AT4G11970 : -
Query Information
Cytoscape Web will replace the contents of this div with your graph.
AGICode AT4G11970
Description YTH family protein
Gene information
Help   
  Gene Code Description / Information Gene name Correlation link
pcc 2.5% 97.5% PPI
1 AT4G11970 YTH family protein 1 0.33 -0.31
2 AT4G23320 cysteine-rich RLK (RECEPTOR-like protein kinase) 24 cysteine-rich RLK (RECEPTOR-like
protein kinase) 24		 -0.76 0.3 -0.31
3 AT1G70920 homeobox-leucine zipper protein 18 homeobox-leucine zipper protein
18, homeobox-leucine zipper
protein 18		 -0.7 0.3 -0.32
4 AT1G35380 transposable element gene -0.69 0.31 -0.34
5 AT2G28070 ABC-2 type transporter family protein ATP-binding cassette G3 0.68 0.33 -0.3
6 AT3G42730 transposable element gene -0.67 0.32 -0.3
7 AT3G42290 transposable element gene -0.67 0.32 -0.28
8 AT1G42710 General transcription factor 2-related zinc finger protein 0.67 0.3 -0.32
9 AT4G20060 ARM repeat superfamily protein EMBRYO DEFECTIVE 1895 0.67 0.31 -0.3
10 AT1G08080 alpha carbonic anhydrase 7 alpha carbonic anhydrase 7, A.
THALIANA ALPHA CARBONIC ANHYDRASE
7		 0.67 0.31 -0.32
11 AT5G47280 ADR1-like 3 ADR1-like 3 0.67 0.31 -0.31
12 AT4G11850 phospholipase D gamma 1 maternal effect embryo arrest 54,
phospholipase D gamma 1		 -0.67 0.32 -0.33
13 AT2G36720 Acyl-CoA N-acyltransferase with RING/FYVE/PHD-type zinc
finger domain		 0.66 0.31 -0.32
14 AT1G49270 Protein kinase superfamily protein proline-rich extensin-like
receptor kinase 7, proline-rich
extensin-like receptor kinase 7		 -0.66 0.31 -0.31
15 AT2G04540 Beta-ketoacyl synthase 0.66 0.33 -0.33
16 AT2G11120 transposable element gene 0.66 0.31 -0.32
17 AT5G57320 villin, putative villin 5 0.66 0.31 -0.3
18 AT3G05260 NAD(P)-binding Rossmann-fold superfamily protein -0.66 0.3 -0.3
19 AT1G28560 snRNA activating complex family protein SHOOT REDIFFERENTIATION DEFECTIVE
2		 0.65 0.33 -0.31
20 AT1G18340 basal transcription factor complex subunit-related 0.65 0.31 -0.32
21 AT1G72290 Kunitz family trypsin and protease inhibitor protein 0.64 0.29 -0.3
22 AT5G18160 F-box and associated interaction domains-containing protein -0.64 0.31 -0.31
23 AT2G14910 unknown protein; LOCATED IN: chloroplast; EXPRESSED IN: 24
plant structures; EXPRESSED DURING: 15 growth stages; BEST
Arabidopsis thaliana protein match is: unknown protein
(TAIR:AT5G14970.1); Has 605 Blast hits to 425 proteins in
102 species: Archae - 0; Bacteria - 300; Metazoa - 25;
Fungi - 0; Plants - 89; Viruses - 0; Other Eukaryotes - 191
(source: NCBI BLink).		 0.64 0.31 -0.33
24 AT1G21300 transposable element gene -0.64 0.32 -0.32
25 AT2G35910 RING/U-box superfamily protein -0.64 0.31 -0.32
26 AT1G65110 Ubiquitin carboxyl-terminal hydrolase-related protein -0.63 0.31 -0.3
27 AT3G15130 Tetratricopeptide repeat (TPR)-like superfamily protein -0.63 0.31 -0.3
28 AT3G57460 catalytics;metal ion binding -0.63 0.29 -0.32
29 AT2G25300 Galactosyltransferase family protein 0.63 0.29 -0.31
30 AT2G03410 Mo25 family protein -0.63 0.3 -0.32
31 AT3G59410 protein kinase family protein ARABIDOPSIS THALIANA GENERAL
CONTROL NON-REPRESSIBLE 2, GENERAL
CONTROL NON-REPRESSIBLE 2		 0.63 0.3 -0.34
