AT4G12220 : -
Query Information
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AGICode AT4G12220
Description BEST Arabidopsis thaliana protein match is: RING/U-box superfamily protein (TAIR:AT4G12210.1); Has 24 Blast hits to 21 proteins in 2 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 24; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).
Gene information
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  Gene Code Description / Information Gene name Correlation link
pcc 2.5% 97.5% PPI
1 AT4G12220 BEST Arabidopsis thaliana protein match is: RING/U-box
superfamily protein (TAIR:AT4G12210.1); Has 24 Blast hits
to 21 proteins in 2 species: Archae - 0; Bacteria - 0;
Metazoa - 0; Fungi - 0; Plants - 24; Viruses - 0; Other
Eukaryotes - 0 (source: NCBI BLink).		 1 0.31 -0.32
2 AT4G21500 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
endomembrane system; BEST Arabidopsis thaliana protein
match is: unknown protein (TAIR:AT4G05018.1); Has 20 Blast
hits to 20 proteins in 8 species: Archae - 0; Bacteria - 0;
Metazoa - 0; Fungi - 0; Plants - 17; Viruses - 0; Other
Eukaryotes - 3 (source: NCBI BLink).		 -0.67 0.32 -0.34
3 AT4G24950 unknown protein; Has 4 Blast hits to 4 proteins in 2
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 4; Viruses - 0; Other Eukaryotes - 0 (source: NCBI
BLink).		 0.67 0.31 -0.34
4 AT3G45830 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
cellular_component unknown; EXPRESSED IN: 24 plant
structures; EXPRESSED DURING: 15 growth stages; BEST
Arabidopsis thaliana protein match is: unknown protein
(TAIR:AT1G02290.1); Has 499 Blast hits to 438 proteins in
100 species: Archae - 0; Bacteria - 7; Metazoa - 236; Fungi
- 15; Plants - 108; Viruses - 2; Other Eukaryotes - 131
(source: NCBI BLink).		 -0.67 0.32 -0.32
5 AT2G20500 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
mitochondrion; EXPRESSED IN: 21 plant structures; EXPRESSED
DURING: 13 growth stages; Has 13 Blast hits to 13 proteins
in 5 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi
- 0; Plants - 13; Viruses - 0; Other Eukaryotes - 0
(source: NCBI BLink).		 -0.65 0.33 -0.32
6 AT3G17630 cation/H+ exchanger 19 cation/H+ exchanger 19, cation/H+
exchanger 19		 0.64 0.3 -0.31
7 AT2G04300 Leucine-rich repeat protein kinase family protein -0.63 0.31 -0.31
8 AT1G22670 Protease-associated (PA) RING/U-box zinc finger family
protein		 0.63 0.33 -0.31
9 AT4G10490 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase
superfamily protein		 0.63 0.33 -0.31
10 AT1G54280 ATPase E1-E2 type family protein / haloacid
dehalogenase-like hydrolase family protein		 0.62 0.3 -0.3
11 AT5G04310 Pectin lyase-like superfamily protein 0.62 0.31 -0.32
12 AT5G65540 unknown protein; Has 6825 Blast hits to 3811 proteins in
289 species: Archae - 0; Bacteria - 184; Metazoa - 2139;
Fungi - 760; Plants - 816; Viruses - 52; Other Eukaryotes -
2874 (source: NCBI BLink).		 -0.61 0.31 -0.32
13 AT1G57570 Mannose-binding lectin superfamily protein 0.61 0.33 -0.32
14 AT3G56960 phosphatidyl inositol monophosphate 5 kinase 4 phosphatidyl inositol
monophosphate 5 kinase 4		 0.61 0.31 -0.31
