AT4G12750 : -
Query Information
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AGICode AT4G12750
Description Homeodomain-like transcriptional regulator
Gene information
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  Gene Code Description / Information Gene name Correlation link
pcc 2.5% 97.5% PPI
1 AT4G12750 Homeodomain-like transcriptional regulator 1 0.32 -0.29
2 AT4G04670 Met-10+ like family protein / kelch repeat-containing
protein		 0.85 0.32 -0.3
3 AT3G57940 Domain of unknown function (DUF1726) ;Putative ATPase
(DUF699)		 0.83 0.31 -0.3
4 AT1G04945 HIT-type Zinc finger family protein 0.83 0.32 -0.31
5 AT5G61960 MEI2-like protein 1 MEI2-like protein 1, MEI2-like
protein 1		 0.83 0.3 -0.31
6 AT4G25730 FtsJ-like methyltransferase family protein 0.82 0.32 -0.32
7 AT3G13150 Tetratricopeptide repeat (TPR)-like superfamily protein 0.82 0.31 -0.3
8 AT1G15440 periodic tryptophan protein 2 (PERIODIC TRYPTOPHAN PROTEIN 2,
periodic tryptophan protein 2		 0.82 0.32 -0.31
9 AT5G54910 DEA(D/H)-box RNA helicase family protein 0.81 0.31 -0.3
10 AT2G47990 transducin family protein / WD-40 repeat family protein EMBRYO SAC DEVELOPMENT ARREST 13,
EMBRYO SAC DEVELOPMENT ARREST 19,
SLOW WALKER1		 0.81 0.28 -0.31
11 AT3G07050 GTP-binding family protein nucleostemin-like 1 0.81 0.32 -0.31
12 AT1G79490 Pentatricopeptide repeat (PPR) superfamily protein embryo defective 2217 0.81 0.32 -0.34
13 AT1G31970 DEA(D/H)-box RNA helicase family protein STRESS RESPONSE SUPPRESSOR 1 0.81 0.3 -0.32
14 AT5G16750 Transducin family protein / WD-40 repeat family protein TORMOZEMBRYO DEFECTIVE 0.81 0.31 -0.31
15 AT2G18900 Transducin/WD40 repeat-like superfamily protein 0.81 0.31 -0.32
16 AT1G79150 binding 0.81 0.31 -0.34
17 AT5G35910 Polynucleotidyl transferase, ribonuclease H fold protein
with HRDC domain		 0.81 0.33 -0.31
18 AT5G06110 DnaJ domain ;Myb-like DNA-binding domain 0.81 0.3 -0.32
19 AT5G43850 RmlC-like cupins superfamily protein ARD4, ATARD4 -0.8 0.33 -0.29
20 AT1G69070 FUNCTIONS IN: molecular_function unknown; INVOLVED IN:
biological_process unknown; LOCATED IN: cellular_component
unknown; EXPRESSED IN: 23 plant structures; EXPRESSED
DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s:
Nop14-like protein (InterPro:IPR007276); Has 69842 Blast
hits to 35213 proteins in 1572 species: Archae - 363;
Bacteria - 20593; Metazoa - 20851; Fungi - 8010; Plants -
2912; Viruses - 517; Other Eukaryotes - 16596 (source: NCBI
BLink).		 0.8 0.3 -0.29
21 AT3G57660 nuclear RNA polymerase A1 nuclear RNA polymerase A1 0.8 0.31 -0.3
22 AT3G15080 Polynucleotidyl transferase, ribonuclease H-like
superfamily protein		 0.8 0.32 -0.32
23 AT3G06530 ARM repeat superfamily protein 0.8 0.35 -0.32
24 AT1G61640 Protein kinase superfamily protein 0.8 0.32 -0.31
25 AT5G08620 DEA(D/H)-box RNA helicase family protein RNA HELICASE 25, STRESS RESPONSE
SUPPRESSOR 2		 0.8 0.3 -0.34
26 AT4G04940 transducin family protein / WD-40 repeat family protein 0.79 0.32 -0.32
27 AT2G04690 Pyridoxamine 5'-phosphate oxidase family protein -0.79 0.31 -0.32
28 AT3G54540 general control non-repressible 4 ATP-binding cassette F4, general
control non-repressible 4, general
control non-repressible 4		 0.79 0.33 -0.31
29 AT1G29940 nuclear RNA polymerase A2 nuclear RNA polymerase A2 0.79 0.32 -0.31
30 AT1G29900 carbamoyl phosphate synthetase B carbamoyl phosphate synthetase B,
