AGICode | AT4G11820 |
Description | hydroxymethylglutaryl-CoA synthase / HMG-CoA synthase / 3-hydroxy-3-methylglutaryl coenzyme A synthase |
Gene Code | Description / Information | Gene name | Correlation | link | ||||
---|---|---|---|---|---|---|---|---|
pcc | 2.5% | 97.5% | PPI | |||||
1 | AT4G11820 | hydroxymethylglutaryl-CoA synthase / HMG-CoA synthase / 3-hydroxy-3-methylglutaryl coenzyme A synthase |
FLAKY POLLEN 1, HYDROXYMETHYLGLUTARYL-COA SYNTHASE, MVA1 |
1 | 0.29 | -0.32 | ||
2 | AT4G11190 | Disease resistance-responsive (dirigent-like protein) family protein |
0.8 | 0.31 | -0.32 | |||
3 | AT1G74650 | myb domain protein 31 | ARABIDOPSIS THALIANA MYB DOMAIN PROTEIN 31, ATY13, myb domain protein 31 |
-0.71 | 0.33 | -0.31 | ||
4 | AT4G39770 | Haloacid dehalogenase-like hydrolase (HAD) superfamily protein |
trehalose-6-phosphate phosphatase H |
0.71 | 0.28 | -0.31 | ||
5 | AT2G34560 | P-loop containing nucleoside triphosphate hydrolases superfamily protein |
0.69 | 0.31 | -0.3 | |||
6 | AT1G45230 | Protein of unknown function (DUF3223) | -0.68 | 0.31 | -0.32 | |||
7 | AT2G24540 | Galactose oxidase/kelch repeat superfamily protein | ATTENUATED FAR-RED RESPONSE | -0.68 | 0.32 | -0.3 | ||
8 | AT5G60790 | ABC transporter family protein | ATP-binding cassette F1, ARABIDOPSIS THALIANA GENERAL CONTROL NON-REPRESSIBLE 1, GENERAL CONTROL NON-REPRESSIBLE 1 |
-0.68 | 0.3 | -0.32 | ||
9 | AT2G10900 | transposable element gene | -0.68 | 0.31 | -0.29 | |||
10 | AT2G39400 | alpha/beta-Hydrolases superfamily protein | -0.67 | 0.33 | -0.29 | |||
11 | AT5G60660 | plasma membrane intrinsic protein 2;4 | plasma membrane intrinsic protein 2;4, PIP2F |
0.66 | 0.31 | -0.34 | ||
12 | AT3G59690 | IQ-domain 13 | IQ-domain 13 | 0.65 | 0.31 | -0.33 | ||
13 | AT1G50430 | Ergosterol biosynthesis ERG4/ERG24 family | DELTA5,7-STEROL DELTA7 REDUCTASE, DWARF 5, LEPIDA, PARVA, STEROL DELTA7 REDUCTASE |
0.65 | 0.32 | -0.32 | ||
14 | AT3G22400 | PLAT/LH2 domain-containing lipoxygenase family protein | Arabidopsis thaliana lipoxygenase 5, LOX5 |
0.65 | 0.33 | -0.33 | ||
15 | AT5G03510 | C2H2-type zinc finger family protein | 0.64 | 0.31 | -0.31 | |||
16 | AT2G31090 | unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT2G20562.1); Has 70 Blast hits to 70 proteins in 13 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 70; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). |
0.64 | 0.31 | -0.33 | |||
17 | AT4G33905 | Peroxisomal membrane 22 kDa (Mpv17/PMP22) family protein | -0.64 | 0.31 | -0.31 | |||
18 | AT3G45710 | Major facilitator superfamily protein | 0.64 | 0.31 | -0.3 | |||
19 | AT2G14930 | transposable element gene | -0.64 | 0.31 | -0.31 | |||
20 | AT3G18990 | AP2/B3-like transcriptional factor family protein | REPRODUCTIVE MERISTEM 39, REDUCED VERNALIZATION RESPONSE 1 |
0.64 | 0.29 | -0.33 | ||
21 | AT1G09530 | phytochrome interacting factor 3 | PHYTOCHROME-ASSOCIATED PROTEIN 3, phytochrome interacting factor 3, PHOTOCURRENT 1 |
-0.64 | 0.35 | -0.33 | ||
22 | AT2G38530 | lipid transfer protein 2 | cell growth defect factor-3, LP2, lipid transfer protein 2 |
-0.63 | 0.32 | -0.33 | ||
23 | AT3G19400 | Cysteine proteinases superfamily protein | 0.63 | 0.31 | -0.3 | |||
24 | AT2G24000 | serine carboxypeptidase-like 22 | serine carboxypeptidase-like 22 | 0.63 | 0.32 | -0.33 | ||
25 | AT2G21650 | Homeodomain-like superfamily protein | ARABIDOPSIS RAD-LIKE 2, MATERNAL EFFECT EMBRYO ARREST 3, RADIALIS-LIKE SANT/MYB 1 |