15 AT2G15360 BEST Arabidopsis thaliana protein match is:
fucosyltransferase 4 (TAIR:AT2G15390.2); Has 38 Blast hits
to 35 proteins in 2 species: Archae - 0; Bacteria - 0;
Metazoa - 0; Fungi - 0; Plants - 38; Viruses - 0; Other
Eukaryotes - 0 (source: NCBI BLink).		 -0.61 0.3 -0.31
16 AT1G10400 UDP-Glycosyltransferase superfamily protein 0.61 0.3 -0.31
17 AT5G64905 elicitor peptide 3 precursor elicitor peptide 3 precursor 0.61 0.29 -0.33
18 AT5G60310 Concanavalin A-like lectin protein kinase family protein 0.61 0.3 -0.3
19 AT2G17430 Seven transmembrane MLO family protein ATMLO7, MILDEW RESISTANCE LOCUS O
7, NORTIA		 0.61 0.32 -0.31
20 AT5G14860 UDP-Glycosyltransferase superfamily protein -0.6 0.31 -0.32
21 AT4G07380 unknown protein; Has 30201 Blast hits to 17322 proteins in
780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338;
Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes
- 2996 (source: NCBI BLink).		 0.6 0.31 -0.31
22 AT1G69660 TRAF-like family protein -0.6 0.32 -0.32
23 AT3G18910 EIN2 targeting protein2 EIN2 targeting protein2 -0.6 0.31 -0.32
24 AT4G18850 unknown protein; Has 6 Blast hits to 6 proteins in 2
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 6; Viruses - 0; Other Eukaryotes - 0 (source: NCBI
BLink).		 -0.59 0.31 -0.32
25 AT5G40940 putative fasciclin-like arabinogalactan protein 20 putative fasciclin-like
arabinogalactan protein 20		 0.59 0.32 -0.31
26 AT5G63390 O-fucosyltransferase family protein 0.59 0.32 -0.31
27 AT3G50160 Plant protein of unknown function (DUF247) 0.59 0.34 -0.31
28 AT4G05140 Nucleoside transporter family protein -0.58 0.31 -0.3
29 AT1G44740 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
mitochondrion; EXPRESSED IN: embryo, leaf whorl, flower,
seed; EXPRESSED DURING: F mature embryo stage, petal
differentiation and expansion stage, E expanded cotyledon
stage, D bilateral stage; Has 8 Blast hits to 7 proteins in
3 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi -
1; Plants - 7; Viruses - 0; Other Eukaryotes - 0 (source:
NCBI BLink).		 0.58 0.32 -0.32
30 AT5G60720 Protein of unknown function, DUF547 -0.58 0.31 -0.31
31 AT1G43760 DNAse I-like superfamily protein 0.58 0.29 -0.29
32 AT1G79400 cation/H+ exchanger 2 cation/H+ exchanger 2, cation/H+
exchanger 2		 0.58 0.3 -0.3
33 AT4G16680 P-loop containing nucleoside triphosphate hydrolases
superfamily protein		 -0.58 0.31 -0.32
34 AT5G65910 BSD domain-containing protein -0.57 0.34 -0.3
35 AT4G29200 Beta-galactosidase related protein -0.57 0.33 -0.3
36 AT3G42830 RING/U-box superfamily protein 0.57 0.33 -0.31
37 AT5G11940 Subtilase family protein -0.57 0.3 -0.31
38 AT3G48880 RNI-like superfamily protein -0.57 0.3 -0.32
39 AT2G38890 unknown protein; Has 58 Blast hits to 54 proteins in 15
species: Archae - 0; Bacteria - 0; Metazoa - 6; Fungi - 0;
Plants - 46; Viruses - 0; Other Eukaryotes - 6 (source:
NCBI BLink).		 0.56 0.3 -0.31
40 AT1G37010 BEST Arabidopsis thaliana protein match is: spindle pole
body component 98 (TAIR:AT5G06680.1); Has 15 Blast hits to
15 proteins in 5 species: Archae - 0; Bacteria - 0; Metazoa
- 0; Fungi - 0; Plants - 15; Viruses - 0; Other Eukaryotes