VENOSA 3		 0.78 0.31 -0.33
31 AT5G64420 DNA polymerase V family 0.78 0.33 -0.31
32 AT4G13750 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
family protein		 EMBRYO DEFECTIVE 2597, NO VEIN 0.78 0.31 -0.32
33 AT2G21440 RNA-binding (RRM/RBD/RNP motifs) family protein 0.78 0.3 -0.29
34 AT4G23540 ARM repeat superfamily protein 0.78 0.32 -0.3
35 AT3G16840 P-loop containing nucleoside triphosphate hydrolases
superfamily protein		 0.78 0.32 -0.3
36 AT1G10270 glutamine-rich protein 23 glutamine-rich protein 23 0.77 0.31 -0.32
37 AT3G62310 RNA helicase family protein 0.77 0.3 -0.31
38 AT3G49240 Pentatricopeptide repeat (PPR) superfamily protein embryo defective 1796 0.77 0.31 -0.33
39 AT5G42540 exoribonuclease 2 EXORIBONUCLEASE 2, exoribonuclease
2		 0.77 0.31 -0.32
40 AT1G72320 pumilio 23 pumilio 23, pumilio 23 0.77 0.35 -0.31
41 AT1G71460 Pentatricopeptide repeat (PPR-like) superfamily protein 0.77 0.32 -0.34
42 AT5G17270 Protein prenylyltransferase superfamily protein 0.76 0.29 -0.32
43 AT5G59980 Polymerase/histidinol phosphatase-like 0.76 0.32 -0.31
44 AT3G59820 LETM1-like protein 0.75 0.34 -0.3
45 AT4G19610 nucleotide binding;nucleic acid binding;RNA binding 0.75 0.29 -0.32
46 AT2G34750 RNA polymerase I specific transcription initiation factor
RRN3 protein		 0.75 0.3 -0.3
47 AT1G06720 P-loop containing nucleoside triphosphate hydrolases
superfamily protein		 0.75 0.31 -0.34
48 AT5G38720 unknown protein; Has 13419 Blast hits to 9093 proteins in
698 species: Archae - 38; Bacteria - 1038; Metazoa - 4949;
Fungi - 1086; Plants - 485; Viruses - 44; Other Eukaryotes
- 5779 (source: NCBI BLink).		 0.74 0.28 -0.3
49 AT4G34910 P-loop containing nucleoside triphosphate hydrolases
superfamily protein		 0.74 0.31 -0.3
50 AT3G52140 tetratricopeptide repeat (TPR)-containing protein 0.74 0.33 -0.29
51 AT3G06480 DEAD box RNA helicase family protein 0.74 0.3 -0.32
52 AT3G24080 KRR1 family protein 0.74 0.3 -0.32
53 AT3G11964 RNA binding;RNA binding 0.74 0.28 -0.31
54 AT1G63800 ubiquitin-conjugating enzyme 5 ubiquitin-conjugating enzyme 5 -0.74 0.31 -0.31
55 AT1G63810 CONTAINS InterPro DOMAIN/s: Nrap protein
(InterPro:IPR005554); Has 396 Blast hits to 382 proteins in
182 species: Archae - 3; Bacteria - 2; Metazoa - 142; Fungi
- 146; Plants - 43; Viruses - 0; Other Eukaryotes - 60
(source: NCBI BLink).		 0.73 0.29 -0.32
56 AT1G76810 eukaryotic translation initiation factor 2 (eIF-2) family
protein		 0.73 0.31 -0.33
57 AT1G04900 Protein of unknown function (DUF185) 0.73 0.28 -0.33
58 AT4G31160 DDB1-CUL4 associated factor 1 DDB1-CUL4 associated factor 1 0.73 0.32 -0.32
59 AT2G24500 Zinc finger protein 622 FZF 0.73 0.32 -0.31
60 AT5G67240 small RNA degrading nuclease 3 small RNA degrading nuclease 3 0.73 0.32 -0.32
61 AT2G13540 ARM repeat superfamily protein ABA HYPERSENSITIVE 1, ATCBP80,
CAP-BINDING PROTEIN 80, ENSALADA		 0.73 0.29 -0.31
62 AT5G46210 cullin4 ATCUL4, cullin4 0.73 0.34 -0.3
63 AT3G44530 homolog of histone chaperone HIRA homolog of histone chaperone HIRA 0.73 0.33 -0.33
64 AT5G17440 LUC7 related protein 0.73 0.3 -0.31
65 AT5G09420 translocon at the outer membrane of chloroplasts 64-V AtmtOM64, translocon at the outer
membrane of chloroplasts 64-V,
ARABIDOPSIS THALIANA TRANSLOCON AT
THE OUTER MEMBRANE OF CHLOROPLASTS
64-V, outer membrane 64,