32 AT1G58210 kinase interacting family protein EMBRYO DEFECTIVE 1674 0.63 0.3 -0.35
33 AT5G07700 myb domain protein 76 myb domain protein 76, myb domain
protein 76		 0.63 0.31 -0.35
34 AT2G44900 ARABIDILLO-1 ARABIDILLO-1, F-box Armadillo
protein 1		 0.62 0.31 -0.33
35 AT3G05460 sporozoite surface protein-related -0.62 0.3 -0.32
36 AT2G28680 RmlC-like cupins superfamily protein 0.62 0.33 -0.3
37 AT3G29690 HXXXD-type acyl-transferase family protein -0.62 0.29 -0.35
38 AT5G19710 BEST Arabidopsis thaliana protein match is: HPT
phosphotransmitter 4 (TAIR:AT3G16360.2); Has 1807 Blast
hits to 1807 proteins in 277 species: Archae - 0; Bacteria
- 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0;
Other Eukaryotes - 339 (source: NCBI BLink).		 -0.62 0.31 -0.32
39 AT2G33240 myosin XI D MYOSIN XI D, myosin XI D -0.61 0.3 -0.32
40 AT1G08340 Rho GTPase activating protein with PAK-box/P21-Rho-binding
domain		 -0.61 0.31 -0.33
41 AT4G30820 cyclin-dependent kinase-activating kinase assembly
factor-related / CDK-activating kinase assembly
factor-related		 0.61 0.31 -0.33
42 AT1G61750 Receptor-like protein kinase-related family protein -0.61 0.31 -0.32
43 AT5G23270 sugar transporter 11 SUGAR TRANSPORTER 11, sugar
transporter 11		 -0.61 0.33 -0.28
44 AT3G28560 BCS1 AAA-type ATPase -0.61 0.31 -0.33
45 AT5G24970 Protein kinase superfamily protein 0.61 0.31 -0.32
46 AT1G18280 Bifunctional inhibitor/lipid-transfer protein/seed storage
2S albumin superfamily protein		 -0.6 0.32 -0.3
47 AT2G30930 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
chloroplast, plasma membrane, membrane; EXPRESSED IN: 24
plant structures; EXPRESSED DURING: 14 growth stages; BEST
Arabidopsis thaliana protein match is: unknown protein
(TAIR:AT1G06540.1); Has 194 Blast hits to 176 proteins in
78 species: Archae - 0; Bacteria - 101; Metazoa - 15; Fungi
- 25; Plants - 12; Viruses - 4; Other Eukaryotes - 37
(source: NCBI BLink).		 -0.6 0.31 -0.3
48 AT2G25500 Inosine triphosphate pyrophosphatase family protein -0.6 0.33 -0.32
49 AT2G41580 transposable element gene -0.6 0.31 -0.32
50 AT5G02000 unknown protein; Has 5 Blast hits to 5 proteins in 2
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 5; Viruses - 0; Other Eukaryotes - 0 (source: NCBI
BLink).		 -0.6 0.31 -0.29
51 AT2G18720 Translation elongation factor EF1A/initiation factor
IF2gamma family protein		 -0.6 0.29 -0.31
52 AT3G09880 Protein phosphatase 2A regulatory B subunit family protein ATB' BETA 0.6 0.29 -0.31
53 AT2G23860 pseudogene, similar to VAP27, blastp match of 56% identity
and 1.3e-25 P-value to GP|6688926|emb|CAB65313.1||AJ251365
VAP27 {Nicotiana plumbaginifolia}		 0.6 0.32 -0.34
54 AT2G01810 RING/FYVE/PHD zinc finger superfamily protein -0.6 0.32 -0.3
55 AT2G04000 transposable element gene -0.59 0.32 -0.31
56 AT1G35970 transposable element gene 0.59 0.32 -0.31
57 AT4G01700 Chitinase family protein -0.59 0.3 -0.32
58 AT2G41620 Nucleoporin interacting component (Nup93/Nic96-like) family
protein		 0.59 0.33 -0.3
59 AT5G02690 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
endomembrane system; EXPRESSED IN: 11 plant structures;
EXPRESSED DURING: 9 growth stages; Has 2 Blast hits to 2
