AT4G13345 : maternal effect embryo arrest 55
Query Information
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AGICode AT4G13345
Description Serinc-domain containing serine and sphingolipid biosynthesis protein
Gene information
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  Gene Code Description / Information Gene name Correlation link
pcc 2.5% 97.5% PPI
1 AT4G13345 Serinc-domain containing serine and sphingolipid
biosynthesis protein		 maternal effect embryo arrest 55 1 0.34 -0.32
2 AT1G75850 VPS35 homolog B VPS35 homolog B 0.88 0.33 -0.31
3 AT2G39700 expansin A4 ATEXP4, expansin A4, ATHEXP ALPHA
1.6, expansin A4		 -0.86 0.31 -0.32
4 AT1G51950 indole-3-acetic acid inducible 18 indole-3-acetic acid inducible 18 0.84 0.3 -0.32
5 AT3G05010 Protein of unknown function, transmembrane-40 0.83 0.34 -0.3
6 AT1G54130 RELA/SPOT homolog 3 AT-RSH3, RELA/SPOT HOMOLOG 3,
RELA/SPOT homolog 3		 0.83 0.34 -0.31
7 AT3G10370 FAD-dependent oxidoreductase family protein SUGAR-DEPENDENT 6 0.82 0.32 -0.32
8 AT5G64230 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
endomembrane system; EXPRESSED IN: 9 plant structures;
EXPRESSED DURING: 4 anthesis, petal differentiation and
expansion stage; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT3G19920.1); Has 35333 Blast
hits to 34131 proteins in 2444 species: Archae - 798;
Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531;
Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink).		 0.82 0.33 -0.33
9 AT3G24200 FAD/NAD(P)-binding oxidoreductase family protein 0.82 0.32 -0.32
10 AT4G11380 Adaptin family protein 0.81 0.32 -0.35
11 AT3G55910 unknown protein; Has 4 Blast hits to 4 proteins in 2
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 4; Viruses - 0; Other Eukaryotes - 0 (source: NCBI
BLink).		 0.81 0.31 -0.32
12 AT3G45160 Putative membrane lipoprotein -0.81 0.34 -0.3
13 AT5G16730 Plant protein of unknown function (DUF827) 0.81 0.32 -0.33
14 AT1G68820 Transmembrane Fragile-X-F-associated protein 0.8 0.3 -0.31
15 AT3G25100 cell division cycle 45 cell division cycle 45 -0.8 0.3 -0.31
16 AT4G15470 Bax inhibitor-1 family protein 0.79 0.31 -0.31
17 AT1G62045 BEST Arabidopsis thaliana protein match is: ankyrin repeat
family protein (TAIR:AT1G11740.1); Has 26 Blast hits to 26
proteins in 7 species: Archae - 0; Bacteria - 0; Metazoa -
0; Fungi - 0; Plants - 26; Viruses - 0; Other Eukaryotes -
0 (source: NCBI BLink).		 0.79 0.33 -0.32
18 AT5G20030 Plant Tudor-like RNA-binding protein -0.79 0.32 -0.32
19 AT1G70480 Domain of unknown function (DUF220) 0.79 0.33 -0.31
20 AT1G07310 Calcium-dependent lipid-binding (CaLB domain) family
protein		 0.78 0.33 -0.33
21 AT5G35980 yeast YAK1-related gene 1 yeast YAK1-related gene 1 0.78 0.3 -0.34
22 AT5G13530 protein kinases;ubiquitin-protein ligases KEEP ON GOING 0.78 0.33 -0.3
23 AT1G50030 target of rapamycin target of rapamycin 0.78 0.31 -0.31
24 AT5G56190 Transducin/WD40 repeat-like superfamily protein 0.78 0.32 -0.3
