AT4G12410 : -
Query Information
Cytoscape Web will replace the contents of this div with your graph.
AGICode AT4G12410
Description SAUR-like auxin-responsive protein family
Gene information
Help   
  Gene Code Description / Information Gene name Correlation link
pcc 2.5% 97.5% PPI
1 AT4G12410 SAUR-like auxin-responsive protein family 1 0.31 -0.34
2 AT1G18150 Protein kinase superfamily protein ATMPK8, MPK8 -0.77 0.32 -0.31
3 AT5G20980 methionine synthase 3 methionine synthase 3, methionine
synthase 3		 -0.72 0.31 -0.32
4 AT2G31650 homologue of trithorax homologue of trithorax, SET DOMAIN
PROTEIN 27		 -0.7 0.32 -0.31
5 AT1G09520 LOCATED IN: chloroplast; EXPRESSED IN: 21 plant structures;
EXPRESSED DURING: 12 growth stages; CONTAINS InterPro
DOMAIN/s: Zinc finger, PHD-type, conserved site
(InterPro:IPR019786); BEST Arabidopsis thaliana protein
match is: PHD finger family protein (TAIR:AT3G17460.1); Has
56 Blast hits to 56 proteins in 17 species: Archae - 0;
Bacteria - 2; Metazoa - 0; Fungi - 4; Plants - 46; Viruses
- 0; Other Eukaryotes - 4 (source: NCBI BLink).		 0.7 0.35 -0.31
6 AT1G27880 DEAD/DEAH box RNA helicase family protein -0.7 0.29 -0.3
7 AT5G09860 nuclear matrix protein-related AtHPR1, AtTHO1, HPR1, THO1 -0.69 0.31 -0.32
8 AT4G30890 ubiquitin-specific protease 24 ubiquitin-specific protease 24 -0.69 0.33 -0.32
9 AT2G06020 Homeodomain-like superfamily protein 0.69 0.32 -0.3
10 AT2G21950 SKP1 interacting partner 6 SKP1 interacting partner 6 0.67 0.33 -0.3
11 AT1G11270 F-box and associated interaction domains-containing protein 0.67 0.32 -0.33
12 AT1G30330 auxin response factor 6 auxin response factor 6 -0.67 0.31 -0.33
13 AT4G29420 F-box/RNI-like superfamily protein 0.67 0.29 -0.31
14 AT5G64950 Mitochondrial transcription termination factor family
protein		 -0.66 0.31 -0.32
15 AT1G05910 cell division cycle protein 48-related / CDC48-related -0.66 0.3 -0.31
16 AT3G49660 Transducin/WD40 repeat-like superfamily protein AtWDR5a, human WDR5 (WD40 repeat)
homolog a		 -0.66 0.32 -0.32
17 AT1G76120 Pseudouridine synthase family protein -0.65 0.31 -0.31
18 AT3G01160 FUNCTIONS IN: molecular_function unknown; INVOLVED IN:
biological_process unknown; LOCATED IN: cytosol, nucleus;
EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13
growth stages; CONTAINS InterPro DOMAIN/s: NUC153
(InterPro:IPR012580); Has 36638 Blast hits to 21323
proteins in 1057 species: Archae - 109; Bacteria - 2369;
Metazoa - 13796; Fungi - 4858; Plants - 1657; Viruses -
489; Other Eukaryotes - 13360 (source: NCBI BLink).		 -0.65 0.32 -0.32
19 AT4G13060 F-box associated ubiquitination effector family protein -0.65 0.33 -0.32
20 AT1G21770 Acyl-CoA N-acyltransferases (NAT) superfamily protein 0.65 0.31 -0.31
21 AT5G34800 transposable element gene -0.65 0.31 -0.3
22 AT3G56870 unknown protein; Has 204 Blast hits to 201 proteins in 58
species: Archae - 0; Bacteria - 10; Metazoa - 72; Fungi -
8; Plants - 41; Viruses - 0; Other Eukaryotes - 73 (source:
NCBI BLink).		 -0.65 0.31 -0.32
23 AT2G36900 membrin 11 ATMEMB11, membrin 11 0.65 0.3 -0.3
24 AT2G36060 MMS ZWEI homologue 3 MMS ZWEI homologue 3, UBIQUITIN E2
VARIANT 1C		 0.64 0.3 -0.34
25 AT3G15355 ubiquitin-conjugating enzyme 25 PHO2 FAMILY UBIQUITIN CONJUGATION
ENZYME 1, ubiquitin-conjugating
enzyme 25		 0.64 0.31 -0.33
26 AT5G63770 diacylglycerol kinase 2 diacylglycerol kinase 2,
diacylglycerol kinase 2		 -0.64 0.32 -0.3
27 AT3G49710 Pentatricopeptide repeat (PPR) superfamily protein -0.64 0.34 -0.31