0.63 | 0.34 | -0.32 | ||
26 | AT3G55030 | phosphatidylglycerolphosphate synthase 2 | phosphatidylglycerolphosphate synthase 2 |
-0.63 | 0.32 | -0.32 | ||
27 | AT4G00230 | xylem serine peptidase 1 | xylem serine peptidase 1 | 0.62 | 0.32 | -0.31 | ||
28 | AT1G76940 | RNA-binding (RRM/RBD/RNP motifs) family protein | -0.62 | 0.33 | -0.33 | |||
29 | AT5G57760 | unknown protein; Has 5 Blast hits to 5 proteins in 2 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 5; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). |
-0.62 | 0.33 | -0.31 | |||
30 | AT5G40070 | MADS-box family protein | -0.62 | 0.33 | -0.33 | |||
31 | AT5G44860 | unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT4G19950.1); Has 233 Blast hits to 227 proteins in 25 species: Archae - 0; Bacteria - 13; Metazoa - 1; Fungi - 0; Plants - 216; Viruses - 0; Other Eukaryotes - 3 (source: NCBI BLink). |
0.62 | 0.32 | -0.31 | |||
32 | AT1G60160 | Potassium transporter family protein | -0.62 | 0.3 | -0.35 | |||
33 | AT1G63850 | BTB/POZ domain-containing protein | -0.61 | 0.3 | -0.31 | |||
34 | AT1G32540 | lsd one like 1 | lsd one like 1 | -0.61 | 0.29 | -0.32 | ||
35 | AT5G47770 | farnesyl diphosphate synthase 1 | farnesyl diphosphate synthase 1 | 0.61 | 0.31 | -0.31 | ||
36 | AT2G44570 | glycosyl hydrolase 9B12 | glycosyl hydrolase 9B12, glycosyl hydrolase 9B12 |
-0.6 | 0.34 | -0.32 | ||
37 | AT3G50130 | Plant protein of unknown function (DUF247) | 0.6 | 0.31 | -0.31 | |||
38 | AT1G22550 | Major facilitator superfamily protein | 0.6 | 0.3 | -0.33 | |||
39 | AT5G57240 | OSBP(oxysterol binding protein)-related protein 4C | OSBP(oxysterol binding protein)-related protein 4C |
-0.6 | 0.34 | -0.32 | ||
40 | AT4G29740 | cytokinin oxidase 4 | ATCKX4, cytokinin oxidase 4 | 0.59 | 0.32 | -0.32 | ||
41 | AT2G39980 | HXXXD-type acyl-transferase family protein | -0.59 | 0.3 | -0.31 | |||
42 | AT1G62290 | Saposin-like aspartyl protease family protein | -0.59 | 0.31 | -0.32 | |||
43 | AT5G44260 | Zinc finger C-x8-C-x5-C-x3-H type family protein | -0.59 | 0.33 | -0.31 | |||
44 | AT4G04955 | allantoinase | allantoinase, allantoinase | 0.59 | 0.31 | -0.33 | ||
45 | ATCG00630 | PSAJ | PSAJ | -0.58 | 0.28 | -0.33 | ||
46 | AT5G17780 | alpha/beta-Hydrolases superfamily protein | -0.58 | 0.31 | -0.32 | |||
47 | AT4G22410 | Ubiquitin C-terminal hydrolases superfamily protein | -0.58 | 0.32 | -0.31 | |||
48 | AT5G61050 | histone deacetylase-related / HD-related | -0.58 | 0.3 | -0.32 | |||
49 | AT1G46768 | related to AP2 1 | related to AP2 1 | -0.58 | 0.32 | -0.3 | ||
50 | AT1G64590 | NAD(P)-binding Rossmann-fold superfamily protein | 0.58 | 0.33 | -0.31 | |||
51 | AT2G36470 | Plant protein of unknown function (DUF868) | -0.58 | 0.3 | -0.32 | |||
52 | AT5G48230 | acetoacetyl-CoA thiolase 2 | acetoacetyl-CoA thiolase 2, EMBRYO DEFECTIVE 1276 |
0.58 | 0.3 | -0.31 | ||
53 | AT5G50340 | ATP-dependent peptidases;nucleotide binding;serine-type endopeptidases;DNA helicases;ATP binding;damaged DNA binding;nucleoside-triphosphatases |
-0.58 | 0.29 | -0.33 | |||
54 | AT3G52340 | sucrose-6F-phosphate phosphohydrolase 2 | SUCROSE-PHOSPHATASE 2, sucrose-6F-phosphate phosphohydrolase 2 |
-0.57 | 0.33 | -0.3 | ||
55 | AT2G41900 | CCCH-type zinc finger protein with ARM repeat domain | OXIDATIVE STRESS 2 | -0.57 | 0.3 | -0.31 | ||
56 | AT5G54380 | protein kinase family protein | THESEUS1 | 0.57 | 0.31 | -0.31 | ||
57 | AT4G39235 | unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G05570.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). |
