AGICode | AT4G11740 |
Description | Ubiquitin-like superfamily protein |
Gene Code | Description / Information | Gene name | Correlation | link | ||||
---|---|---|---|---|---|---|---|---|
pcc | 2.5% | 97.5% | PPI | |||||
1 | AT4G11740 | Ubiquitin-like superfamily protein | SAY1 | 1 | 0.33 | -0.32 | ||
2 | AT5G20910 | RING/U-box superfamily protein | ABI3-interacting protein 2 | 0.82 | 0.31 | -0.34 | ||
3 | AT3G51660 | Tautomerase/MIF superfamily protein | 0.81 | 0.31 | -0.29 | |||
4 | AT4G15470 | Bax inhibitor-1 family protein | 0.79 | 0.3 | -0.32 | |||
5 | AT3G53230 | ATPase, AAA-type, CDC48 protein | 0.79 | 0.34 | -0.3 | |||
6 | AT3G07580 | unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 18 plant structures; EXPRESSED DURING: 12 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G48335.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). |
-0.79 | 0.32 | -0.34 | |||
7 | AT2G04790 | unknown protein; Has 45 Blast hits to 45 proteins in 15 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 43; Viruses - 0; Other Eukaryotes - 2 (source: NCBI BLink). |
-0.79 | 0.31 | -0.3 | |||
8 | AT3G17410 | Protein kinase superfamily protein | 0.79 | 0.31 | -0.31 | |||
9 | AT2G17760 | Eukaryotic aspartyl protease family protein | 0.79 | 0.31 | -0.33 | |||
10 | AT1G34220 | Regulator of Vps4 activity in the MVB pathway protein | 0.78 | 0.31 | -0.33 | |||
11 | AT3G26020 | Protein phosphatase 2A regulatory B subunit family protein | 0.78 | 0.29 | -0.33 | |||
12 | AT4G02610 | Aldolase-type TIM barrel family protein | -0.77 | 0.3 | -0.33 | |||
13 | AT5G01800 | saposin B domain-containing protein | 0.77 | 0.31 | -0.33 | |||
14 | AT3G07720 | Galactose oxidase/kelch repeat superfamily protein | 0.77 | 0.31 | -0.31 | |||
15 | AT1G21380 | Target of Myb protein 1 | 0.76 | 0.3 | -0.29 | |||
16 | AT4G14580 | CBL-interacting protein kinase 4 | CBL-interacting protein kinase 4, SNF1-RELATED PROTEIN KINASE 3.3 |
0.76 | 0.31 | -0.3 | ||
17 | AT1G31280 | Argonaute family protein | argonaute 2 | 0.76 | 0.34 | -0.34 | ||
18 | AT3G08710 | thioredoxin H-type 9 | thioredoxin H-type 9, thioredoxin H-type 9, THIOREDOXIN TYPE H 9 |
0.76 | 0.32 | -0.31 | ||
19 | AT1G22070 | TGA1A-related gene 3 | TGA1A-related gene 3 | 0.75 | 0.3 | -0.32 | ||
20 | AT1G06780 | galacturonosyltransferase 6 | galacturonosyltransferase 6 | 0.75 | 0.32 | -0.31 | ||
21 | AT1G66880 | Protein kinase superfamily protein | 0.75 | 0.3 | -0.32 | |||
22 | AT1G74180 | receptor like protein 14 | receptor like protein 14, receptor like protein 14 |
-0.75 | 0.31 | -0.3 | ||
23 | AT1G23780 | F-box family protein | 0.75 | 0.3 | -0.32 | |||
24 | AT1G22770 | gigantea protein (GI) | FB, GIGANTEA | 0.75 | 0.33 | -0.3 | ||
25 | AT1G78600 | light-regulated zinc finger protein 1 | B-box domain protein 22, DOUBLE B-BOX 3, light-regulated zinc finger protein 1, SALT TOLERANCE HOMOLOG 3 |
0.75 | 0.32 | -0.33 | ||
26 | AT3G47430 | peroxin 11B | peroxin 11B | -0.75 | 0.3 | -0.33 | ||
27 | AT3G51420 | strictosidine synthase-like 4 | STRICTOSIDINE SYNTHASE-LIKE 4, strictosidine synthase-like 4 |
-0.75 | 0.32 | -0.31 | ||
28 | AT1G07310 | Calcium-dependent lipid-binding (CaLB domain) family protein |
0.74 | 0.32 | -0.33 | |||
29 | AT4G24810 | Protein kinase superfamily protein | -0.74 | 0.32 | -0.3 | |||