28 AT3G26790 AP2/B3-like transcriptional factor family protein FUSCA 3 0.64 0.31 -0.3
29 AT5G66890 Leucine-rich repeat (LRR) family protein -0.64 0.3 -0.3
30 AT2G27480 Calcium-binding EF-hand family protein 0.64 0.32 -0.32
31 AT2G17270 phosphate transporter 3;3 phosphate transporter 3;3 -0.64 0.32 -0.32
32 AT2G22840 growth-regulating factor 1 growth-regulating factor 1,
growth-regulating factor 1		 -0.63 0.31 -0.32
33 AT4G35370 Transducin/WD40 repeat-like superfamily protein -0.63 0.31 -0.31
34 AT1G74220 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
chloroplast; EXPRESSED IN: male gametophyte, flower, pollen
tube; EXPRESSED DURING: L mature pollen stage, M germinated
pollen stage, 4 anthesis; BEST Arabidopsis thaliana protein
match is: unknown protein (TAIR:AT2G03630.1); Has 383 Blast
hits to 347 proteins in 86 species: Archae - 0; Bacteria -
17; Metazoa - 87; Fungi - 65; Plants - 76; Viruses - 2;
Other Eukaryotes - 136 (source: NCBI BLink).		 0.63 0.29 -0.32
35 AT3G32960 Domain of unknown function (DUF1985) -0.63 0.32 -0.33
36 AT3G27420 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT5G40600.1); Has 43 Blast hits
to 43 proteins in 15 species: Archae - 0; Bacteria - 0;
Metazoa - 3; Fungi - 0; Plants - 39; Viruses - 0; Other
Eukaryotes - 1 (source: NCBI BLink).		 0.63 0.31 -0.31
37 AT1G06630 F-box/RNI-like superfamily protein 0.63 0.31 -0.32
38 AT1G36310 S-adenosyl-L-methionine-dependent methyltransferases
superfamily protein		 -0.63 0.31 -0.31
39 AT2G34960 cationic amino acid transporter 5 cationic amino acid transporter 5 -0.63 0.33 -0.34
40 AT2G33410 RNA-binding (RRM/RBD/RNP motifs) family protein -0.63 0.34 -0.31
41 AT2G17580 Polynucleotide adenylyltransferase family protein -0.62 0.31 -0.32
42 AT5G52950 unknown protein; Has 30201 Blast hits to 17322 proteins in
780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338;
Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes
- 2996 (source: NCBI BLink).		 -0.62 0.32 -0.31
43 AT4G25320 AT hook motif DNA-binding family protein -0.62 0.31 -0.31
44 AT2G26730 Leucine-rich repeat protein kinase family protein -0.62 0.32 -0.32
45 AT4G17930 unknown protein; Has 2 Blast hits to 2 proteins in 1
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 2; Viruses - 0; Other Eukaryotes - 0 (source: NCBI
BLink).		 0.62 0.35 -0.32
46 AT3G62880 Mitochondrial import inner membrane translocase subunit
Tim17/Tim22/Tim23 family protein		 ATOEP16-4 0.61 0.32 -0.29
47 AT3G44600 cyclophilin71 AtCYP71, cyclophilin 71 -0.61 0.32 -0.32
48 AT5G57450 homolog of X-ray repair cross complementing 3 (XRCC3) ARABIDOPSIS THALIANA HOMOLOG OF
X-RAY REPAIR CROSS COMPLEMENTING 3
(XRCC3), homolog of X-ray repair
cross complementing 3 (XRCC3)		 -0.61 0.32 -0.28
49 AT2G26070 Protein of unknown function (DUF778) REVERSION-TO-ETHYLENE SENSITIVITY1 0.61 0.3 -0.32
50 AT5G57070 hydroxyproline-rich glycoprotein family protein -0.61 0.3 -0.31
51 AT1G01980 FAD-binding Berberine family protein -0.61 0.31 -0.31
52 AT3G44850 Protein kinase superfamily protein -0.61 0.32 -0.31
53 AT5G10960 Polynucleotidyl transferase, ribonuclease H-like
superfamily protein		 0.61 0.32 -0.31
54 AT3G61690 nucleotidyltransferases -0.6 0.33 -0.32
55 AT5G28190 unknown protein; Has 45 Blast hits to 34 proteins in 11
species: Archae - 0; Bacteria - 2; Metazoa - 1; Fungi - 0;
Plants - 7; Viruses - 2; Other Eukaryotes - 33 (source:
NCBI BLink).		 0.6 0.31 -0.31
56 AT4G25270 Tetratricopeptide repeat (TPR)-like superfamily protein organelle transcript processing 70 -0.6 0.32 -0.31