-0.57 | 0.32 | -0.31 | |||
58 | AT2G38840 | Guanylate-binding family protein | 0.56 | 0.3 | -0.32 | |||
59 | AT4G35350 | xylem cysteine peptidase 1 | xylem cysteine peptidase 1 | 0.56 | 0.34 | -0.3 | ||
60 | AT5G46270 | Disease resistance protein (TIR-NBS-LRR class) family | -0.56 | 0.32 | -0.31 | |||
61 | AT4G35720 | Arabidopsis protein of unknown function (DUF241) | -0.56 | 0.31 | -0.3 | |||
62 | AT1G35560 | TCP family transcription factor | -0.56 | 0.34 | -0.33 | |||
63 | AT3G14560 | unknown protein; Has 6 Blast hits to 6 proteins in 3 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 6; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). |
-0.56 | 0.32 | -0.3 | |||
64 | AT2G25420 | transducin family protein / WD-40 repeat family protein | -0.56 | 0.31 | -0.29 | |||
65 | AT1G72140 | Major facilitator superfamily protein | 0.56 | 0.32 | -0.34 | |||
66 | AT1G66310 | F-box/RNI-like/FBD-like domains-containing protein | -0.55 | 0.32 | -0.33 | |||
67 | AT2G38350 | unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: mitochondrion; Has 1 Blast hits to 1 proteins in 1 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 1; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). |
-0.55 | 0.34 | -0.33 | |||
68 | AT2G02310 | phloem protein 2-B6 | phloem protein 2-B6, phloem protein 2-B6 |
0.55 | 0.32 | -0.31 | ||
69 | AT1G05530 | UDP-glucosyl transferase 75B2 | UDP-GLUCOSYL TRANSFERASE 2, UDP-glucosyl transferase 75B2 |
0.55 | 0.31 | -0.33 | ||
70 | AT4G37580 | Acyl-CoA N-acyltransferases (NAT) superfamily protein | CONSTITUTIVE PHOTOMORPHOGENIC 3, HOOKLESS 1, UNUSUAL SUGAR RESPONSE 2 |
-0.55 | 0.32 | -0.32 | ||
71 | AT3G59390 | unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF2054 (InterPro:IPR019352); Has 184 Blast hits to 184 proteins in 72 species: Archae - 0; Bacteria - 0; Metazoa - 116; Fungi - 0; Plants - 43; Viruses - 0; Other Eukaryotes - 25 (source: NCBI BLink). |
-0.55 | 0.33 | -0.31 | |||
72 | AT1G06850 | basic leucine-zipper 52 | basic leucine-zipper 52, basic leucine-zipper 52 |
0.55 | 0.33 | -0.35 | ||
73 | AT5G51030 | NAD(P)-binding Rossmann-fold superfamily protein | 0.55 | 0.33 | -0.33 | |||
74 | AT4G03140 | NAD(P)-binding Rossmann-fold superfamily protein | -0.55 | 0.31 | -0.35 | |||
75 | AT5G26731 | unknown protein; Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). |
-0.55 | 0.31 | -0.3 | |||
76 | AT3G25110 | fatA acyl-ACP thioesterase | fatA acyl-ACP thioesterase, fatA acyl-ACP thioesterase |
0.55 | 0.3 | -0.33 | ||
77 | AT3G63470 | serine carboxypeptidase-like 40 | serine carboxypeptidase-like 40 | 0.55 | 0.33 | -0.28 | ||
78 | AT5G19850 | alpha/beta-Hydrolases superfamily protein | -0.55 | 0.31 | -0.3 | |||
79 | AT2G02610 | Cysteine/Histidine-rich C1 domain family protein | 0.55 | 0.3 | -0.33 | |||
80 | AT1G34090 | transposable element gene | -0.54 | 0.3 | -0.33 | |||
81 | AT5G46330 | Leucine-rich receptor-like protein kinase family protein | FLAGELLIN-SENSITIVE 2 | -0.54 | 0.32 | -0.32 | ||
82 | AT5G48340 | unknown protein; Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). |
-0.54 | 0.32 | -0.31 | |||
83 | AT3G20130 | cytochrome P450, family 705, subfamily A, polypeptide 22 | cytochrome P450, family 705, subfamily A, polypeptide 22, gravity persistence signal 1 |
0.54 | 0.32 | -0.32 | ||
84 | AT5G22590 | Leucine Rich Repeat protein family | 0.54 | 0.32 | -0.31 | |||
