Information
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AGICode AT4G13670
Description plastid transcriptionally active 5
Gene information
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  Gene Code Description / Information Gene name Correlation link
pcc 2.5% 97.5% PPI
1 AT4G13670 plastid transcriptionally active 5 plastid transcriptionally active 5 1 0.32 -0.34
2 AT5G64460 Phosphoglycerate mutase family protein 0.88 0.31 -0.33
3 AT4G18370 DEGP protease 5 DEGP protease 5, DEGP PROTEASE 5,
PROTEASE HHOA PRECUSOR		 0.88 0.32 -0.31
4 AT1G55480 protein containing PDZ domain, a K-box domain, and a TPR
region		 protein containing PDZ domain, a
K-box domain, and a TPR region		 0.88 0.33 -0.32
5 AT1G20020 ferredoxin-NADP(+)-oxidoreductase 2 LEAF FNR 2,
ferredoxin-NADP(+)-oxidoreductase
2		 0.88 0.31 -0.31
6 AT5G43750 NAD(P)H dehydrogenase 18 NAD(P)H dehydrogenase 18,
Photosynthetic NDH subcomplex B 5		 0.87 0.29 -0.29
7 AT2G30390 ferrochelatase 2 ATFC-II, FC-II, ferrochelatase 2 0.87 0.31 -0.31
8 AT1G14150 PsbQ-like 2 Photosynthetic NDH subcomplex L
2, PsbQ-like 1, PsbQ-like 2		 0.87 0.32 -0.3
9 AT5G17660 tRNA (guanine-N-7) methyltransferase 0.86 0.31 -0.31
10 AT3G26650 glyceraldehyde 3-phosphate dehydrogenase A subunit glyceraldehyde 3-phosphate
dehydrogenase A subunit,
GLYCERALDEHYDE 3-PHOSPHATE
DEHYDROGENASE A SUBUNIT 1		 0.86 0.3 -0.3
11 AT1G64150 Uncharacterized protein family (UPF0016) 0.86 0.32 -0.3
12 AT1G18730 NDH dependent flow 6 NDH dependent flow 6,
Photosynthetic NDH subcomplex B 4		 0.86 0.33 -0.3
13 AT5G19220 ADP glucose pyrophosphorylase large subunit 1 ADP GLUCOSE PYROPHOSPHORYLASE 2,
ADP glucose pyrophosphorylase
large subunit 1		 0.85 0.34 -0.31
14 AT3G43540 Protein of unknown function (DUF1350) 0.85 0.31 -0.3
15 AT1G73655 FKBP-like peptidyl-prolyl cis-trans isomerase family
protein		 0.85 0.3 -0.32
16 AT2G21960 unknown protein; LOCATED IN: chloroplast; EXPRESSED IN: 22
plant structures; EXPRESSED DURING: 13 growth stages; BEST
Arabidopsis thaliana protein match is: unknown protein
(TAIR:AT1G56180.1); Has 224 Blast hits to 222 proteins in
59 species: Archae - 0; Bacteria - 65; Metazoa - 0; Fungi -
0; Plants - 134; Viruses - 0; Other Eukaryotes - 25
(source: NCBI BLink).		 0.84 0.31 -0.32
17 AT1G27480 alpha/beta-Hydrolases superfamily protein 0.84 0.32 -0.32
18 AT3G19480 D-3-phosphoglycerate dehydrogenase 0.84 0.32 -0.32
19 AT2G47920 Kinase interacting (KIP1-like) family protein 0.84 0.3 -0.31
20 AT1G11300 protein serine/threonine kinases;protein kinases;ATP
binding;sugar binding;kinases;carbohydrate binding		 0.83 0.3 -0.32
21 AT4G24090 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
chloroplast; EXPRESSED IN: 23 plant structures; EXPRESSED
DURING: 13 growth stages; Has 144 Blast hits to 142
proteins in 73 species: Archae - 3; Bacteria - 62; Metazoa
- 7; Fungi - 13; Plants - 44; Viruses - 0; Other Eukaryotes
- 15 (source: NCBI BLink).		 0.83 0.31 -0.29
22 AT5G09660 peroxisomal NAD-malate dehydrogenase 2 peroxisomal NAD-malate
dehydrogenase 2		 0.82 0.3 -0.33
23 AT4G03210 xyloglucan endotransglucosylase/hydrolase 9 xyloglucan
endotransglucosylase/hydrolase 9		 0.82 0.28 -0.33
24 AT1G75100 J-domain protein required for chloroplast accumulation
response 1		 J-domain protein required for
chloroplast accumulation response
1		 0.82 0.32 -0.33
25 AT5G47500 Pectin lyase-like superfamily protein pectin methylesterase 5 0.82 0.31 -0.32
26 AT4G33010 glycine decarboxylase P-protein 1 glycine decarboxylase P-protein 1,
glycine decarboxylase P-protein 1		 0.82 0.34 -0.32
27 AT4G15930 Dynein light chain type 1 family protein 0.82 0.35 -0.31
28 AT5G02170 Transmembrane amino acid transporter family protein -0.82 0.28 -0.32
29 AT1G77090 Mog1/PsbP/DUF1795-like photosystem II reaction center PsbP
family protein		 0.81 0.32 -0.31
30 AT5G54290 cytochrome c biogenesis protein family CcdA 0.81 0.31 -0.32
31 AT1G69523 S-adenosyl-L-methionine-dependent methyltransferases
superfamily protein		 0.81 0.3 -0.32
32 AT3G59060 phytochrome interacting factor 3-like 6 PHYTOCHROME-INTERACTING FACTOR 5,
phytochrome interacting factor
3-like 6		 0.81 0.3 -0.3
33 AT3G44960 unknown protein; Has 34 Blast hits to 34 proteins in 10
species: Archae - 0; Bacteria - 0; Metazoa - 3; Fungi - 0;
Plants - 31; Viruses - 0; Other Eukaryotes - 0 (source:
NCBI BLink).		 0.81 0.29 -0.32
34 AT2G45770 signal recognition particle receptor protein, chloroplast
(FTSY)		 CPFTSY, FERRIC CHELATE REDUCTASE
DEFECTIVE 4		 0.81 0.32 -0.31
35 AT3G47730 ATP-binding cassette A2 ATP-binding cassette A2, A.
THALIANA ABC2 HOMOLOG 1, ABC2
homolog 1		 -0.8 0.3 -0.3
36 AT5G44790 copper-exporting ATPase / responsive-to-antagonist 1 /
copper-transporting ATPase (RAN1)		 HMA7, RESPONSIVE-TO-ANTAGONIST 1 -0.8 0.31 -0.32
37 AT5G16910 cellulose-synthase like D2 ATCSLD2, cellulose-synthase like
D2		 -0.8 0.31 -0.32
38 AT1G20830 multiple chloroplast division site 1 MULTIPLE CHLOROPLAST DIVISION SITE
1		 0.8 0.32 -0.33
39 AT4G39270 Leucine-rich repeat protein kinase family protein -0.8 0.32 -0.31
40 AT2G44690 Arabidopsis RAC-like 9 Arabidopsis RAC-like 9,
RHO-RELATED PROTEIN FROM PLANTS 8,
RHO-RELATED PROTEIN FROM PLANTS 8		 0.8 0.32 -0.33
41 AT1G04550 AUX/IAA transcriptional regulator family protein BODENLOS, indole-3-acetic acid
inducible 12		 0.8 0.29 -0.31
42 AT4G26530 Aldolase superfamily protein 0.8 0.31 -0.3
43 AT4G25910 NFU domain protein 3 ATCNFU3, NFU domain protein 3 0.8 0.33 -0.32
44 AT5G65020 annexin 2 annexin 2 -0.8 0.3 -0.33
45 AT4G25390 Protein kinase superfamily protein -0.79 0.3 -0.31
46 AT3G03050 cellulose synthase-like D3 CELLULOSE SYNTHASE LIKE D3,
cellulose synthase-like D3, KOJAK,
ROOT HAIR DEFECTIVE 7		 -0.78 0.31 -0.31
47 AT1G32690 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN: plasma
membrane; EXPRESSED IN: 21 plant structures; EXPRESSED
DURING: 11 growth stages; BEST Arabidopsis thaliana protein
match is: unknown protein (TAIR:AT2G35200.1); Has 45 Blast
hits to 45 proteins in 8 species: Archae - 0; Bacteria - 0;
Metazoa - 0; Fungi - 0; Plants - 45; Viruses - 0; Other
Eukaryotes - 0 (source: NCBI BLink).		 -0.78 0.32 -0.34
48 AT1G54030 GDSL-like Lipase/Acylhydrolase superfamily protein GOLGI DEFECTS 36, MODIFIED VACUOLE
PHENOTYPE 1		 -0.78 0.31 -0.32
49 AT2G29440 glutathione S-transferase tau 6 glutathione S-transferase tau 6,
GLUTATHIONE S-TRANSFERASE 24,
glutathione S-transferase tau 6		 -0.77 0.32 -0.32
50 AT3G16460 Mannose-binding lectin superfamily protein jacalin-related lectin 34 -0.77 0.31 -0.33
51 AT2G18090 PHD finger family protein / SWIB complex BAF60b
domain-containing protein / GYF domain-containing protein		 -0.76 0.3 -0.33
52 AT4G29690 Alkaline-phosphatase-like family protein -0.76 0.32 -0.29
53 AT2G29065 GRAS family transcription factor -0.76 0.32 -0.32
54 AT5G24290 Vacuolar iron transporter (VIT) family protein -0.76 0.31 -0.3
55 AT5G50760 SAUR-like auxin-responsive protein family -0.76 0.32 -0.32
56 AT1G54115 cation calcium exchanger 4 CATION CALCIUM EXCHANGER 4, cation
calcium exchanger 4		 -0.75 0.31 -0.31
57 AT3G60490 Integrase-type DNA-binding superfamily protein -0.75 0.3 -0.31
58 AT1G79710 Major facilitator superfamily protein -0.75 0.3 -0.33
59 AT5G09980 elicitor peptide 4 precursor elicitor peptide 4 precursor -0.75 0.32 -0.33
60 AT1G44170 aldehyde dehydrogenase 3H1 aldehyde dehydrogenase 3H1,
aldehyde dehydrogenase 4		 -0.75 0.31 -0.32