translocon at the outer membrane
of chloroplasts 64-V		 0.73 0.32 -0.33
66 AT1G33780 Protein of unknown function (DUF179) -0.73 0.33 -0.34
67 AT4G28200 FUNCTIONS IN: molecular_function unknown; INVOLVED IN: RNA
processing; LOCATED IN: intracellular; EXPRESSED IN: 22
plant structures; EXPRESSED DURING: 13 growth stages;
CONTAINS InterPro DOMAIN/s: RNA-processing protein, HAT
helix (InterPro:IPR003107), U3 small nucleolar
RNA-associated protein 6 (InterPro:IPR013949); Has 492
Blast hits to 480 proteins in 206 species: Archae - 0;
Bacteria - 2; Metazoa - 128; Fungi - 191; Plants - 60;
Viruses - 0; Other Eukaryotes - 111 (source: NCBI BLink).		 0.73 0.32 -0.3
68 AT1G30290 Tetratricopeptide repeat (TPR)-like superfamily protein 0.72 0.32 -0.31
69 AT3G56990 embryo sac development arrest 7 embryo sac development arrest 7 0.72 0.31 -0.32
70 AT1G04350 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase
superfamily protein		 -0.72 0.32 -0.33
71 AT5G45070 phloem protein 2-A8 phloem protein 2-A8, phloem
protein 2-A8		 0.72 0.32 -0.31
72 AT1G02370 Tetratricopeptide repeat (TPR)-like superfamily protein 0.72 0.31 -0.32
73 AT1G80920 Chaperone DnaJ-domain superfamily protein AtJ8, translocon at the outer
envelope membrane of chloroplasts
12, J8, translocon at the outer
envelope membrane of chloroplasts
12		 -0.72 0.31 -0.33
74 AT3G11450 DnaJ domain ;Myb-like DNA-binding domain 0.72 0.3 -0.33
75 AT1G63780 Ribosomal RNA processing Brix domain protein IMP4 0.71 0.31 -0.3
76 AT5G01230 S-adenosyl-L-methionine-dependent methyltransferases
superfamily protein		 0.71 0.33 -0.32
77 AT5G40480 embryo defective 3012 embryo defective 3012 0.71 0.3 -0.31
78 AT1G04080 Tetratricopeptide repeat (TPR)-like superfamily protein PRP39 0.71 0.3 -0.3
79 AT1G22730 MA3 domain-containing protein 0.71 0.32 -0.3
80 AT3G18100 myb domain protein 4r1 myb domain protein 4R1, myb domain
protein 4r1		 0.71 0.33 -0.31
81 AT3G07750 3'-5'-exoribonuclease family protein 0.71 0.33 -0.29
82 AT1G55820 Kinase-related protein of unknown function (DUF1296) 0.71 0.34 -0.31
83 AT5G37930 Protein with RING/U-box and TRAF-like domains -0.71 0.33 -0.32
84 AT1G19000 Homeodomain-like superfamily protein -0.69 0.32 -0.3
85 AT1G48420 D-cysteine desulfhydrase 1-AMINOCYCLOPROPANE-1-CARBOXYLIC
ACID DEAMINASE 1, A. THALIANA
1-AMINOCYCLOPROPANE-1-CARBOXYLIC
ACID DEAMINASE 1, D-cysteine
desulfhydrase, D-cysteine
desulfhydrase		 -0.69 0.31 -0.32
86 AT3G19000 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase
superfamily protein		 -0.68 0.32 -0.28
87 AT2G41530 S-formylglutathione hydrolase ARABIDOPSIS THALIANA
S-FORMYLGLUTATHIONE HYDROLASE,
S-formylglutathione hydrolase		 -0.68 0.29 -0.31
88 AT3G09600 Homeodomain-like superfamily protein LHY-CCA1-LIKE5, REVEILLE 8 -0.68 0.32 -0.32
89 AT5G18850 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
endomembrane system; EXPRESSED IN: 23 plant structures;
EXPRESSED DURING: 13 growth stages; Has 1807 Blast hits to
1807 proteins in 277 species: Archae - 0; Bacteria - 0;
Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0;
Other Eukaryotes - 339 (source: NCBI BLink).		 -0.68 0.31 -0.33
90 AT4G13950 ralf-like 31 ralf-like 31 -0.67 0.31 -0.31
91 AT1G01160 GRF1-interacting factor 2 GRF1-interacting factor 2 -0.67 0.31 -0.33
92 AT3G26510 Octicosapeptide/Phox/Bem1p family protein -0.67 0.31 -0.31
