AT4G12240 : -
Query Information
Cytoscape Web will replace the contents of this div with your graph.
AGICode AT4G12240
Description zinc finger (C2H2 type) family protein
Gene information
Help   
  Gene Code Description / Information Gene name Correlation link
pcc 2.5% 97.5% PPI
1 AT4G12240 zinc finger (C2H2 type) family protein 1 0.32 -0.33
2 AT1G64550 general control non-repressible 3 ATP-binding cassette F3, AtABCF3,
AtGCN20, general control
non-repressible 3, general control
non-repressible 20, general
control non-repressible 3,
susceptible to
coronatine-deficient Pst DC3000 5		 0.84 0.32 -0.31
3 AT5G38980 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
endomembrane system; EXPRESSED IN: 22 plant structures;
EXPRESSED DURING: 13 growth stages; Has 3 Blast hits to 3
proteins in 1 species: Archae - 0; Bacteria - 0; Metazoa -
0; Fungi - 0; Plants - 3; Viruses - 0; Other Eukaryotes - 0
(source: NCBI BLink).		 -0.81 0.32 -0.31
4 AT1G55500 evolutionarily conserved C-terminal region 4 evolutionarily conserved
C-terminal region 4		 0.8 0.32 -0.32
5 AT1G04810 26S proteasome regulatory complex, non-ATPase subcomplex,
Rpn2/Psmd1 subunit		 0.79 0.32 -0.31
6 AT5G14450 GDSL-like Lipase/Acylhydrolase superfamily protein -0.79 0.32 -0.32
7 AT2G01620 RNI-like superfamily protein maternal effect embryo arrest 11 -0.79 0.33 -0.29
8 AT1G34640 peptidases -0.79 0.31 -0.32
9 AT2G42690 alpha/beta-Hydrolases superfamily protein -0.78 0.32 -0.31
10 AT4G02350 exocyst complex component sec15B exocyst complex component sec15B 0.78 0.31 -0.33
11 AT2G40090 ABC2 homolog 9 ABC2 homolog 9, ABC2 homolog 9 0.77 0.3 -0.29
12 AT5G15640 Mitochondrial substrate carrier family protein 0.77 0.32 -0.3
13 AT4G30993 Calcineurin-like metallo-phosphoesterase superfamily
protein		 -0.77 0.3 -0.29
14 AT5G16940 carbon-sulfur lyases -0.76 0.32 -0.33
15 AT5G04490 vitamin E pathway gene 5 vitamin E pathway gene 5 -0.76 0.32 -0.32
16 AT4G04910 AAA-type ATPase family protein N-ethylmaleimide sensitive factor 0.76 0.31 -0.3
17 AT2G32730 26S proteasome regulatory complex, non-ATPase subcomplex,
Rpn2/Psmd1 subunit		 0.76 0.32 -0.32
18 AT1G10390 Nucleoporin autopeptidase 0.75 0.33 -0.31
19 AT3G18860 transducin family protein / WD-40 repeat family protein 0.75 0.31 -0.31
20 AT4G33660 unknown protein; Has 30201 Blast hits to 17322 proteins in
780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338;
Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes
- 2996 (source: NCBI BLink).		 -0.74 0.33 -0.32
21 AT3G12670 CTP synthase family protein embryo defective 2742 0.74 0.31 -0.3
22 AT3G03050 cellulose synthase-like D3 CELLULOSE SYNTHASE LIKE D3,
cellulose synthase-like D3, KOJAK,
ROOT HAIR DEFECTIVE 7		 0.74 0.31 -0.32
23 AT4G27800 thylakoid-associated phosphatase 38 PROTEIN PHOSPHATASE 1,
thylakoid-associated phosphatase
38		 -0.74 0.33 -0.31
24 AT2G24280 alpha/beta-Hydrolases superfamily protein -0.74 0.34 -0.3
25 AT1G19960 BEST Arabidopsis thaliana protein match is: transmembrane
receptors (TAIR:AT2G32140.1); Has 41 Blast hits to 41
proteins in 17 species: Archae - 0; Bacteria - 2; Metazoa -
23; Fungi - 0; Plants - 11; Viruses - 0; Other Eukaryotes -
5 (source: NCBI BLink).		 -0.72 0.31 -0.3
26 AT3G01040 galacturonosyltransferase 13 galacturonosyltransferase 13 0.72 0.29 -0.35
27 AT3G59350 Protein kinase superfamily protein 0.72 0.31 -0.3