30 | AT5G52580 | RabGAP/TBC domain-containing protein | 0.74 | 0.33 | -0.3 | |||
31 | AT5G55470 | Na+/H+ (sodium hydrogen) exchanger 3 | ARABIDOPSIS THALIANA NA+/H+ (SODIUM HYDROGEN) EXCHANGER 3, Na+/H+ (sodium hydrogen) exchanger 3 |
-0.74 | 0.32 | -0.33 | ||
32 | AT1G64720 | Polyketide cyclase/dehydrase and lipid transport superfamily protein |
CP5 | -0.74 | 0.32 | -0.32 | ||
33 | AT5G06830 | unknown protein; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF773 (InterPro:IPR008491); Has 365 Blast hits to 359 proteins in 109 species: Archae - 9; Bacteria - 13; Metazoa - 209; Fungi - 7; Plants - 47; Viruses - 0; Other Eukaryotes - 80 (source: NCBI BLink). |
0.74 | 0.33 | -0.3 | |||
34 | AT3G46290 | hercules receptor kinase 1 | hercules receptor kinase 1 | 0.74 | 0.33 | -0.31 | ||
35 | AT1G47710 | Serine protease inhibitor (SERPIN) family protein | 0.74 | 0.31 | -0.33 | |||
36 | AT1G75440 | ubiquitin-conjugating enzyme 16 | ubiquitin-conjugating enzyme 16 | 0.74 | 0.3 | -0.3 | ||
37 | AT2G29070 | Ubiquitin fusion degradation UFD1 family protein | 0.73 | 0.32 | -0.3 | |||
38 | AT3G48360 | BTB and TAZ domain protein 2 | ATBT2, BTB and TAZ domain protein 2 |
-0.73 | 0.31 | -0.29 | ||
39 | AT3G12210 | DNA binding | -0.73 | 0.32 | -0.32 | |||
40 | AT4G03400 | Auxin-responsive GH3 family protein | DWARF IN LIGHT 2, GH3-10 | 0.73 | 0.31 | -0.32 | ||
41 | AT1G43890 | RAB GTPASE HOMOLOG B18 | ARABIDOPSIS RAB GTPASE HOMOLOG C1, ARABIDOPSIS RAB GTPASE HOMOLOG B18, ARABIDOPSIS RAB GTPASE HOMOLOG C1, RAB GTPASE HOMOLOG B18, RAB GTPASE HOMOLOG 18-1, RAB GTPASE HOMOLOG C1 |
0.73 | 0.3 | -0.3 | ||
42 | AT2G24150 | heptahelical protein 3 | heptahelical protein 3 | -0.73 | 0.31 | -0.32 | ||
43 | AT2G17980 | Sec1/munc18-like (SM) proteins superfamily | ATSLY1 | 0.73 | 0.32 | -0.31 | ||
44 | AT5G13530 | protein kinases;ubiquitin-protein ligases | KEEP ON GOING | 0.73 | 0.29 | -0.34 | ||
45 | AT5G63120 | P-loop containing nucleoside triphosphate hydrolases superfamily protein |
0.73 | 0.31 | -0.34 | |||
46 | AT3G06410 | Zinc finger C-x8-C-x5-C-x3-H type family protein | 0.73 | 0.32 | -0.34 | |||
47 | AT1G33970 | P-loop containing nucleoside triphosphate hydrolases superfamily protein |
0.72 | 0.3 | -0.31 | |||
48 | AT4G11890 | Protein kinase superfamily protein | 0.72 | 0.32 | -0.31 | |||
49 | AT5G48540 | receptor-like protein kinase-related family protein | 0.72 | 0.32 | -0.32 | |||
50 | AT5G15170 | tyrosyl-DNA phosphodiesterase-related | tyrosyl-DNA phosphodiesterase 1 | -0.72 | 0.31 | -0.31 | ||
51 | AT4G14230 | CBS domain-containing protein with a domain of unknown function (DUF21) |
0.72 | 0.3 | -0.3 | |||
52 | AT4G27370 | P-loop containing nucleoside triphosphate hydrolases superfamily protein |
MYOSIN VIII B, VIIIB | -0.72 | 0.31 | -0.32 | ||
53 | AT1G10940 | Protein kinase superfamily protein | ARABIDOPSIS SERINE/THREONINE KINASE 1, SUCROSE NONFERMENTING 1-RELATED PROTEIN KINASE 2-4, SNF1-related protein kinase 2.4, SRK2A |
0.72 | 0.32 | -0.31 | ||
54 | AT2G32970 | unknown protein; Has 158 Blast hits to 154 proteins in 73 species: Archae - 0; Bacteria - 61; Metazoa - 0; Fungi - 0; Plants - 55; Viruses - 28; Other Eukaryotes - 14 (source: NCBI BLink). |
-0.72 | 0.3 | -0.32 | |||