93 AT1G05060 unknown protein; Has 34 Blast hits to 34 proteins in 13
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 34; Viruses - 0; Other Eukaryotes - 0 (source:
NCBI BLink).		 -0.66 0.31 -0.32
94 AT4G24730 Calcineurin-like metallo-phosphoesterase superfamily
protein		 -0.66 0.35 -0.32
95 AT5G07080 HXXXD-type acyl-transferase family protein -0.65 0.34 -0.33
96 AT1G54850 HSP20-like chaperones superfamily protein -0.65 0.32 -0.32
97 AT3G06850 2-oxoacid dehydrogenases acyltransferase family protein BCE2, DARK INDUCIBLE 3, LTA1 -0.65 0.33 -0.33
98 AT5G47720 Thiolase family protein -0.65 0.35 -0.31
99 AT5G47420 Tryptophan RNA-binding attenuator protein-like -0.65 0.33 -0.34
100 AT1G06630 F-box/RNI-like superfamily protein -0.65 0.31 -0.3
101 AT5G61440 atypical CYS HIS rich thioredoxin 5 atypical CYS HIS rich thioredoxin
5		 -0.65 0.32 -0.31
102 AT4G14930 Survival protein SurE-like phosphatase/nucleotidase -0.65 0.34 -0.29
103 AT1G78550 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase
superfamily protein		 -0.64 0.32 -0.3
104 AT5G02310 proteolysis 6 proteolysis 6 -0.64 0.3 -0.31
105 AT2G36360 Galactose oxidase/kelch repeat superfamily protein -0.63 0.29 -0.32
106 AT1G49740 PLC-like phosphodiesterases superfamily protein -0.63 0.31 -0.3
107 AT5G07250 RHOMBOID-like protein 3 RHOMBOID-like protein 3,
RHOMBOID-like protein 3		 -0.63 0.3 -0.32
108 AT1G11270 F-box and associated interaction domains-containing protein -0.62 0.31 -0.33
109 AT3G24040 Core-2/I-branching beta-1,6-N-acetylglucosaminyltransferase
family protein		 -0.62 0.32 -0.33
110 AT1G30200 F-box family protein -0.62 0.3 -0.33
111 AT5G02020 Encodes a protein involved in salt tolerance, names SIS
(Salt Induced Serine rich).		 Salt Induced Serine rich -0.62 0.31 -0.32
112 AT3G21350 RNA polymerase transcriptional regulation mediator-related MED6 -0.61 0.31 -0.32
113 AT5G43830 Aluminium induced protein with YGL and LRDR motifs -0.61 0.32 -0.33
114 AT5G56610 Phosphotyrosine protein phosphatases superfamily protein -0.61 0.3 -0.3
115 AT2G35950 embryo sac development arrest 12 embryo sac development arrest 12 -0.61 0.35 -0.31
116 AT3G18295 Protein of unknown function (DUF1639) -0.61 0.34 -0.29
117 AT1G12550 D-isomer specific 2-hydroxyacid dehydrogenase family
protein		 hydroxypyruvate reductase 3 -0.61 0.3 -0.31
118 AT5G48810 cytochrome B5 isoform D ATB5-B, ARABIDOPSIS CYTOCHROME B5
ISOFORM D, B5 #3, cytochrome B5
isoform D		 -0.6 0.32 -0.3
119 AT5G52120 phloem protein 2-A14 phloem protein 2-A14, phloem
protein 2-A14		 -0.6 0.33 -0.31
120 AT3G50880 DNA glycosylase superfamily protein -0.6 0.35 -0.3
121 AT4G28240 Wound-responsive family protein -0.6 0.31 -0.31
122 AT1G11380 PLAC8 family protein -0.6 0.31 -0.32
123 AT1G65000 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT5G38060.1); Has 49 Blast hits
to 49 proteins in 14 species: Archae - 0; Bacteria - 0;
Metazoa - 0; Fungi - 0; Plants - 49; Viruses - 0; Other
Eukaryotes - 0 (source: NCBI BLink).		 -0.6 0.32 -0.32
124 AT2G20670 Protein of unknown function (DUF506) -0.59 0.29 -0.31
Metabolite information
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  CID Metabolite name Pathway Information Correlation link
Compound name Stereochemistry Aracyc name pcc 2.5% 97.5% PPI
125 C0136 Lactic acid D,L-Lactic acid Lactate pyruvate fermentation to lactate -0.74 0.44 -0.48 C0136