AT4G13070 : -
Query Information
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AGICode AT4G13070
Description RNA-binding CRS1 / YhbY (CRM) domain protein
Gene information
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  Gene Code Description / Information Gene name Correlation link
pcc 2.5% 97.5% PPI
1 AT4G13070 RNA-binding CRS1 / YhbY (CRM) domain protein 1 0.33 -0.33
2 AT3G55150 exocyst subunit exo70 family protein H1 exocyst subunit exo70 family
protein H1, exocyst subunit exo70
family protein H1		 0.7 0.32 -0.31
3 AT1G26800 RING/U-box superfamily protein -0.68 0.33 -0.32
4 AT1G63540 hydroxyproline-rich glycoprotein family protein -0.68 0.31 -0.31
5 AT3G56820 unknown protein; Has 34 Blast hits to 34 proteins in 13
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 27; Viruses - 0; Other Eukaryotes - 7 (source:
NCBI BLink).		 -0.67 0.34 -0.32
6 AT2G31130 unknown protein; Has 116 Blast hits to 113 proteins in 44
species: Archae - 0; Bacteria - 3; Metazoa - 21; Fungi - 2;
Plants - 40; Viruses - 0; Other Eukaryotes - 50 (source:
NCBI BLink).		 -0.67 0.31 -0.32
7 AT1G53660 nodulin MtN21 /EamA-like transporter family protein 0.66 0.33 -0.35
8 AT3G20730 Tetratricopeptide repeat (TPR)-like superfamily protein 0.66 0.31 -0.35
9 AT5G27330 Prefoldin chaperone subunit family protein 0.66 0.3 -0.3
10 AT5G35450 Disease resistance protein (CC-NBS-LRR class) family 0.66 0.3 -0.3
11 AT1G32450 nitrate transporter 1.5 nitrate transporter 1.5 0.66 0.32 -0.33
12 AT5G38340 Disease resistance protein (TIR-NBS-LRR class) family 0.65 0.33 -0.29
13 ATCG00065 ribosomal protein S12A RIBOSOMAL PROTEIN S12, ribosomal
protein S12A		 -0.64 0.34 -0.32
14 AT5G58650 plant peptide containing sulfated tyrosine 1 plant peptide containing sulfated
tyrosine 1		 -0.64 0.31 -0.33
15 AT4G19740 Glycosyl hydrolase superfamily protein 0.64 0.32 -0.3
16 AT5G38170 Bifunctional inhibitor/lipid-transfer protein/seed storage
2S albumin superfamily protein		 -0.63 0.32 -0.31
17 AT2G38710 AMMECR1 family -0.63 0.34 -0.34
18 AT5G22960 alpha/beta-Hydrolases superfamily protein 0.61 0.33 -0.31
19 AT3G24500 multiprotein bridging factor 1C ATMBF1C, multiprotein bridging
factor 1C		 -0.61 0.29 -0.32
20 AT5G38820 Transmembrane amino acid transporter family protein 0.61 0.33 -0.31
21 AT5G06265 hyaluronan mediated motility receptor-related 0.61 0.29 -0.32
22 AT5G44770 Cysteine/Histidine-rich C1 domain family protein 0.6 0.31 -0.34
23 AT2G15500 RNA-binding protein -0.6 0.32 -0.31
24 AT1G41870 transposable element gene 0.6 0.33 -0.32
25 AT4G33900 Galactose oxidase/kelch repeat superfamily protein -0.6 0.31 -0.3
26 ATCG00500 acetyl-CoA carboxylase carboxyl transferase subunit beta acetyl-CoA carboxylase carboxyl
transferase subunit beta		 -0.6 0.33 -0.34
27 AT5G38220 alpha/beta-Hydrolases superfamily protein -0.59 0.31 -0.32
28 AT3G52030 F-box family protein with WD40/YVTN repeat doamin -0.59 0.32 -0.3
29 AT1G64270 transposable element gene 0.59 0.3 -0.3
30 AT1G73310 serine carboxypeptidase-like 4 serine carboxypeptidase-like 4 0.59 0.33 -0.32
31 AT5G20450 CONTAINS InterPro DOMAIN/s: Dilute (InterPro:IPR002710);
BEST Arabidopsis thaliana protein match is: Myosin family
protein with Dil domain (TAIR:AT5G20490.2); Has 1723 Blast
hits to 1458 proteins in 355 species: Archae - 28; Bacteria
- 353; Metazoa - 453; Fungi - 121; Plants - 353; Viruses -
3; Other Eukaryotes - 412 (source: NCBI BLink).		 0.59 0.3 -0.35
32 AT1G69010 BES1-interacting Myc-like protein 2 BES1-interacting Myc-like protein
2		 -0.59 0.32 -0.28
33 AT4G25560 myb domain protein 18 myb domain protein 18, LONG AFTER
FAR-RED LIGHT 1, myb domain
protein 18		 0.58 0.31 -0.3
34 AT1G11160 Transducin/WD40 repeat-like superfamily protein 0.58 0.31 -0.31
35 AT1G22885 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
endomembrane system; EXPRESSED IN: 22 plant structures;
EXPRESSED DURING: 13 growth stages; Has 15 Blast hits to 15
proteins in 2 species: Archae - 0; Bacteria - 0; Metazoa -
0; Fungi - 0; Plants - 15; Viruses - 0; Other Eukaryotes -
0 (source: NCBI BLink).		 -0.58 0.34 -0.32
36 AT2G03380 Pentatricopeptide repeat (PPR) superfamily protein 0.58 0.33 -0.31
37 AT1G51430 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT3G28370.1); Has 13 Blast hits
to 13 proteins in 4 species: Archae - 0; Bacteria - 0;
Metazoa - 0; Fungi - 0; Plants - 13; Viruses - 0; Other
Eukaryotes - 0 (source: NCBI BLink).		 0.57 0.3 -0.31