61 AT1G72280 endoplasmic reticulum oxidoreductins 1 endoplasmic reticulum
oxidoreductins 1, endoplasmic
reticulum oxidoreductins 1		 -0.75 0.32 -0.33
62 AT5G12290 dgd1 suppressor 1 DGD1 SUPPRESSOR 1 -0.74 0.31 -0.33
63 AT1G51420 sucrose-phosphatase 1 SUCROSE-PHOSPHATASE 1,
sucrose-phosphatase 1		 -0.74 0.33 -0.32
64 AT5G16960 Zinc-binding dehydrogenase family protein -0.74 0.31 -0.32
65 AT3G52780 Purple acid phosphatases superfamily protein ATPAP20, PAP20 -0.73 0.32 -0.31
66 AT5G60300 Concanavalin A-like lectin protein kinase family protein lectin receptor kinase I.9 -0.73 0.32 -0.32
67 AT5G58730 pfkB-like carbohydrate kinase family protein -0.73 0.32 -0.33
68 AT4G27860 vacuolar iron transporter (VIT) family protein -0.73 0.33 -0.29
69 AT4G24520 P450 reductase 1 ARABIDOPSIS CYTOCHROME REDUCTASE,
P450 reductase 1		 -0.73 0.31 -0.3
70 AT1G23850 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT1G23840.1); Has 47 Blast hits
to 40 proteins in 5 species: Archae - 0; Bacteria - 0;
Metazoa - 0; Fungi - 0; Plants - 47; Viruses - 0; Other
Eukaryotes - 0 (source: NCBI BLink).		 -0.72 0.33 -0.32
71 AT3G15950 DNA topoisomerase-related NAI2 -0.72 0.3 -0.31
72 AT2G24570 WRKY DNA-binding protein 17 ATWRKY17, WRKY DNA-binding protein
17		 -0.72 0.32 -0.31
73 AT4G24110 unknown protein; Has 76 Blast hits to 76 proteins in 13
species: Archae - 0; Bacteria - 0; Metazoa - 1; Fungi - 0;
Plants - 75; Viruses - 0; Other Eukaryotes - 0 (source:
NCBI BLink).		 -0.71 0.34 -0.31
74 AT5G12340 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT1G28190.1); Has 30201 Blast
hits to 17322 proteins in 780 species: Archae - 12;
Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants -
5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI
BLink).		 -0.71 0.31 -0.32
75 AT5G13010 RNA helicase family protein embryo defective 3011 -0.7 0.32 -0.3
76 AT1G06890 nodulin MtN21 /EamA-like transporter family protein -0.7 0.33 -0.3
77 AT5G49810 methionine S-methyltransferase methionine S-methyltransferase -0.7 0.32 -0.29
78 AT2G41850 polygalacturonase abscission zone A. thaliana ARABIDOPSIS DEHISCENCE ZONE
POLYGALACTURONASE 2,
polygalacturonase abscission zone
A. thaliana		 -0.7 0.31 -0.33
79 AT2G01880 purple acid phosphatase 7 PURPLE ACID PHOSPHATASE 7, purple
acid phosphatase 7		 -0.7 0.3 -0.31
80 AT5G67080 mitogen-activated protein kinase kinase kinase 19 mitogen-activated protein kinase
kinase kinase 19		 -0.7 0.32 -0.32
81 AT5G63930 Leucine-rich repeat protein kinase family protein -0.7 0.32 -0.33
82 AT5G54800 glucose 6-phosphate/phosphate translocator 1 ARABIDOPSIS GLUCOSE
6-PHOSPHATE/PHOSPHATE TRANSLOCATOR
1, glucose 6-phosphate/phosphate
translocator 1		 -0.7 0.31 -0.3
Metabolite information
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  CID Metabolite name Pathway Information Correlation link
Compound name Stereochemistry Aracyc name pcc 2.5% 97.5% PPI
83 C0067 Citramalic acid (S)-(+)-, (R)-(-)-Citramalate (S)-Citramalate; (R)-Citramalate - -0.83 0.42 -0.43 C0067
84 C0188 Nicotine (-)-Nicotine Nicotine - -0.76 0.45 -0.47 C0188