55 | AT2G31190 | Protein of unknown function, DUF647 | ROOT UV-B SENSITIVE 2, weak auxin response1 |
-0.71 | 0.31 | -0.33 | ||
56 | AT3G53190 | Pectin lyase-like superfamily protein | -0.71 | 0.31 | -0.31 | |||
57 | AT2G29300 | NAD(P)-binding Rossmann-fold superfamily protein | -0.71 | 0.32 | -0.3 | |||
58 | AT5G65720 | nitrogen fixation S (NIFS)-like 1 | ARABIDOPSIS THALIANA NITROGEN FIXATION S (NIFS)-LIKE 1, NITROGEN FIXATION S HOMOLOG 1, nitrogen fixation S (NIFS)-like 1, NITROGEN FIXATION S HOMOLOG 1 |
0.71 | 0.31 | -0.32 | ||
59 | AT1G16070 | tubby like protein 8 | tubby like protein 8, tubby like protein 8 |
-0.71 | 0.3 | -0.33 | ||
60 | AT1G77460 | Armadillo/beta-catenin-like repeat ; C2 calcium/lipid-binding domain (CaLB) protein |
-0.71 | 0.31 | -0.34 | |||
61 | AT1G72390 | CONTAINS InterPro DOMAIN/s: Spt20 family (InterPro:IPR021950); Has 8778 Blast hits to 7244 proteins in 477 species: Archae - 6; Bacteria - 326; Metazoa - 4198; Fungi - 1506; Plants - 923; Viruses - 22; Other Eukaryotes - 1797 (source: NCBI BLink). |
0.71 | 0.32 | -0.33 | |||
62 | AT2G18730 | diacylglycerol kinase 3 | ATDGK3, diacylglycerol kinase 3 | 0.71 | 0.33 | -0.33 | ||
63 | AT3G07410 | RAB GTPase homolog A5B | RAB GTPase homolog A5B, RAB GTPase homolog A5B |
-0.71 | 0.31 | -0.28 | ||
64 | AT1G10360 | glutathione S-transferase TAU 18 | glutathione S-transferase TAU 18, GLUTATHIONE S-TRANSFERASE 29, glutathione S-transferase TAU 18 |
-0.71 | 0.31 | -0.33 | ||
65 | AT1G61140 | SNF2 domain-containing protein / helicase domain-containing protein / zinc finger protein-related |
embryo sac development arrest 16 | 0.71 | 0.32 | -0.31 | ||
66 | AT1G31730 | Adaptin family protein | 0.7 | 0.29 | -0.32 | |||
67 | AT4G30690 | Translation initiation factor 3 protein | -0.7 | 0.32 | -0.3 | |||
68 | AT5G03520 | RAB GTPase homolog 8C | ARABIDOPSIS RAB HOMOLOG E1D, RAB GTPase homolog 8C, ATRABE1D, RAB HOMOLOG E1D, RAB GTPase homolog 8C |
0.7 | 0.32 | -0.29 | ||
69 | AT4G32240 | unknown protein; Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). |
-0.7 | 0.31 | -0.31 | |||
70 | AT1G28200 | FH interacting protein 1 | FH interacting protein 1 | 0.7 | 0.3 | -0.32 | ||
71 | AT4G10060 | Beta-glucosidase, GBA2 type family protein | -0.7 | 0.32 | -0.32 | |||
72 | AT1G59710 | Protein of unknown function (DUF569) | 0.7 | 0.31 | -0.3 | |||
73 | AT5G54660 | HSP20-like chaperones superfamily protein | -0.7 | 0.32 | -0.29 | |||
74 | AT5G52200 | phosphoprotein phosphatase inhibitors | AtI-2, inhibitor-2 | 0.7 | 0.3 | -0.33 | ||
75 | AT5G01960 | RING/U-box superfamily protein | 0.7 | 0.3 | -0.36 | |||
76 | AT1G37130 | nitrate reductase 2 | ARABIDOPSIS NITRATE REDUCTASE 2, B29, CHLORATE RESISTANT 3, nitrate reductase 2, NIA2-1, NITRATE REDUCTASE, NITRATE REDUCTASE 2 |
-0.69 | 0.32 | -0.32 | ||
77 | AT3G58975 | pseudogene of F-box family protein | -0.69 | 0.32 | -0.32 | |||
78 | AT3G25980 | DNA-binding HORMA family protein | MITOTIC ARREST-DEFICIENT 2 | -0.69 | 0.32 | -0.33 | ||
79 | AT5G47900 | Protein of unknown function (DUF1624) | -0.69 | 0.32 | -0.29 | |||
80 | AT1G62520 | unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT4G12450.1); Has 388 Blast hits to 388 proteins in 26 species: Archae - 0; Bacteria - 1; Metazoa - 0; Fungi - 8; Plants - 376; Viruses - 0; Other Eukaryotes - 3 (source: NCBI BLink). |