proteins in 1 species: Archae - 0; Bacteria - 0; Metazoa -
0; Fungi - 0; Plants - 2; Viruses - 0; Other Eukaryotes - 0
(source: NCBI BLink).		 0.59 0.33 -0.29
60 AT2G32630 Pentatricopeptide repeat (PPR-like) superfamily protein 0.59 0.34 -0.31
61 AT4G15520 tRNA/rRNA methyltransferase (SpoU) family protein 0.59 0.31 -0.31
62 AT3G07330 Cellulose-synthase-like C6 ATCSLC06, Cellulose-synthase-like
C6, CELLULOSE-SYNTHASE LIKE C6,
Cellulose-synthase-like C6		 -0.59 0.32 -0.3
63 AT5G17410 Spc97 / Spc98 family of spindle pole body (SBP) component 0.59 0.31 -0.3
64 AT3G30650 transposable element gene 0.59 0.31 -0.32
65 AT5G61650 CYCLIN P4;2 CYCP4, CYCLIN P4;2 -0.59 0.29 -0.34
66 AT5G30520 unknown protein; Has 50 Blast hits to 50 proteins in 2
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 50; Viruses - 0; Other Eukaryotes - 0 (source:
NCBI BLink).		 -0.59 0.31 -0.35
67 AT4G19350 embryo defective 3006 embryo defective 3006 0.59 0.3 -0.32
68 AT2G01800 COP1-interacting protein-related -0.58 0.31 -0.3
69 AT5G55900 Sucrase/ferredoxin-like family protein 0.58 0.31 -0.32
70 AT5G41720 BEST Arabidopsis thaliana protein match is: F-box
protein-related (TAIR:AT1G64290.1); Has 70 Blast hits to 70
proteins in 11 species: Archae - 0; Bacteria - 0; Metazoa -
0; Fungi - 0; Plants - 70; Viruses - 0; Other Eukaryotes -
0 (source: NCBI BLink).		 0.58 0.31 -0.32
71 AT1G60200 splicing factor PWI domain-containing protein / RNA
recognition motif (RRM)-containing protein		 0.58 0.32 -0.31
72 AT4G05300 transposable element gene -0.58 0.32 -0.32
73 AT4G10090 elongator protein 6 elongator protein 6 0.58 0.33 -0.33
74 AT3G29430 Terpenoid synthases superfamily protein -0.58 0.33 -0.31
75 AT5G04390 C2H2-type zinc finger family protein -0.58 0.3 -0.32
76 AT5G09430 alpha/beta-Hydrolases superfamily protein -0.58 0.31 -0.33
77 AT5G49370 Pleckstrin homology (PH) domain superfamily protein 0.58 0.33 -0.32
78 AT3G52490 Double Clp-N motif-containing P-loop nucleoside
triphosphate hydrolases superfamily protein		 0.58 0.28 -0.32
79 AT2G27980 Acyl-CoA N-acyltransferase with RING/FYVE/PHD-type zinc
finger domain		 0.58 0.3 -0.31
80 AT1G32050 SCAMP family protein 0.57 0.31 -0.31
81 ATMG00840 hypothetical protein ORF121B -0.57 0.32 -0.32
82 AT4G18400 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED
DURING: 13 growth stages; Has 30201 Blast hits to 17322
proteins in 780 species: Archae - 12; Bacteria - 1396;
Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0;
Other Eukaryotes - 2996 (source: NCBI BLink).		 0.57 0.29 -0.31
83 AT1G26170 ARM repeat superfamily protein 0.57 0.31 -0.32
84 AT5G44820 Nucleotide-diphospho-sugar transferase family protein -0.57 0.31 -0.33
85 AT2G05870 transposable element gene 0.57 0.32 -0.3
86 AT2G15260 RING/U-box superfamily protein 0.57 0.34 -0.31
87 AT4G25610 C2H2-like zinc finger protein -0.57 0.3 -0.33
88 AT2G44420 protein N-terminal asparagine amidohydrolase family protein 0.57 0.31 -0.3
89 AT2G06500 hAT family dimerisation domain -0.57 0.32 -0.3
90 AT1G31450 Eukaryotic aspartyl protease family protein 0.56 0.3 -0.33
91 AT1G54320 LEM3 (ligand-effect modulator 3) family protein / CDC50
family protein		 -0.56 0.34 -0.33