85 | AT3G14880 | BEST Arabidopsis thaliana protein match is: transcription factor-related (TAIR:AT4G18650.1); Has 560 Blast hits to 560 proteins in 40 species: Archae - 0; Bacteria - 0; Metazoa - 2; Fungi - 0; Plants - 558; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). |
-0.54 | 0.32 | -0.32 | |||
86 | AT2G11680 | transposable element gene | 0.54 | 0.3 | -0.32 | |||
87 | AT1G04310 | ethylene response sensor 2 | ethylene response sensor 2 | -0.54 | 0.32 | -0.31 | ||
88 | AT1G27140 | glutathione S-transferase tau 14 | glutathione S-transferase tau 14, GLUTATHIONE S-TRANSFERASE 13, glutathione S-transferase tau 14 |
0.54 | 0.31 | -0.32 | ||
89 | AT4G18590 | Nucleic acid-binding, OB-fold-like protein | -0.53 | 0.31 | -0.31 | |||
90 | AT3G20090 | cytochrome P450, family 705, subfamily A, polypeptide 18 | cytochrome P450, family 705, subfamily A, polypeptide 18 |
0.53 | 0.33 | -0.33 | ||
91 | AT2G18620 | Terpenoid synthases superfamily protein | 0.53 | 0.31 | -0.33 | |||
92 | AT2G34450 | HMG-box (high mobility group) DNA-binding family protein | -0.53 | 0.31 | -0.33 | |||
93 | AT1G13190 | RNA-binding (RRM/RBD/RNP motifs) family protein | 0.53 | 0.31 | -0.32 | |||
94 | AT3G06130 | Heavy metal transport/detoxification superfamily protein | 0.53 | 0.31 | -0.32 | |||
95 | AT2G01500 | Homeodomain-like superfamily protein | HIGH EXPRESSION OF OSMOTICALLY RESPONSIVE GENE 9, PRETTY FEW SEEDS 2, WUSCHEL RELATED HOMEOBOX 6 |
-0.53 | 0.34 | -0.33 | ||
96 | AT3G59910 | Ankyrin repeat family protein | -0.52 | 0.31 | -0.29 | |||
97 | AT3G25890 | Integrase-type DNA-binding superfamily protein | cytokinin response factor 11 | -0.52 | 0.32 | -0.32 | ||
98 | AT5G28860 | transposable element gene | 0.52 | 0.32 | -0.3 | |||
99 | AT2G35750 | unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; Has 1 Blast hits to 1 proteins in 1 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 1; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). |
-0.52 | 0.31 | -0.33 | |||
100 | AT1G09280 | CONTAINS InterPro DOMAIN/s: Rhodanese-like (InterPro:IPR001763), Serine hydrolase (InterPro:IPR005645); BEST Arabidopsis thaliana protein match is: Rhodanese/Cell cycle control phosphatase superfamily protein (TAIR:AT2G40760.1); Has 5925 Blast hits to 5912 proteins in 1592 species: Archae - 0; Bacteria - 2946; Metazoa - 156; Fungi - 408; Plants - 229; Viruses - 0; Other Eukaryotes - 2186 (source: NCBI BLink). |
-0.52 | 0.35 | -0.32 | |||
101 | AT3G60520 | unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G02070.1); Has 107 Blast hits to 107 proteins in 14 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 107; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). |
-0.52 | 0.36 | -0.32 | |||
102 | AT1G73610 | GDSL-like Lipase/Acylhydrolase superfamily protein | -0.52 | 0.32 | -0.3 | |||
103 | AT4G38870 | F-box and associated interaction domains-containing protein | -0.52 | 0.3 | -0.3 | |||
104 | AT1G78990 | HXXXD-type acyl-transferase family protein | 0.52 | 0.31 | -0.3 | |||
105 | AT5G47880 | eukaryotic release factor 1-1 | eukaryotic release factor 1-1 | -0.52 | 0.32 | -0.33 | ||
106 | AT1G75860 | unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G20100.1); Has 258 Blast hits to 235 proteins in 58 species: Archae - 0; Bacteria - 4; Metazoa - 59; Fungi - 16; Plants - 90; Viruses - 0; Other Eukaryotes - 89 (source: NCBI BLink). |
-0.52 | 0.31 | -0.28 | |||
107 | AT1G57670 | Toll-Interleukin-Resistance (TIR) domain family protein | 0.51 | 0.32 | -0.3 |