28 AT3G23080 Polyketide cyclase/dehydrase and lipid transport
superfamily protein		 -0.72 0.32 -0.32
29 AT3G47430 peroxin 11B peroxin 11B -0.72 0.31 -0.31
30 AT1G66580 senescence associated gene 24 ribosomal protein L10 C,
senescence associated gene 24		 0.72 0.33 -0.31
31 AT1G15860 Domain of unknown function (DUF298) 0.72 0.31 -0.31
32 AT3G09350 Fes1A Fes1A 0.72 0.3 -0.3
33 AT4G21480 sugar transporter protein 12 sugar transporter protein 12 -0.72 0.31 -0.32
34 AT5G42940 RING/U-box superfamily protein 0.72 0.34 -0.35
35 AT1G13260 related to ABI3/VP1 1 ETHYLENE RESPONSE DNA BINDING
FACTOR 4, related to ABI3/VP1 1		 0.71 0.31 -0.33
36 AT4G22730 Leucine-rich repeat protein kinase family protein -0.71 0.33 -0.31
37 AT3G29240 Protein of unknown function (DUF179) -0.71 0.32 -0.3
38 AT5G13730 sigma factor 4 sigma factor 4, SIGD -0.71 0.33 -0.3
39 AT5G25800 Polynucleotidyl transferase, ribonuclease H-like
superfamily protein		 0.71 0.29 -0.32
40 AT3G19720 P-loop containing nucleoside triphosphate hydrolases
superfamily protein		 ACCUMULATION AND REPLICATION OF
CHLOROPLAST 5, Dynamin related
protein 5B		 -0.71 0.32 -0.3
41 AT2G24500 Zinc finger protein 622 FZF 0.71 0.3 -0.31
42 AT4G13750 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
family protein		 EMBRYO DEFECTIVE 2597, NO VEIN 0.71 0.32 -0.33
43 AT4G10060 Beta-glucosidase, GBA2 type family protein -0.71 0.35 -0.32
44 AT5G43130 TBP-associated factor 4 TBP-associated factor 4,
TBP-associated factor 4B		 0.71 0.31 -0.33
45 AT4G33430 BRI1-associated receptor kinase ATBAK1, SOMATIC EMBRYOGENESIS
RECEPTOR-LIKE KINASE 3,
BRI1-associated receptor kinase,
ELONGATED, RECEPTOR KINASES LIKE
SERK 10, SOMATIC EMBRYOGENESIS
RECEPTOR-LIKE KINASE 3		 0.7 0.32 -0.33
46 AT3G15940 UDP-Glycosyltransferase superfamily protein -0.7 0.3 -0.31
47 AT2G46520 cellular apoptosis susceptibility protein, putative /
importin-alpha re-exporter, putative		 0.7 0.3 -0.32
48 AT2G46220 Uncharacterized conserved protein (DUF2358) -0.7 0.33 -0.32
49 AT1G49180 protein kinase family protein -0.7 0.33 -0.32
50 AT5G19690 staurosporin and temperature sensitive 3-like A staurosporin and temperature
sensitive 3-like A		 0.7 0.3 -0.33
51 AT3G07310 Protein of unknown function (DUF760) -0.7 0.34 -0.32
52 AT5G66490 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN: plasma
membrane; EXPRESSED IN: 17 plant structures; EXPRESSED
DURING: 9 growth stages; BEST Arabidopsis thaliana protein
match is: unknown protein (TAIR:AT3G50900.1); Has 1807
Blast hits to 1807 proteins in 277 species: Archae - 0;
Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385;
Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).		 -0.7 0.3 -0.32
53 AT5G04840 bZIP protein 0.7 0.32 -0.3
54 AT5G12900 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
chloroplast; EXPRESSED IN: 21 plant structures; EXPRESSED
DURING: 13 growth stages; BEST Arabidopsis thaliana protein
match is: unknown protein (TAIR:AT1G12330.1); Has 1807
Blast hits to 1807 proteins in 277 species: Archae - 0;
Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385;
Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).		 -0.7 0.33 -0.34
55 AT1G08030 tyrosylprotein sulfotransferase active quiescent center1,
tyrosylprotein sulfotransferase		 0.7 0.32 -0.3
56 AT5G09420 translocon at the outer membrane of chloroplasts 64-V AtmtOM64, translocon at the outer