92 AT4G22430 F-box family protein -0.56 0.33 -0.31
93 AT5G08490 Tetratricopeptide repeat (TPR)-like superfamily protein SLOW GROWTH 1 0.56 0.31 -0.29
94 AT4G13800 Protein of unknown function (DUF803) -0.56 0.31 -0.31
95 AT1G03910 EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 13
growth stages; CONTAINS InterPro DOMAIN/s: Cactin protein,
cactus-binding domain, C-terminal (InterPro:IPR019134),
Cactin, central region (InterPro:IPR018816); BEST
Arabidopsis thaliana protein match is: unknown protein
(TAIR:AT2G36815.2); Has 11711 Blast hits to 7382 proteins
in 452 species: Archae - 31; Bacteria - 352; Metazoa -
6006; Fungi - 1138; Plants - 599; Viruses - 33; Other
Eukaryotes - 3552 (source: NCBI BLink).		 0.56 0.32 -0.29
96 AT1G58330 transcription factor-related ZW2 -0.56 0.32 -0.3
97 AT4G09960 K-box region and MADS-box transcription factor family
protein 		AGAMOUS-like 11, SEEDSTICK -0.56 0.31 -0.32
98 AT1G15990 cyclic nucleotide gated channel 7 cyclic nucleotide gated channel 7,
cyclic nucleotide gated channel 7		 0.56 0.31 -0.31
99 AT1G27520 Glycosyl hydrolase family 47 protein 0.56 0.32 -0.33
100 AT5G16610 unknown protein; Has 30201 Blast hits to 17322 proteins in
780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338;
Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes
- 2996 (source: NCBI BLink).		 0.56 0.3 -0.32
101 AT5G16260 RNA binding (RRM/RBD/RNP motifs) family protein EARLY FLOWERING 9 0.55 0.33 -0.32
102 AT1G18940 Nodulin-like / Major Facilitator Superfamily protein -0.55 0.33 -0.33
103 AT1G76170 2-thiocytidine tRNA biosynthesis protein, TtcA 0.55 0.32 -0.31
104 AT5G61510 GroES-like zinc-binding alcohol dehydrogenase family
protein		 -0.55 0.32 -0.3
105 AT2G26620 Pectin lyase-like superfamily protein -0.55 0.32 -0.32
106 AT1G16130 wall associated kinase-like 2 wall associated kinase-like 2 -0.55 0.3 -0.32
107 AT1G16360 LEM3 (ligand-effect modulator 3) family protein / CDC50
family protein		 -0.55 0.33 -0.32
108 AT4G29050 Concanavalin A-like lectin protein kinase family protein -0.55 0.31 -0.3
109 AT4G36940 nicotinate phosphoribosyltransferase 1 nicotinate
phosphoribosyltransferase 1		 0.55 0.3 -0.36
110 AT5G13990 exocyst subunit exo70 family protein C2 exocyst subunit exo70 family
protein C2, exocyst subunit exo70
family protein C2		 -0.55 0.35 -0.34
111 AT5G53240 Protein of unknown function (DUF295) -0.55 0.32 -0.29
112 AT2G20142 Toll-Interleukin-Resistance (TIR) domain family protein -0.55 0.33 -0.29
113 AT1G63210 Transcription elongation factor Spt6 0.54 0.28 -0.32
114 AT1G22660 Polynucleotide adenylyltransferase family protein 0.54 0.31 -0.32
Metabolite information
Help   
  CID Metabolite name Pathway Information Correlation link
Compound name Stereochemistry Aracyc name pcc 2.5% 97.5% PPI
115 C0256 Tryptamine - Tryptamine IAA biosynthesis I 0.81 0.44 -0.45 C0256
116 C0010 myo-Inositol-1-phosphate D,L-myo-Inositol-1-phosphate 1D-myo-Inositol (3)-phosphate myo-inositol biosynthesis,
1D-myo-inositol hexakisphosphate biosynthesis III (Spirodela polyrrhiza) 		0.71 0.47 -0.44 C0010
117 C0230 Rutin - - polyphenol biosynthesis -0.65 0.46 -0.47
118 C0096 Gluconic acid - D-Gluconate - -0.59 0.46 -0.48 C0096