AT4G12990 : -
Query Information
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AGICode AT4G12990
Description unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: plant-type cell wall; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; Has 4 Blast hits to 4 proteins in 1 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 4; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).
Gene information
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  Gene Code Description / Information Gene name Correlation link
pcc 2.5% 97.5% PPI
1 AT4G12990 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
plant-type cell wall; EXPRESSED IN: 23 plant structures;
EXPRESSED DURING: 13 growth stages; Has 4 Blast hits to 4
proteins in 1 species: Archae - 0; Bacteria - 0; Metazoa -
0; Fungi - 0; Plants - 4; Viruses - 0; Other Eukaryotes - 0
(source: NCBI BLink).		 1 0.32 -0.3
2 AT3G23080 Polyketide cyclase/dehydrase and lipid transport
superfamily protein		 0.68 0.32 -0.31
3 AT5G28760 transposable element gene 0.67 0.32 -0.3
4 AT1G48300 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
endomembrane system; EXPRESSED IN: 24 plant structures;
EXPRESSED DURING: 15 growth stages; Has 96 Blast hits to 87
proteins in 37 species: Archae - 0; Bacteria - 2; Metazoa -
12; Fungi - 2; Plants - 65; Viruses - 0; Other Eukaryotes -
15 (source: NCBI BLink).		 0.65 0.32 -0.32
5 AT5G22330 P-loop containing nucleoside triphosphate hydrolases
superfamily protein		 ATTIP49A, RESISTANCE TO
PSEUDOMONAS SYRINGAE PV MACULICOLA
INTERACTOR 1		 -0.64 0.31 -0.33
6 AT1G15420 CONTAINS InterPro DOMAIN/s: Small-subunit processome, Utp12
(InterPro:IPR007148); Has 764 Blast hits to 656 proteins in
193 species: Archae - 0; Bacteria - 42; Metazoa - 237;
Fungi - 154; Plants - 85; Viruses - 23; Other Eukaryotes -
223 (source: NCBI BLink).		 -0.64 0.32 -0.3
7 AT2G40700 P-loop containing nucleoside triphosphate hydrolases
superfamily protein		 -0.63 0.32 -0.35
8 AT3G02320 N2,N2-dimethylguanosine tRNA methyltransferase -0.63 0.33 -0.32
9 AT4G34910 P-loop containing nucleoside triphosphate hydrolases
superfamily protein		 -0.63 0.3 -0.33
10 AT5G27810 MADS-box transcription factor family protein 0.63 0.32 -0.32
11 AT2G15690 Tetratricopeptide repeat (TPR)-like superfamily protein -0.63 0.32 -0.31
12 AT3G13940 DNA binding;DNA-directed RNA polymerases -0.62 0.3 -0.32
13 AT1G30960 GTP-binding family protein -0.62 0.32 -0.29
14 AT4G14690 Chlorophyll A-B binding family protein EARLY LIGHT-INDUCIBLE PROTEIN 2 -0.61 0.33 -0.29
15 AT3G18295 Protein of unknown function (DUF1639) 0.6 0.31 -0.3
16 AT4G11490 cysteine-rich RLK (RECEPTOR-like protein kinase) 33 cysteine-rich RLK (RECEPTOR-like
protein kinase) 33		 0.59 0.32 -0.3
17 AT5G64880 unknown protein; Has 30201 Blast hits to 17322 proteins in
780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338;
Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes
- 2996 (source: NCBI BLink).		 0.59 0.31 -0.32
18 AT3G20420 RNAse THREE-like protein 2 RNASEIII-LIKE 2, RNAse THREE-like
protein 2		 0.59 0.3 -0.31
19 AT3G15000 cobalt ion binding -0.59 0.31 -0.31
20 AT3G09410 Pectinacetylesterase family protein 0.59 0.3 -0.34
21 AT3G12350 F-box family protein 0.59 0.32 -0.32
22 AT5G26190 Cysteine/Histidine-rich C1 domain family protein 0.59 0.32 -0.29