57 AT2G40160 Plant protein of unknown function (DUF828) TBL30 -0.6 0.33 -0.31
58 AT1G39430 transposable element gene -0.6 0.3 -0.32
59 AT1G68340 Protein of unknown function (DUF1639) 0.6 0.34 -0.34
60 AT5G47090 unknown protein; CONTAINS InterPro DOMAIN/s: Protein of
unknown function DUF2052, coiled-coil (InterPro:IPR018613);
Has 30201 Blast hits to 17322 proteins in 780 species:
Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi -
3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996
(source: NCBI BLink).		 0.6 0.29 -0.31
61 AT4G37630 cyclin d5;1 cyclin d5;1 -0.6 0.31 -0.31
62 AT2G04038 basic leucine-zipper 48 basic leucine-zipper 48, basic
leucine-zipper 48		 0.6 0.32 -0.34
63 AT2G10920 unknown protein; Has 5 Blast hits to 5 proteins in 1
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 5; Viruses - 0; Other Eukaryotes - 0 (source: NCBI
BLink).		 -0.6 0.31 -0.32
64 AT3G54490 RNA polymerase II fifth largest subunit, E RNA polymerase II fifth largest
subunit, E		 -0.59 0.3 -0.32
65 AT3G18120 F-box associated ubiquitination effector family protein -0.59 0.31 -0.3
66 AT4G05240 Ubiquitin-like superfamily protein -0.59 0.32 -0.33
67 AT2G03690 coenzyme Q biosynthesis Coq4 family protein / ubiquinone
biosynthesis Coq4 family protein		 0.59 0.3 -0.31
68 AT1G06470 Nucleotide/sugar transporter family protein -0.59 0.32 -0.34
69 AT4G21610 lsd one like 2 lsd one like 2 0.59 0.32 -0.33
70 AT1G02820 Late embryogenesis abundant 3 (LEA3) family protein -0.59 0.29 -0.31
71 AT1G03420 transposable element gene sadhu non-coding retrotransposon
4-2		 -0.59 0.32 -0.33
72 AT4G15430 ERD (early-responsive to dehydration stress) family protein -0.59 0.32 -0.31
73 AT1G19860 Zinc finger C-x8-C-x5-C-x3-H type family protein -0.59 0.32 -0.31
74 AT5G28150 Plant protein of unknown function (DUF868) -0.59 0.34 -0.3
75 AT4G04050 transposable element gene -0.59 0.31 -0.3
76 AT3G11590 unknown protein; LOCATED IN: plasma membrane; EXPRESSED IN:
22 plant structures; EXPRESSED DURING: 13 growth stages;
BEST Arabidopsis thaliana protein match is: unknown protein
(TAIR:AT5G22310.1); Has 22320 Blast hits to 15179 proteins
in 1213 species: Archae - 372; Bacteria - 2307; Metazoa -
10906; Fungi - 1700; Plants - 1146; Viruses - 65; Other
Eukaryotes - 5824 (source: NCBI BLink).		 -0.58 0.31 -0.33
77 AT5G47360 Tetratricopeptide repeat (TPR)-like superfamily protein -0.58 0.29 -0.33
78 AT1G62700 Arabidopsis NAC domain containing protein 26 Arabidopsis NAC domain containing
protein 26, VASCULAR RELATED
NAC-DOMAIN PROTEIN 5		 0.58 0.33 -0.31
79 AT1G16060 ARIA-interacting double AP2 domain protein ARIA-interacting double AP2 domain
protein		 -0.58 0.32 -0.33
80 AT3G45380 transposable element gene 0.58 0.31 -0.31
81 AT3G10180 P-loop containing nucleoside triphosphate hydrolases
superfamily protein		 -0.58 0.34 -0.32
82 AT1G42420 transposable element gene 0.58 0.3 -0.33
83 AT5G03770 KDO transferase A AtKdtA, KDO transferase A 0.57 0.31 -0.31
84 AT2G19380 RNA recognition motif (RRM)-containing protein -0.57 0.32 -0.3
85 AT4G01440 nodulin MtN21 /EamA-like transporter family protein -0.57 0.29 -0.36
86 AT3G24500 multiprotein bridging factor 1C ATMBF1C, multiprotein bridging
factor 1C		 0.57 0.31 -0.3
Metabolite information
Help   
  CID Metabolite name Pathway Information Correlation link
Compound name Stereochemistry Aracyc name pcc 2.5% 97.5% PPI
87 C0093 Galactinol dihydrate - Galactinol galactosylcyclitol biosynthesis,
stachyose biosynthesis,
ajugose biosynthesis I (galactinol-dependent) 		-0.73 0.43 -0.46 C0093