25 AT5G16010 3-oxo-5-alpha-steroid 4-dehydrogenase family protein 0.78 0.32 -0.31
26 AT1G03820 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
endomembrane system; EXPRESSED IN: 21 plant structures;
EXPRESSED DURING: 13 growth stages; Has 1345 Blast hits to
1122 proteins in 102 species: Archae - 2; Bacteria - 28;
Metazoa - 28; Fungi - 30; Plants - 109; Viruses - 0; Other
Eukaryotes - 1148 (source: NCBI BLink).		 -0.77 0.33 -0.3
27 AT3G49750 receptor like protein 44 receptor like protein 44, receptor
like protein 44		 -0.77 0.33 -0.32
28 AT5G01960 RING/U-box superfamily protein 0.77 0.32 -0.34
29 AT4G39630 unknown protein; Has 30201 Blast hits to 17322 proteins in
780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338;
Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes
- 2996 (source: NCBI BLink).		 -0.76 0.3 -0.32
30 AT3G16785 phospholipase D P1 PHOSPHOLIPASE D ZETA 1,
phospholipase D P1, PHOSPHOLIPASE
D ZETA1, PLDZETA1		 0.76 0.28 -0.3
31 AT3G63460 transducin family protein / WD-40 repeat family protein 0.76 0.33 -0.32
32 AT1G26390 FAD-binding Berberine family protein 0.75 0.31 -0.33
33 AT1G66230 myb domain protein 20 myb domain protein 20, myb domain
protein 20		 -0.75 0.31 -0.32
34 AT4G23460 Adaptin family protein 0.75 0.32 -0.3
35 AT1G05940 cationic amino acid transporter 9 cationic amino acid transporter 9 0.75 0.32 -0.31
36 AT5G65720 nitrogen fixation S (NIFS)-like 1 ARABIDOPSIS THALIANA NITROGEN
FIXATION S (NIFS)-LIKE 1, NITROGEN
FIXATION S HOMOLOG 1, nitrogen
fixation S (NIFS)-like 1, NITROGEN
FIXATION S HOMOLOG 1		 0.75 0.33 -0.31
37 AT5G66290 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: N-terminal protein myristoylation; LOCATED IN:
cellular_component unknown; EXPRESSED IN: 14 plant
structures; EXPRESSED DURING: 7 growth stages; Has 1807
Blast hits to 1807 proteins in 277 species: Archae - 0;
Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385;
Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).		 0.75 0.29 -0.31
38 AT3G13330 proteasome activating protein 200 proteasome activating protein 200 0.75 0.33 -0.3
39 AT5G62710 Leucine-rich repeat protein kinase family protein -0.75 0.31 -0.32
40 AT3G26050 TPX2 (targeting protein for Xklp2) protein family -0.75 0.28 -0.31
41 AT1G73030 SNF7 family protein CHARGED MULTIVESICULAR BODY
PROTEIN/CHROMATIN MODIFYING
PROTEIN1A, VPS46.2		 0.75 0.32 -0.31
42 AT2G41710 Integrase-type DNA-binding superfamily protein -0.75 0.31 -0.33
43 AT1G05470 DNAse I-like superfamily protein COTYLEDON VASCULAR PATTERN 2 -0.75 0.31 -0.33
44 AT4G36800 RUB1 conjugating enzyme 1 RUB1 conjugating enzyme 1 0.74 0.33 -0.3
45 AT5G59580 UDP-glucosyl transferase 76E1 UDP-glucosyl transferase 76E1 0.74 0.32 -0.31
46 AT2G26920 Ubiquitin-associated/translation elongation factor EF1B
protein		 0.74 0.31 -0.29
47 AT1G32530 RING/U-box superfamily protein 0.74 0.33 -0.34
48 AT3G02070 Cysteine proteinases superfamily protein 0.74 0.32 -0.32
