AGICode | AT4G13200 |
Description | unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: thylakoid, chloroplast thylakoid membrane, chloroplast, plastoglobule; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; Has 97 Blast hits to 97 proteins in 46 species: Archae - 0; Bacteria - 65; Metazoa - 2; Fungi - 0; Plants - 28; Viruses - 0; Other Eukaryotes - 2 (source: NCBI BLink). |
Gene Code | Description / Information | Gene name | Correlation | link | ||||
---|---|---|---|---|---|---|---|---|
pcc | 2.5% | 97.5% | PPI | |||||
1 | AT4G13200 | unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: thylakoid, chloroplast thylakoid membrane, chloroplast, plastoglobule; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; Has 97 Blast hits to 97 proteins in 46 species: Archae - 0; Bacteria - 65; Metazoa - 2; Fungi - 0; Plants - 28; Viruses - 0; Other Eukaryotes - 2 (source: NCBI BLink). |
1 | 0.31 | -0.3 | |||
2 | AT4G27390 | unknown protein; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). |
0.84 | 0.34 | -0.3 | |||
3 | AT1G52220 | FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast thylakoid membrane, chloroplast; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: photosystem I P subunit (TAIR:AT2G46820.2); Has 291 Blast hits to 291 proteins in 50 species: Archae - 0; Bacteria - 90; Metazoa - 0; Fungi - 0; Plants - 200; Viruses - 0; Other Eukaryotes - 1 (source: NCBI BLink). |
0.81 | 0.33 | -0.29 | |||
4 | AT4G37200 | Thioredoxin superfamily protein | HIGH CHLOROPHYLL FLUORESCENCE 164 | 0.81 | 0.32 | -0.3 | ||
5 | AT5G06060 | NAD(P)-binding Rossmann-fold superfamily protein | 0.79 | 0.32 | -0.31 | |||
6 | AT5G58330 | lactate/malate dehydrogenase family protein | 0.79 | 0.3 | -0.32 | |||
7 | AT5G38660 | acclimation of photosynthesis to environment | ACCLIMATION OF PHOTOSYNTHESIS TO ENVIRONMENT |
0.78 | 0.31 | -0.31 | ||
8 | AT4G27800 | thylakoid-associated phosphatase 38 | PROTEIN PHOSPHATASE 1, thylakoid-associated phosphatase 38 |
0.78 | 0.32 | -0.32 | ||
9 | AT3G17930 | unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast thylakoid membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF3007 (InterPro:IPR021562); Has 236 Blast hits to 236 proteins in 83 species: Archae - 0; Bacteria - 117; Metazoa - 0; Fungi - 0; Plants - 39; Viruses - 0; Other Eukaryotes - 80 (source: NCBI BLink). |
0.78 | 0.33 | -0.33 | |||
10 | AT4G28740 | FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF3493 (InterPro:IPR021883); BEST Arabidopsis thaliana protein match is: tetratricopeptide repeat (TPR)-containing protein (TAIR:AT1G02910.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). |
0.77 | 0.29 | -0.32 | |||
11 | AT1G68660 | Ribosomal protein L12/ ATP-dependent Clp protease adaptor protein ClpS family protein |
0.77 | 0.33 | -0.3 | |||
12 | AT5G45170 | Haloacid dehalogenase-like hydrolase (HAD) superfamily protein |
0.76 | 0.29 | -0.32 | |||
13 | AT5G12130 | integral membrane TerC family protein | TELLURITE RESISTANCE C, PIGMENT DEFECTIVE 149 |
0.76 | 0.33 | -0.3 | ||
14 | AT2G04700 | ferredoxin thioredoxin reductase catalytic beta chain family protein |
0.76 | 0.33 | -0.3 | |||
15 | AT4G13150 | unknown protein; Has 83 Blast hits to 82 proteins in 37 species: Archae - 0; Bacteria - 51; Metazoa - 0; Fungi - 0; Plants - 30; Viruses - 0; Other Eukaryotes - 2 (source: NCBI BLink). |
0.76 | 0.31 | -0.31 | |||
16 | AT4G01900 | GLNB1 homolog | GLNB1 homolog, PII | 0.75 | 0.31 | -0.3 | ||