- 0 (source: NCBI BLink).		 -0.56 0.31 -0.31
41 AT1G75420 UDP-Glycosyltransferase superfamily protein -0.56 0.3 -0.29
42 AT3G25490 Protein kinase family protein 0.55 0.31 -0.3
43 AT1G74190 receptor like protein 15 receptor like protein 15, receptor
like protein 15		 0.55 0.31 -0.34
44 AT2G47020 Peptide chain release factor 1 0.55 0.3 -0.31
45 AT1G07025 Mitochondrial substrate carrier family protein 0.55 0.32 -0.31
46 AT4G11170 Disease resistance protein (TIR-NBS-LRR class) family 0.55 0.31 -0.34
47 ATMG01240 hypothetical protein ORF100C -0.55 0.3 -0.33
48 AT2G06500 hAT family dimerisation domain -0.55 0.33 -0.32
49 AT3G29650 transposable element gene -0.55 0.32 -0.31
50 AT1G25270 nodulin MtN21 /EamA-like transporter family protein 0.55 0.32 -0.32
51 AT5G49290 receptor like protein 56 receptor like protein 56, receptor
like protein 56		 0.54 0.31 -0.31
52 AT5G37380 Chaperone DnaJ-domain superfamily protein -0.54 0.31 -0.32
53 AT4G13800 Protein of unknown function (DUF803) -0.54 0.32 -0.3
54 AT4G15520 tRNA/rRNA methyltransferase (SpoU) family protein 0.54 0.31 -0.3
55 AT2G11270 citrate synthase-related 0.54 0.32 -0.32
56 AT1G72420 NADH:ubiquinone oxidoreductase intermediate-associated
protein 30		 0.54 0.32 -0.33
57 AT5G26960 Galactose oxidase/kelch repeat superfamily protein -0.54 0.33 -0.32
58 AT3G29775 transposable element gene -0.53 0.3 -0.32
59 AT1G27220 paired amphipathic helix repeat-containing protein 0.53 0.32 -0.32
60 AT4G28670 Protein kinase family protein with domain of unknown
function (DUF26)		 -0.53 0.3 -0.31
61 AT2G33270 atypical CYS HIS rich thioredoxin 3 atypical CYS HIS rich thioredoxin
3		 -0.53 0.31 -0.32
62 AT3G45490 BEST Arabidopsis thaliana protein match is: RING/U-box
superfamily protein (TAIR:AT2G25370.1); Has 99 Blast hits
to 96 proteins in 10 species: Archae - 0; Bacteria - 2;
Metazoa - 0; Fungi - 0; Plants - 97; Viruses - 0; Other
Eukaryotes - 0 (source: NCBI BLink).		 -0.53 0.34 -0.3
63 AT5G19090 Heavy metal transport/detoxification superfamily protein -0.53 0.31 -0.32
64 AT1G65640 DegP protease 4 DegP protease 4 -0.52 0.31 -0.31
65 AT3G59460 BEST Arabidopsis thaliana protein match is: F-box family
protein (TAIR:AT3G60040.1); Has 174 Blast hits to 172
proteins in 2 species: Archae - 0; Bacteria - 0; Metazoa -
0; Fungi - 0; Plants - 174; Viruses - 0; Other Eukaryotes -
0 (source: NCBI BLink).		 -0.52 0.3 -0.32
66 AT2G13810 AGD2-like defense response protein 1 AGD2-like defense response protein
1, eds two suppressor 5		 0.52 0.32 -0.3
67 AT4G33925 unknown protein; Has 30201 Blast hits to 17322 proteins in
780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338;
Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes
- 2996 (source: NCBI BLink).		 suppressor of sni1 2 -0.52 0.3 -0.31
68 AT4G07720 pseudogene, hypothetical protein 0.52 0.31 -0.32
69 AT1G52560 HSP20-like chaperones superfamily protein -0.52 0.31 -0.33
70 AT1G54640 F-box family protein-related -0.52 0.32 -0.31
71 AT3G57210 Protein of unknown function (DUF626) -0.52 0.34 -0.3
72 AT2G44420 protein N-terminal asparagine amidohydrolase family protein 0.52 0.32 -0.31