49 AT5G59840 Ras-related small GTP-binding family protein 0.74 0.33 -0.32
50 AT3G16270 ENTH/VHS family protein 0.74 0.32 -0.28
51 AT5G45900 ThiF family protein AUTOPHAGY 7, ATAPG7, ATATG7,
AUTOPHAGY-RELATED 7		 0.74 0.3 -0.32
52 AT5G53850 haloacid dehalogenase-like hydrolase family protein 0.74 0.32 -0.32
53 AT5G43130 TBP-associated factor 4 TBP-associated factor 4,
TBP-associated factor 4B		 0.74 0.33 -0.31
54 AT2G40090 ABC2 homolog 9 ABC2 homolog 9, ABC2 homolog 9 0.73 0.34 -0.32
55 AT1G61840 Cysteine/Histidine-rich C1 domain family protein -0.73 0.31 -0.32
56 AT4G30790 INVOLVED IN: autophagy; EXPRESSED IN: 24 plant structures;
EXPRESSED DURING: 15 growth stages; CONTAINS InterPro
DOMAIN/s: Autophagy-related protein 17
(InterPro:IPR007240), Autophagy-related protein 11
(InterPro:IPR019460); Has 8793 Blast hits to 6268 proteins
in 570 species: Archae - 89; Bacteria - 657; Metazoa -
4844; Fungi - 808; Plants - 441; Viruses - 15; Other
Eukaryotes - 1939 (source: NCBI BLink).		 0.73 0.29 -0.31
57 AT3G18040 MAP kinase 9 MAP kinase 9 0.73 0.31 -0.32
58 AT4G04620 Ubiquitin-like superfamily protein autophagy 8b 0.73 0.28 -0.33
59 AT1G60610 SBP (S-ribonuclease binding protein) family protein 0.73 0.33 -0.32
60 AT1G30510 root FNR 2 root FNR 2, root FNR 2 -0.73 0.32 -0.31
61 AT3G21640 FKBP-type peptidyl-prolyl cis-trans isomerase family
protein		 ATFKBP42, FK506-BINDING PROTEIN
42, TWISTED DWARF 1, ULTRACURVATA
2		 -0.72 0.34 -0.33
62 AT3G19170 presequence protease 1 presequence protease 1, ATZNMP,
presequence protease 1		 0.72 0.3 -0.31
63 AT1G60390 polygalacturonase 1 polygalacturonase 1 -0.72 0.32 -0.3
64 AT4G26750 hydroxyproline-rich glycoprotein family protein extensin-like 0.72 0.3 -0.33
65 AT1G02690 importin alpha isoform 6 importin alpha isoform 6 -0.72 0.32 -0.31
66 AT3G27400 Pectin lyase-like superfamily protein -0.72 0.33 -0.3
67 AT5G47480 RGPR-related 0.72 0.3 -0.31
68 AT5G06600 ubiquitin-specific protease 12 AtUBP12, ubiquitin-specific
protease 12		 0.72 0.32 -0.32
69 AT3G60580 C2H2-like zinc finger protein -0.72 0.33 -0.3
70 AT1G19270 DA1 DA1 0.72 0.33 -0.32
71 AT5G59420 OSBP(oxysterol binding protein)-related protein 3C OSBP(oxysterol binding
protein)-related protein 3C		 0.72 0.32 -0.33
72 AT5G06120 ARM repeat superfamily protein 0.72 0.34 -0.31
73 AT1G70750 Protein of unknown function, DUF593 0.72 0.33 -0.32
74 AT4G13340 Leucine-rich repeat (LRR) family protein leucine-rich repeat/extensin 3 0.72 0.29 -0.32
75 AT1G09060 Zinc finger, RING-type;Transcription factor
jumonji/aspartyl beta-hydroxylase		 0.71 0.33 -0.3
76 AT5G65910 BSD domain-containing protein 0.71 0.32 -0.3
77 AT3G44940 Protein of unknown function (DUF1635) -0.71 0.29 -0.29
78 AT4G18910 NOD26-like intrinsic protein 1;2 NOD26-LIKE INTRINSIC PROTEIN 2,
NOD26-like intrinsic protein 1;2,
NOD26-LIKE INTRINSIC PROTEIN 2		 -0.71 0.34 -0.31
79 AT1G20930 cyclin-dependent kinase B2;2 cyclin-dependent kinase B2;2 -0.71 0.32 -0.29