17 | AT3G60810 | unknown protein; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF1499 (InterPro:IPR010865); Has 444 Blast hits to 444 proteins in 143 species: Archae - 0; Bacteria - 268; Metazoa - 0; Fungi - 0; Plants - 51; Viruses - 0; Other Eukaryotes - 125 (source: NCBI BLink). |
0.75 | 0.33 | -0.3 | |||
18 | AT3G29310 | calmodulin-binding protein-related | -0.75 | 0.31 | -0.31 | |||
19 | AT1G31190 | myo-inositol monophosphatase like 1 | myo-inositol monophosphatase like 1 |
0.74 | 0.31 | -0.31 | ||
20 | AT1G68830 | STT7 homolog STN7 | STT7 homolog STN7 | 0.74 | 0.33 | -0.31 | ||
21 | AT5G03880 | Thioredoxin family protein | 0.74 | 0.3 | -0.31 | |||
22 | AT1G31410 | putrescine-binding periplasmic protein-related | 0.74 | 0.31 | -0.32 | |||
23 | AT4G01940 | NFU domain protein 1 | AtCNFU1, NFU domain protein 1 | 0.73 | 0.33 | -0.31 | ||
24 | AT5G05200 | Protein kinase superfamily protein | 0.73 | 0.32 | -0.33 | |||
25 | AT4G32320 | ascorbate peroxidase 6 | ascorbate peroxidase 6 | 0.73 | 0.34 | -0.32 | ||
26 | AT3G27925 | DegP protease 1 | DegP protease 1, DegP protease 1 | 0.73 | 0.31 | -0.32 | ||
27 | AT1G76730 | NagB/RpiA/CoA transferase-like superfamily protein | 0.73 | 0.33 | -0.32 | |||
28 | AT4G09950 | P-loop containing nucleoside triphosphate hydrolases superfamily protein |
0.72 | 0.31 | -0.32 | |||
29 | AT2G33255 | Haloacid dehalogenase-like hydrolase (HAD) superfamily protein |
0.72 | 0.31 | -0.32 | |||
30 | AT1G06510 | unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; Has 376 Blast hits to 369 proteins in 152 species: Archae - 5; Bacteria - 113; Metazoa - 105; Fungi - 46; Plants - 27; Viruses - 2; Other Eukaryotes - 78 (source: NCBI BLink). |
0.72 | 0.31 | -0.31 | |||
31 | AT2G03390 | uvrB/uvrC motif-containing protein | 0.71 | 0.33 | -0.34 | |||
32 | AT5G02240 | NAD(P)-binding Rossmann-fold superfamily protein | 0.71 | 0.3 | -0.31 | |||
33 | AT1G77930 | Chaperone DnaJ-domain superfamily protein | 0.71 | 0.32 | -0.32 | |||
34 | AT5G51820 | phosphoglucomutase | ARABIDOPSIS THALIANA PHOSPHOGLUCOMUTASE, phosphoglucomutase, PGM1, STARCH-FREE 1 |
0.71 | 0.34 | -0.31 | ||
35 | AT4G38020 | tRNA/rRNA methyltransferase (SpoU) family protein | 0.7 | 0.32 | -0.32 | |||
36 | AT1G68260 | Thioesterase superfamily protein | 0.7 | 0.31 | -0.33 | |||
37 | AT5G41960 | unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). |
0.7 | 0.32 | -0.3 | |||
38 | AT3G09250 | Nuclear transport factor 2 (NTF2) family protein | 0.7 | 0.31 | -0.34 | |||
39 | AT5G40500 | unknown protein; Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). |
0.69 | 0.33 | -0.32 | |||
40 | AT5G37360 | unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast thylakoid membrane, chloroplast; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). |
0.69 | 0.32 | -0.32 | |||
41 | AT4G04850 | K+ efflux antiporter 3 | ATKEA3, K+ efflux antiporter 3 | 0.69 | 0.32 | -0.31 | ||
42 | AT5G61830 | NAD(P)-binding Rossmann-fold superfamily protein | 0.69 | 0.31 | -0.32 | |||
43 | AT3G13480 | unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G55475.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). |
0.68 | 0.32 | -0.3 | |||
44 | AT1G25290 | RHOMBOID-like protein 10 | RHOMBOID-like protein 10, RHOMBOID-like protein 10 |
0.68 | 0.32 | -0.29 | ||
45 | AT1G66330 | senescence-associated family protein | 0.68 | 0.33 | -0.31 | |||
46 | AT2G46735 | unknown protein; Has 14 Blast hits to 14 proteins in 8 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 14; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). |
0.68 | 0.32 | -0.32 | |||