38 AT1G21010 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: N-terminal protein myristoylation; LOCATED IN:
cellular_component unknown; EXPRESSED IN: 24 plant
structures; EXPRESSED DURING: 14 growth stages; BEST
Arabidopsis thaliana protein match is: unknown protein
(TAIR:AT1G76600.1); Has 206 Blast hits to 206 proteins in
13 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi -
0; Plants - 206; Viruses - 0; Other Eukaryotes - 0 (source:
NCBI BLink).		 -0.57 0.31 -0.32
39 AT5G24240 Phosphatidylinositol 3- and 4-kinase ;Ubiquitin family
protein		 -0.57 0.3 -0.3
40 AT1G23690 Domain of unknown function DUF220 -0.57 0.34 -0.33
41 AT1G55530 RING/U-box superfamily protein -0.57 0.3 -0.33
42 ATCG00140 ATP synthase subunit C family protein ATPH -0.56 0.28 -0.31
43 AT5G17910 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
mitochondrion; EXPRESSED IN: 23 plant structures; EXPRESSED
DURING: 15 growth stages; BEST Arabidopsis thaliana protein
match is: unknown protein (TAIR:AT2G29620.1); Has 1807
Blast hits to 1807 proteins in 277 species: Archae - 0;
Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385;
Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).		 0.56 0.3 -0.34
44 AT1G72500 LOCATED IN: plasma membrane; EXPRESSED IN: 23 plant
structures; EXPRESSED DURING: 13 growth stages; CONTAINS
InterPro DOMAIN/s: von Willebrand factor, type A
(InterPro:IPR002035); BEST Arabidopsis thaliana protein
match is: inter-alpha-trypsin inhibitor heavy chain-related
(TAIR:AT1G19110.1); Has 1407 Blast hits to 1406 proteins in
307 species: Archae - 6; Bacteria - 522; Metazoa - 484;
Fungi - 59; Plants - 110; Viruses - 0; Other Eukaryotes -
226 (source: NCBI BLink).		 0.56 0.32 -0.33
45 AT5G53690 unknown protein; Has 1807 Blast hits to 1807 proteins in
277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi
- 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339
(source: NCBI BLink).		 0.56 0.31 -0.31
46 AT5G34790 transposable element gene 0.56 0.33 -0.31
47 AT2G16200 structural molecules 0.56 0.34 -0.32
48 AT1G06140 Pentatricopeptide repeat (PPR) superfamily protein mitochondrial editing factor 3 0.56 0.31 -0.31
49 AT5G03280 NRAMP metal ion transporter family protein ATEIN2, CYTOKININ RESISTANT 1,
ETHYLENE INSENSITIVE 2, ENHANCED
RESPONSE TO ABA3, ORESARA 2,
ORESARA 3, PIR2		 0.56 0.3 -0.31
50 AT1G65370 TRAF-like family protein 0.56 0.32 -0.31
51 AT3G02010 Pentatricopeptide repeat (PPR) superfamily protein 0.55 0.34 -0.34
52 AT5G37590 Tetratricopeptide repeat (TPR)-like superfamily protein 0.55 0.31 -0.32
53 ATCG00430 photosystem II reaction center protein G photosystem II reaction center
protein G		 -0.55 0.32 -0.34
54 AT1G32610 hydroxyproline-rich glycoprotein family protein 0.55 0.32 -0.33
55 AT2G20740 Tetraspanin family protein -0.55 0.31 -0.32
56 AT1G17040 SH2 domain protein A ARABIDOPSIS THALIANA SH2 DOMAIN
PROTEIN A, SH2 domain protein A,
STAT-TYPE LINKER-SH2 DOMAIN FACTOR
A		 -0.55 0.32 -0.32
57 AT3G18215 Protein of unknown function, DUF599 0.54 0.33 -0.33
58 AT5G07150 Leucine-rich repeat protein kinase family protein 0.54 0.31 -0.31
59 AT1G75880 SGNH hydrolase-type esterase superfamily protein -0.54 0.3 -0.32
60 AT4G36110 SAUR-like auxin-responsive protein family 0.54 0.32 -0.32
61 AT1G21860 SKU5 similar 7 SKU5 similar 7 0.54 0.34 -0.31
62 AT1G15490 alpha/beta-Hydrolases superfamily protein 0.54 0.3 -0.28
63 AT5G42200 RING/U-box superfamily protein -0.54 0.32 -0.31
64 AT1G41795 transposable element gene -0.54 0.34 -0.29
65 AT2G25600 Shaker pollen inward K+ channel AKT6, Shaker pollen inward K+
channel		 0.54 0.28 -0.29
66 AT5G46115 unknown protein; Has 30201 Blast hits to 17322 proteins in
780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338;
Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes
- 2996 (source: NCBI BLink).		 -0.53 0.31 -0.32
67 AT2G26110 Protein of unknown function (DUF761) -0.53 0.3 -0.32
68 AT5G37490 ARM repeat superfamily protein -0.53 0.32 -0.32
Metabolite information
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  CID Metabolite name Pathway Information Correlation link
Compound name Stereochemistry Aracyc name pcc 2.5% 97.5% PPI
69 C0033 4-(Methylsulfinyl)butylglucosinolate - 4-Methylsulfinylbutyl glucosinolate glucosinolate biosynthesis from dihomomethionine 0.81 0.46 -0.44 C0033
70 C0207 Phosphatidylglycerol-34:5 - - - -0.62 0.46 -0.45