membrane of chloroplasts 64-V,
ARABIDOPSIS THALIANA TRANSLOCON AT
THE OUTER MEMBRANE OF CHLOROPLASTS
64-V, outer membrane 64,
translocon at the outer membrane
of chloroplasts 64-V		 0.7 0.31 -0.34
57 AT1G10360 glutathione S-transferase TAU 18 glutathione S-transferase TAU 18,
GLUTATHIONE S-TRANSFERASE 29,
glutathione S-transferase TAU 18		 -0.7 0.31 -0.33
58 AT1G66130 NAD(P)-binding Rossmann-fold superfamily protein -0.7 0.33 -0.3
59 AT1G22020 serine hydroxymethyltransferase 6 serine hydroxymethyltransferase 6 0.7 0.31 -0.31
60 AT2G19450 membrane bound O-acyl transferase (MBOAT) family protein ABX45, AS11, Arabidopsis thaliana
acyl-CoA:diacylglycerol
acyltransferase,
acyl-CoA:diacylglycerol
acyltransferase 1, RDS1,
TRIACYLGLYCEROL BIOSYNTHESIS
DEFECT 1		 0.69 0.31 -0.3
61 AT3G48250 Pentatricopeptide repeat (PPR) superfamily protein Buthionine sulfoximine-insensitive
roots 6		 0.69 0.31 -0.33
62 AT4G02610 Aldolase-type TIM barrel family protein -0.69 0.3 -0.33
63 AT5G27540 MIRO-related GTP-ase 1 embryo defective 2473,
MIRO-related GTP-ase 1		 0.69 0.34 -0.27
64 AT3G26280 cytochrome P450, family 71, subfamily B, polypeptide 4 cytochrome P450, family 71,
subfamily B, polypeptide 4		 -0.69 0.32 -0.32
65 AT1G02460 Pectin lyase-like superfamily protein 0.69 0.32 -0.33
66 AT5G54580 RNA-binding (RRM/RBD/RNP motifs) family protein 0.69 0.32 -0.34
67 AT1G11390 Protein kinase superfamily protein 0.69 0.31 -0.32
68 AT3G46540 ENTH/VHS family protein -0.69 0.3 -0.34
69 AT5G53440 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
cytosol; EXPRESSED IN: 25 plant structures; EXPRESSED
DURING: 15 growth stages; Has 1807 Blast hits to 1807
proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa
- 736; Fungi - 347; Plants - 385; Viruses - 0; Other
Eukaryotes - 339 (source: NCBI BLink).		 0.69 0.31 -0.33
70 AT1G53200 unknown protein; Has 21 Blast hits to 21 proteins in 9
species: Archae - 0; Bacteria - 2; Metazoa - 0; Fungi - 0;
Plants - 19; Viruses - 0; Other Eukaryotes - 0 (source:
NCBI BLink).		 0.69 0.31 -0.32
71 AT1G26560 beta glucosidase 40 beta glucosidase 40 -0.69 0.3 -0.32
72 AT1G17840 white-brown complex homolog protein 11 ATP-binding cassette G11,
AtABCG11, ARABIDOPSIS THALIANA
WHITE-BROWN COMPLEX HOMOLOG
PROTEIN 11, CUTICULAR DEFECT AND
ORGAN FUSION 1, DESPERADO,
white-brown complex homolog
protein 11		 -0.68 0.32 -0.31
73 AT3G19590 Transducin/WD40 repeat-like superfamily protein BUB (BUDDING UNINHIBITED BY
BENZYMIDAZOL) 3.1		 -0.68 0.3 -0.3
74 AT1G74750 Pentatricopeptide repeat (PPR) superfamily protein 0.68 0.32 -0.3
75 AT1G53070 Legume lectin family protein -0.68 0.3 -0.32
76 AT1G71210 Pentatricopeptide repeat (PPR) superfamily protein 0.68 0.3 -0.32
77 AT1G03400 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase
superfamily protein		 -0.68 0.3 -0.31
78 AT4G26070 MAP kinase/ ERK kinase 1 ATMEK1, MAP kinase/ ERK kinase 1,
MITOGEN ACTIVATED PROTEIN KINASE
KINASE 1, NMAPKK		 -0.68 0.32 -0.32
79 AT5G18210 NAD(P)-binding Rossmann-fold superfamily protein -0.68 0.31 -0.32
80 AT3G43300 HOPM interactor 7 HOPM interactor 7, BFA-VISUALIZED
ENDOCYTIC TRAFFICKING DEFECTIVE1		 0.68 0.32 -0.33
81 AT3G11450 DnaJ domain ;Myb-like DNA-binding domain 0.68 0.35 -0.32
82 AT5G52420 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
endoplasmic reticulum; EXPRESSED IN: 24 plant structures;