73 AT5G52480 RNI-like superfamily protein -0.52 0.31 -0.31
74 AT1G69670 cullin 3B ARABIDOPSIS THALIANA CULLIN 3B,
cullin 3B		 -0.52 0.32 -0.31
75 AT5G15440 EID1-like 1 EID1-like 1 -0.52 0.3 -0.32
76 AT4G07530 transposable element gene -0.51 0.33 -0.3
77 AT5G35380 Protein kinase protein with adenine nucleotide alpha
hydrolases-like domain		 0.51 0.3 -0.33
78 AT4G27110 COBRA-like protein 11 precursor COBRA-like protein 11 precursor -0.51 0.31 -0.31
79 AT5G53810 O-methyltransferase family protein 0.51 0.32 -0.33
80 AT5G61920 unknown protein; INVOLVED IN: biological_process unknown;
LOCATED IN: chloroplast; EXPRESSED IN: 6 plant structures;
EXPRESSED DURING: 4 anthesis, F mature embryo stage, petal
differentiation and expansion stage, E expanded cotyledon
stage, D bilateral stage; BEST Arabidopsis thaliana protein
match is: unknown protein (TAIR:AT1G67170.1); Has 1807
Blast hits to 1807 proteins in 277 species: Archae - 0;
Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385;
Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).		 -0.51 0.34 -0.36
81 AT1G47540 Scorpion toxin-like knottin superfamily protein -0.51 0.32 -0.32
82 AT4G28900 transposable element gene 0.51 0.31 -0.32
83 AT4G08600 transposable element gene -0.5 0.33 -0.29
84 AT3G58060 Cation efflux family protein -0.5 0.31 -0.31
85 AT3G04370 plasmodesmata-located protein 4 plasmodesmata-located protein 4 0.5 0.32 -0.31
86 AT1G19500 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
endomembrane system; EXPRESSED IN: 9 plant structures;
EXPRESSED DURING: L mature pollen stage, M germinated
pollen stage, 4 anthesis, C globular stage, petal
differentiation and expansion stage; BEST Arabidopsis
thaliana protein match is: unknown protein
(TAIR:AT2G35765.1); Has 9 Blast hits to 9 proteins in 2
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 9; Viruses - 0; Other Eukaryotes - 0 (source: NCBI
BLink).		 -0.5 0.33 -0.31
87 AT5G59260 Concanavalin A-like lectin protein kinase family protein -0.5 0.33 -0.31
88 AT4G39490 cytochrome P450, family 96, subfamily A, polypeptide 10 cytochrome P450, family 96,
subfamily A, polypeptide 10		 0.5 0.29 -0.32
89 AT1G22130 AGAMOUS-like 104 AGAMOUS-like 104 -0.5 0.35 -0.32
90 AT5G03000 Galactose oxidase/kelch repeat superfamily protein 0.5 0.32 -0.34
Metabolite information
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  CID Metabolite name Pathway Information Correlation link
Compound name Stereochemistry Aracyc name pcc 2.5% 97.5% PPI
91 C0001 α-Linolenic acid - (9,12,15)-Linolenate traumatin and (Z)-3-hexen-1-yl acetate biosynthesis,
poly-hydroxy fatty acids biosynthesis,
jasmonic acid biosynthesis 		-0.7 0.46 -0.46 C0001
92 C0144 Maltose D-Maltose α-Maltose starch degradation II -0.65 0.44 -0.43 C0144
93 C0012 n-Eicosanoic acid - Arachidate fatty acid activation,
fatty acid ω-oxidation,
sporopollenin precursor biosynthesis,
acyl-ACP thioesterase pathway,
ceramide degradation,
fatty acid α-oxidation,
fatty acid ω-oxidation,
phospholipases,
triacylglycerol degradation 		-0.61 0.48 -0.45 C0012
94 C0214 PR_MST_2412.1 - - - -0.58 0.48 -0.46