80 AT1G61140 SNF2 domain-containing protein / helicase domain-containing
protein / zinc finger protein-related		 embryo sac development arrest 16 0.71 0.28 -0.32
81 AT5G57440 Haloacid dehalogenase-like hydrolase (HAD) superfamily
protein		 GLYCEROL-3-PHOSPHATASE 2, GS1 -0.71 0.33 -0.31
82 AT5G54880 DTW domain-containing protein -0.7 0.33 -0.32
83 AT1G68110 ENTH/ANTH/VHS superfamily protein -0.7 0.3 -0.31
84 AT5G66460 Glycosyl hydrolase superfamily protein AtMAN7, endo-beta-mannase 7 -0.7 0.32 -0.32
85 AT1G78750 F-box/RNI-like superfamily protein -0.7 0.33 -0.32
86 AT3G11650 NDR1/HIN1-like 2 NDR1/HIN1-like 2 -0.7 0.31 -0.3
87 AT5G65350 histone 3 11 histone 3 11 -0.7 0.33 -0.31
88 AT3G25980 DNA-binding HORMA family protein MITOTIC ARREST-DEFICIENT 2 -0.69 0.32 -0.32
89 AT1G64405 unknown protein; Has 13 Blast hits to 13 proteins in 7
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 13; Viruses - 0; Other Eukaryotes - 0 (source:
NCBI BLink).		 -0.69 0.32 -0.32
90 AT3G59480 pfkB-like carbohydrate kinase family protein -0.69 0.32 -0.3
91 AT1G47210 cyclin-dependent protein kinase 3;2 cyclin-dependent protein kinase
3;2		 -0.69 0.31 -0.34
92 AT2G38160 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT2G40070.2); Has 972 Blast hits
to 731 proteins in 211 species: Archae - 0; Bacteria - 236;
Metazoa - 194; Fungi - 201; Plants - 218; Viruses - 32;
Other Eukaryotes - 91 (source: NCBI BLink).		 -0.69 0.32 -0.33
93 AT2G25990 unknown protein; Has 0 Blast hits to 0 proteins in 0
species (source: NCBI BLink).		 -0.69 0.31 -0.29
94 AT5G62890 Xanthine/uracil permease family protein -0.68 0.31 -0.31
95 AT5G01190 laccase 10 laccase 10 -0.68 0.34 -0.32
96 AT1G17250 receptor like protein 3 receptor like protein 3, receptor
like protein 3		 -0.68 0.32 -0.3
97 AT2G38970 Zinc finger (C3HC4-type RING finger) family protein -0.67 0.3 -0.3
98 AT3G02885 GAST1 protein homolog 5 GAST1 protein homolog 5 -0.67 0.32 -0.3
99 AT2G47790 Transducin/WD40 repeat-like superfamily protein -0.67 0.3 -0.3
100 AT1G16530 ASYMMETRIC LEAVES 2-like 9 ASYMMETRIC LEAVES 2-like 9, LOB
DOMAIN-CONTAINING PROTEIN 3		 -0.67 0.29 -0.31
101 AT5G18770 F-box/FBD-like domains containing protein -0.66 0.32 -0.3
102 AT2G30820 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT1G06660.1); Has 35333 Blast
hits to 34131 proteins in 2444 species: Archae - 798;
Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531;
Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink).		 -0.66 0.33 -0.31
103 AT4G32605 Mitochondrial glycoprotein family protein -0.66 0.33 -0.29
Metabolite information
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  CID Metabolite name Pathway Information Correlation link
Compound name Stereochemistry Aracyc name pcc 2.5% 97.5% PPI
104 C0067 Citramalic acid (S)-(+)-, (R)-(-)-Citramalate (S)-Citramalate; (R)-Citramalate - 0.88 0.47 -0.42 C0067
105 C0074 Cystine L-Cystine L-Cystine protein precursor 0.71 0.42 -0.45 C0074