EXPRESSED DURING: 13 growth stages; BEST Arabidopsis
thaliana protein match is: unknown protein
(TAIR:AT5G23920.1); Has 30201 Blast hits to 17322 proteins
in 780 species: Archae - 12; Bacteria - 1396; Metazoa -
17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other
Eukaryotes - 2996 (source: NCBI BLink).		 -0.68 0.3 -0.31
83 AT1G73680 alpha dioxygenase alpha dioxygenase -0.68 0.32 -0.32
84 AT3G25585 aminoalcoholphosphotransferase aminoalcoholphosphotransferase,
ATAAPT2		 0.67 0.33 -0.34
85 AT1G48420 D-cysteine desulfhydrase 1-AMINOCYCLOPROPANE-1-CARBOXYLIC
ACID DEAMINASE 1, A. THALIANA
1-AMINOCYCLOPROPANE-1-CARBOXYLIC
ACID DEAMINASE 1, D-cysteine
desulfhydrase, D-cysteine
desulfhydrase		 -0.67 0.31 -0.35
86 AT3G19000 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase
superfamily protein		 -0.67 0.32 -0.33
87 AT5G24930 CONSTANS-like 4 ATCOL4, CONSTANS-like 4 -0.67 0.32 -0.3
88 AT2G44060 Late embryogenesis abundant protein, group 2 -0.67 0.32 -0.33
89 AT2G21970 stress enhanced protein 2 stress enhanced protein 2 -0.67 0.33 -0.31
90 AT3G19800 Protein of unknown function (DUF177) -0.67 0.31 -0.31
91 AT5G58130 RNA-binding (RRM/RBD/RNP motifs) family protein REPRESSOR OF SILENCING 3 0.67 0.33 -0.31
92 AT3G07410 RAB GTPase homolog A5B RAB GTPase homolog A5B, RAB GTPase
homolog A5B		 -0.67 0.33 -0.3
93 AT4G35550 WUSCHEL related homeobox 13 ATWOX13, HB-4, WUSCHEL related
homeobox 13		 -0.67 0.32 -0.32
94 AT3G42725 Putative membrane lipoprotein -0.67 0.33 -0.33
95 AT2G41630 transcription factor IIB transcription factor IIB 0.67 0.32 -0.32
96 AT1G33230 TMPIT-like protein 0.67 0.34 -0.31
97 AT5G54660 HSP20-like chaperones superfamily protein -0.67 0.34 -0.31
98 AT2G32250 FAR1-related sequence 2 FAR1-related sequence 2 0.67 0.32 -0.31
99 AT4G03150 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
chloroplast; EXPRESSED IN: 20 plant structures; EXPRESSED
DURING: 13 growth stages; Has 30201 Blast hits to 17322
proteins in 780 species: Archae - 12; Bacteria - 1396;
Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0;
Other Eukaryotes - 2996 (source: NCBI BLink).		 -0.67 0.32 -0.33
100 AT3G12560 TRF-like 9 TELOMERIC DNA-BINDING PROTEIN 2,
TRF-like 9		 -0.67 0.32 -0.31
101 AT1G72030 Acyl-CoA N-acyltransferases (NAT) superfamily protein -0.67 0.33 -0.3
102 AT2G21185 unknown protein; Has 9 Blast hits to 9 proteins in 4
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 9; Viruses - 0; Other Eukaryotes - 0 (source: NCBI
BLink).		 -0.66 0.31 -0.32
103 AT3G01150 polypyrimidine tract-binding protein 1 POLYPYRIMIDINE TRACT-BINDING
PROTEIN 1, polypyrimidine
tract-binding protein 1		 0.66 0.3 -0.31
104 AT3G10380 subunit of exocyst complex 8 SUBUNIT OF EXOCYST COMPLEX 8,
subunit of exocyst complex 8		 0.66 0.32 -0.32
105 AT5G25630 Tetratricopeptide repeat (TPR)-like superfamily protein -0.66 0.29 -0.31
106 AT1G68220 Protein of unknown function (DUF1218) -0.66 0.31 -0.33
107 AT2G16950 transportin 1 TRANSPORTIN 1, transportin 1 0.66 0.33 -0.29
108 AT3G28130 nodulin MtN21 /EamA-like transporter family protein -0.66 0.33 -0.3
109 AT1G68660 Ribosomal protein L12/ ATP-dependent Clp protease adaptor
protein ClpS family protein		 -0.66 0.31 -0.33
110 AT1G01170 Protein of unknown function (DUF1138) -0.66 0.32 -0.29
111 AT1G51360 dimeric A/B barrel domainS-protein 1 DIMERIC A/B BARREL DOMAINS-PROTEIN