23 AT3G58040 seven in absentia of Arabidopsis 2 seven in absentia of Arabidopsis 2 0.57 0.29 -0.32
24 AT1G71130 Integrase-type DNA-binding superfamily protein cytokinin response factor 8 0.57 0.32 -0.3
25 AT1G69350 Tetratricopeptide repeat (TPR)-like superfamily protein -0.56 0.31 -0.32
26 AT4G00780 TRAF-like family protein 0.56 0.34 -0.32
27 AT2G01970 Endomembrane protein 70 protein family -0.56 0.31 -0.3
28 AT5G53220 unknown protein; Has 3099 Blast hits to 2528 proteins in
332 species: Archae - 2; Bacteria - 245; Metazoa - 1059;
Fungi - 555; Plants - 177; Viruses - 49; Other Eukaryotes -
1012 (source: NCBI BLink).		 0.56 0.32 -0.33
29 AT4G24270 EMBRYO DEFECTIVE 140 EMBRYO DEFECTIVE 140 -0.56 0.31 -0.32
30 AT5G19430 RING/U-box superfamily protein 0.55 0.3 -0.31
31 AT3G55060 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT2G39300.2); Has 61765 Blast
hits to 33720 proteins in 2065 species: Archae - 846;
Bacteria - 6964; Metazoa - 31967; Fungi - 5247; Plants -
3104; Viruses - 205; Other Eukaryotes - 13432 (source: NCBI
BLink).		 -0.55 0.33 -0.34
32 AT1G09010 glycoside hydrolase family 2 protein 0.55 0.33 -0.31
33 AT5G11910 alpha/beta-Hydrolases superfamily protein 0.54 0.32 -0.32
34 AT5G19200 NAD(P)-binding Rossmann-fold superfamily protein TSC10B 0.54 0.33 -0.31
35 AT2G22310 ubiquitin-specific protease 4 ubiquitin-specific protease 4,
ubiquitin-specific protease 4		 0.53 0.34 -0.31
36 AT3G50990 Peroxidase superfamily protein -0.53 0.32 -0.31
37 AT5G48690 CONTAINS InterPro DOMAIN/s:
Ubiquitin-associated/translation elongation factor EF1B,
N-terminal, eukaryote (InterPro:IPR015940), PUB domain
(InterPro:IPR018997), PUG domain (InterPro:IPR006567),
UBA-like (InterPro:IPR009060); BEST Arabidopsis thaliana
protein match is: ubiquitin-associated (UBA)/TS-N
domain-containing protein (TAIR:AT1G04850.1); Has 7001
Blast hits to 5165 proteins in 492 species: Archae - 9;
Bacteria - 505; Metazoa - 2653; Fungi - 905; Plants - 287;
Viruses - 19; Other Eukaryotes - 2623 (source: NCBI BLink).		 0.53 0.31 -0.32
38 AT2G17870 cold shock domain protein 3 ARABIDOPSIS COLD SHOCK DOMAIN
PROTEIN 3, cold shock domain
protein 3		 -0.53 0.31 -0.3
39 AT5G14900 helicase associated (HA2) domain-containing protein 0.53 0.33 -0.31
40 AT4G17790 SNARE associated Golgi protein family 0.53 0.31 -0.31
41 AT2G13730 transposable element gene -0.53 0.32 -0.28
42 AT5G41490 F-box associated ubiquitination effector family protein 0.52 0.31 -0.32
43 AT3G44410 pseudogene, disease resistence protein, putative, similar
to disease resistance protein RPP1-WsB (Arabidopsis
thaliana) gi|3860165|gb|AAC72978		 0.52 0.32 -0.3
44 AT5G13590 unknown protein; Has 150 Blast hits to 121 proteins in 42
species: Archae - 0; Bacteria - 8; Metazoa - 80; Fungi - 5;
Plants - 17; Viruses - 0; Other Eukaryotes - 40 (source:
NCBI BLink).		 0.52 0.34 -0.33
45 AT5G53830 VQ motif-containing protein 0.52 0.33 -0.32
46 AT3G30710 transposable element gene 0.52 0.28 -0.33
Metabolite information
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  CID Metabolite name Pathway Information Correlation link
Compound name Stereochemistry Aracyc name pcc 2.5% 97.5% PPI
47 C0159 MST_1505.6 - - - 0.71 0.44 -0.44
48 C0162 MST_1588.3 - - - 0.7 0.46 -0.44