47 | AT4G28025 | unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast thylakoid membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). |
0.68 | 0.31 | -0.31 | |||
48 | AT1G66980 | suppressor of npr1-1 constitutive 4 | Glycerophosphodiester phosphodiesterase (GDPD) like 2, suppressor of npr1-1 constitutive 4 |
0.68 | 0.3 | -0.3 | ||
49 | AT2G23050 | Phototropic-responsive NPH3 family protein | MAB4/ENP/NPY1-LIKE 4, NAKED PINS IN YUC MUTANTS 4 |
-0.67 | 0.31 | -0.33 | ||
50 | AT4G33580 | beta carbonic anhydrase 5 | A. THALIANA BETA CARBONIC ANHYDRASE 5, beta carbonic anhydrase 5 |
0.67 | 0.32 | -0.32 | ||
51 | AT3G23400 | Plastid-lipid associated protein PAP / fibrillin family protein |
fibrillin 4 | 0.67 | 0.31 | -0.32 | ||
52 | AT5G61670 | Encodes a close homolog of the Cauliflower OR (Orange) protein. The function of OR is to induce the differentiation of proplastids or other noncolored plastids into chromoplasts for carotenoid accumulation. Both proteins contain a Cysteine-rich zinc finger domain that is highly specific to DnaJ-like molecular chaperons. |
0.67 | 0.31 | -0.32 | |||
53 | AT2G29100 | glutamate receptor 2.9 | glutamate receptor 2.9, GLUTAMATE RECEPTOR 2.9, glutamate receptor 2.9 |
0.67 | 0.29 | -0.32 | ||
54 | AT4G16060 | unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast, chloroplast stroma; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; Has 42 Blast hits to 42 proteins in 16 species: Archae - 0; Bacteria - 2; Metazoa - 0; Fungi - 0; Plants - 33; Viruses - 0; Other Eukaryotes - 7 (source: NCBI BLink). |
0.67 | 0.29 | -0.31 | |||
55 | AT1G28140 | unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF2301, transmembrane (InterPro:IPR019275); Has 140 Blast hits to 140 proteins in 72 species: Archae - 0; Bacteria - 86; Metazoa - 10; Fungi - 0; Plants - 41; Viruses - 0; Other Eukaryotes - 3 (source: NCBI BLink). |
0.67 | 0.32 | -0.31 | |||
56 | AT1G21065 | unknown protein; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Uncharacterised protein family UPF0047 (InterPro:IPR001602); Has 3800 Blast hits to 3784 proteins in 1137 species: Archae - 215; Bacteria - 2154; Metazoa - 42; Fungi - 99; Plants - 99; Viruses - 0; Other Eukaryotes - 1191 (source: NCBI BLink). |
0.67 | 0.31 | -0.34 | |||
57 | AT2G27290 | Protein of unknown function (DUF1279) | 0.67 | 0.35 | -0.3 | |||
58 | AT2G28670 | Disease resistance-responsive (dirigent-like protein) family protein |
ENHANCED SUBERIN 1 | -0.67 | 0.3 | -0.32 | ||
59 | AT5G47750 | D6 protein kinase like 2 | D6 protein kinase like 2, PK5 | -0.66 | 0.32 | -0.32 | ||
60 | AT5G57090 | Auxin efflux carrier family protein | AGRAVITROPIC ROOT, AGRAVITROPIC ROOT 1, ARABIDOPSIS THALIANA PIN-FORMED 2, ETHYLENE INSENSITIVE ROOT 1, MM31, PIN-FORMED 2, WAVY ROOTS 6 |
-0.66 | 0.31 | -0.32 | ||
61 | AT4G15230 | pleiotropic drug resistance 2 | ATP-binding cassette G30, ATPDR2, pleiotropic drug resistance 2 |
-0.66 | 0.32 | -0.31 | ||
62 | AT2G28190 | copper/zinc superoxide dismutase 2 | copper/zinc superoxide dismutase 2, COPPER/ZINC SUPEROXIDE DISMUTASE 2 |
-0.66 | 0.29 | -0.33 | ||
63 | AT5G19520 | mechanosensitive channel of small conductance-like 9 | ATMSL9, mechanosensitive channel of small conductance-like 9 |
-0.65 | 0.33 | -0.33 | ||
64 | AT1G53200 | unknown protein; Has 21 Blast hits to 21 proteins in 9 species: Archae - 0; Bacteria - 2; Metazoa - 0; Fungi - 0; Plants - 19; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). |
-0.65 | 0.33 | -0.31 | |||
65 | AT2G39430 | Disease resistance-responsive (dirigent-like protein) family protein |
-0.65 | 0.32 | -0.29 | |||