1, dimeric A/B barrel
domainS-protein 1		 -0.66 0.32 -0.32
112 AT1G06780 galacturonosyltransferase 6 galacturonosyltransferase 6 0.65 0.31 -0.32
113 AT2G38540 lipid transfer protein 1 ARABIDOPSIS THALIANA LIPID
TRANSFER PROTEIN 1, lipid transfer
protein 1, LIPID TRANSFER PROTEIN
1		 -0.65 0.31 -0.3
114 AT4G04860 DERLIN-2.2 DERLIN-2.2 0.65 0.31 -0.31
115 AT2G03310 unknown protein; Has 17 Blast hits to 17 proteins in 6
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 17; Viruses - 0; Other Eukaryotes - 0 (source:
NCBI BLink).		 -0.65 0.33 -0.32
116 AT2G42390 protein kinase C substrate, heavy chain-related -0.65 0.33 -0.29
117 AT1G68530 3-ketoacyl-CoA synthase 6 ECERIFERUM 6, CUTICULAR 1, G2,
3-ketoacyl-CoA synthase 6,
POLLEN-PISTIL INCOMPATIBILITY 1		 -0.65 0.32 -0.34
118 AT5G11780 unknown protein; Has 37 Blast hits to 37 proteins in 12
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 3;
Plants - 34; Viruses - 0; Other Eukaryotes - 0 (source:
NCBI BLink).		 -0.65 0.3 -0.31
119 AT5G22460 alpha/beta-Hydrolases superfamily protein -0.65 0.29 -0.3
120 AT2G24762 glutamine dumper 4 glutamine dumper 4, glutamine
dumper 4		 -0.65 0.3 -0.3
121 AT4G37300 maternal effect embryo arrest 59 maternal effect embryo arrest 59 -0.65 0.31 -0.32
122 AT3G56400 WRKY DNA-binding protein 70 ARABIDOPSIS THALIANA WRKY
DNA-BINDING PROTEIN 70, WRKY
DNA-binding protein 70		 -0.65 0.32 -0.33
123 AT4G27710 cytochrome P450, family 709, subfamily B, polypeptide 3 cytochrome P450, family 709,
subfamily B, polypeptide 3		 -0.65 0.34 -0.29
124 AT2G02560 cullin-associated and neddylation dissociated CULLIN-ASSOCIATED AND NEDDYLATION
DISSOCIATED 1, cullin-associated
and neddylation dissociated, ETA2,
HEMIVENATA, TIP120		 0.65 0.31 -0.32
125 AT2G03550 alpha/beta-Hydrolases superfamily protein -0.65 0.32 -0.32
126 AT4G13150 unknown protein; Has 83 Blast hits to 82 proteins in 37
species: Archae - 0; Bacteria - 51; Metazoa - 0; Fungi - 0;
Plants - 30; Viruses - 0; Other Eukaryotes - 2 (source:
NCBI BLink).		 -0.65 0.3 -0.31
127 AT5G33280 Voltage-gated chloride channel family protein -0.65 0.32 -0.32
128 AT3G12680 floral homeotic protein (HUA1) ENHANCER OF AG-4 1 0.65 0.32 -0.32
129 AT2G44300 Bifunctional inhibitor/lipid-transfer protein/seed storage
2S albumin superfamily protein		 -0.65 0.34 -0.31
130 AT5G38560 Protein kinase superfamily protein proline-rich extensin-like
receptor kinase 8, proline-rich
extensin-like receptor kinase 8		 0.65 0.31 -0.28
131 ATMG00690 hypothetical protein ORF240A 0.65 0.32 -0.3
132 AT1G67750 Pectate lyase family protein -0.65 0.31 -0.3
133 AT5G13390 no exine formation 1 NO EXINE FORMATION 1 0.64 0.32 -0.32
134 AT4G20300 Protein of unknown function (DUF1639) 0.64 0.31 -0.3
135 AT2G16920 ubiquitin-conjugating enzyme 23 PHO2 FAMILY UBIQUITIN CONJUGATION
ENZYME 2, ubiquitin-conjugating
enzyme 23		 0.64 0.33 -0.3
Metabolite information
Help   
  CID Metabolite name Pathway Information Correlation link
Compound name Stereochemistry Aracyc name pcc 2.5% 97.5% PPI
136 C0038 5-(Methylthio)pentylglucosinolate - 5-Methylthiopentylglucosinolate glucosinolate biosynthesis from trihomomethionine -0.72 0.46 -0.47 C0038
137 C0033 4-(Methylsulfinyl)butylglucosinolate - 4-Methylsulfinylbutyl glucosinolate glucosinolate biosynthesis from dihomomethionine -0.69 0.44 -0.46 C0033
138 C0183 MST_3033.1 - - - -0.66 0.47 -0.49