66 | AT1G30080 | Glycosyl hydrolase superfamily protein | -0.64 | 0.32 | -0.29 | |||
67 | AT4G39550 | Galactose oxidase/kelch repeat superfamily protein | -0.64 | 0.31 | -0.32 | |||
68 | AT3G62270 | HCO3- transporter family | -0.64 | 0.32 | -0.32 | |||
69 | AT2G36100 | Uncharacterised protein family (UPF0497) | Casparian strip membrane domain protein 1 |
-0.64 | 0.31 | -0.33 | ||
70 | AT1G44970 | Peroxidase superfamily protein | -0.63 | 0.31 | -0.31 | |||
71 | AT1G18980 | RmlC-like cupins superfamily protein | -0.63 | 0.28 | -0.3 | |||
72 | AT4G28650 | Leucine-rich repeat transmembrane protein kinase family protein |
-0.63 | 0.31 | -0.3 | |||
73 | AT1G61040 | plus-3 domain-containing protein | vernalization independence 5 | -0.62 | 0.33 | -0.3 | ||
74 | AT4G21600 | endonuclease 5 | endonuclease 5 | -0.62 | 0.31 | -0.33 | ||
75 | AT1G64320 | myosin heavy chain-related | -0.62 | 0.33 | -0.33 | |||
76 | AT3G52890 | KCBP-interacting protein kinase | KCBP-interacting protein kinase | -0.62 | 0.31 | -0.34 | ||
77 | AT4G28890 | RING/U-box superfamily protein | -0.62 | 0.32 | -0.31 | |||
78 | AT2G02160 | CCCH-type zinc finger family protein | -0.62 | 0.32 | -0.3 | |||
79 | AT3G02940 | myb domain protein 107 | myb domain protein 107, myb domain protein 107 |
-0.61 | 0.33 | -0.32 | ||
80 | AT5G01160 | RING/U-box superfamily protein | -0.61 | 0.32 | -0.31 | |||
81 | AT5G62190 | DEAD box RNA helicase (PRH75) | PRH75 | -0.61 | 0.32 | -0.31 | ||
82 | AT1G11420 | DOMAIN OF UNKNOWN FUNCTION 724 2 | DOMAIN OF UNKNOWN FUNCTION 724 2, DOMAIN OF UNKNOWN FUNCTION 724 2 |
-0.6 | 0.33 | -0.3 | ||
83 | AT5G14750 | myb domain protein 66 | myb domain protein 66, myb domain protein 66, WEREWOLF, WEREWOLF 1 |
-0.6 | 0.3 | -0.29 | ||
84 | AT3G15240 | Serine/threonine-protein kinase WNK (With No Lysine)-related |
-0.6 | 0.31 | -0.32 | |||
85 | AT2G03880 | Pentatricopeptide repeat (PPR) superfamily protein | required for efficiency of mitochondrial editing 1 |
-0.59 | 0.32 | -0.31 | ||
86 | AT5G12970 | Calcium-dependent lipid-binding (CaLB domain) plant phosphoribosyltransferase family protein |
-0.59 | 0.31 | -0.32 | |||
87 | AT1G71830 | somatic embryogenesis receptor-like kinase 1 | SOMATIC EMBRYOGENESIS RECEPTOR-LIKE KINASE 1, somatic embryogenesis receptor-like kinase 1 |
-0.59 | 0.29 | -0.3 | ||
88 | AT4G26470 | Calcium-binding EF-hand family protein | -0.59 | 0.32 | -0.32 | |||
89 | AT2G01530 | MLP-like protein 329 | MLP-like protein 329, (Zusammen-CA)-enhanced 2 |
-0.59 | 0.31 | -0.32 | ||
90 | AT5G20240 | K-box region and MADS-box transcription factor family protein |
PISTILLATA | -0.58 | 0.33 | -0.3 | ||
91 | ATMG00670 | hypothetical protein | ORF275 | -0.58 | 0.32 | -0.31 | ||
92 | AT5G14020 | Endosomal targeting BRO1-like domain-containing protein | -0.58 | 0.32 | -0.3 | |||
93 | AT5G63660 | Scorpion toxin-like knottin superfamily protein | LOW-MOLECULAR-WEIGHT CYSTEINE-RICH 74, PDF2.5 |
-0.58 | 0.3 | -0.31 | ||
94 | AT4G33160 | F-box family protein | -0.57 | 0.32 | -0.32 | |||
95 | AT1G74500 | activation-tagged BRI1(brassinosteroid-insensitive 1)-suppressor 1 |
activation-tagged BRI1(brassinosteroid-insensitive 1)-suppressor 1, activation-tagged BRI1(brassinosteroid-insensitive 1)-suppressor 1, TARGET OF MONOPTEROS 7 |
-0.57 | 0.32 | -0.32 |
CID | Metabolite name | Pathway Information | Correlation | link | ||||||
---|---|---|---|---|---|---|---|---|---|---|
Compound name | Stereochemistry | Aracyc name | pcc | 2.5% | 97.5% | PPI | ||||
96 | C0183 | MST_3033.1 | - | - | - | 0.83 | 0.46 | -0.46 |