-0.69 | 0.32 | -0.31 | |||
81 | AT1G30550 | S-adenosyl-L-methionine-dependent methyltransferases superfamily protein |
-0.69 | 0.3 | -0.31 | |||
82 | AT4G33660 | unknown protein; Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). |
-0.69 | 0.3 | -0.32 | |||
83 | AT1G76970 | Target of Myb protein 1 | 0.69 | 0.31 | -0.31 | |||
84 | AT4G33666 | unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 19 plant structures; EXPRESSED DURING: 11 growth stages; Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). |
-0.69 | 0.3 | -0.32 | |||
85 | AT3G55630 | DHFS-FPGS homolog D | DHFS-FPGS homolog D, DHFS-FPGS homolog D, folylpolyglutamate synthetase 3 |
-0.69 | 0.32 | -0.32 | ||
86 | AT3G47560 | alpha/beta-Hydrolases superfamily protein | -0.69 | 0.31 | -0.34 | |||
87 | AT2G33700 | Protein phosphatase 2C family protein | 0.69 | 0.32 | -0.31 | |||
88 | AT5G41940 | Ypt/Rab-GAP domain of gyp1p superfamily protein | 0.68 | 0.3 | -0.32 | |||
89 | AT2G27200 | P-loop containing nucleoside triphosphate hydrolases superfamily protein |
0.68 | 0.32 | -0.33 | |||
90 | AT1G15570 | CYCLIN A2;3 | CYCLIN A2;3 | -0.68 | 0.32 | -0.32 | ||
91 | AT1G04590 | BEST Arabidopsis thaliana protein match is: Pentatricopeptide repeat (PPR) superfamily protein (TAIR:AT4G21190.1); Has 111 Blast hits to 111 proteins in 15 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 109; Viruses - 0; Other Eukaryotes - 2 (source: NCBI BLink). |
-0.68 | 0.31 | -0.3 | |||
92 | AT1G10390 | Nucleoporin autopeptidase | 0.68 | 0.31 | -0.32 | |||
93 | AT2G48030 | DNAse I-like superfamily protein | 0.68 | 0.32 | -0.3 | |||
94 | AT1G23050 | hydroxyproline-rich glycoprotein family protein | -0.68 | 0.32 | -0.3 | |||
95 | AT5G24460 | unknown protein; INVOLVED IN: biological_process unknown; LOCATED IN: cell wall; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). |
0.68 | 0.3 | -0.33 | |||
96 | AT4G30993 | Calcineurin-like metallo-phosphoesterase superfamily protein |
-0.68 | 0.31 | -0.33 | |||
97 | AT3G19840 | pre-mRNA-processing protein 40C | pre-mRNA-processing protein 40C, pre-mRNA-processing protein 40C |
0.68 | 0.3 | -0.31 | ||
98 | AT2G39760 | BTB/POZ/MATH-domains containing protein | ATBPM3, BPM3 | 0.68 | 0.31 | -0.31 | ||
99 | AT1G02270 | Calcium-binding endonuclease/exonuclease/phosphatase family | 0.68 | 0.33 | -0.31 | |||
100 | AT5G23720 | dual specificity protein phosphatase family protein | PROPYZAMIDE-HYPERSENSITIVE 1 | 0.68 | 0.32 | -0.33 | ||
101 | AT3G15730 | phospholipase D alpha 1 | PLD, phospholipase D alpha 1 | 0.68 | 0.3 | -0.33 | ||
102 | AT1G02050 | Chalcone and stilbene synthase family protein | LESS ADHESIVE POLLEN 6 | -0.67 | 0.29 | -0.32 | ||
103 | AT1G61450 | unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G61415.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). |
-0.67 | 0.35 | -0.33 | |||
104 | AT5G42780 | homeobox protein 27 | homeobox protein 27, homeobox protein 27, ZINC FINGER HOMEODOMAIN 13 |
-0.67 | 0.31 | -0.35 | ||
105 | AT1G49180 | protein kinase family protein | -0.66 | 0.32 | -0.32 | |||
106 | AT1G02180 | ferredoxin-related | -0.66 | 0.31 | -0.32 | |||
107 | AT1G23310 | glutamate:glyoxylate aminotransferase | ALANINE-2-OXOGLUTARATE AMINOTRANSFERASE 1, GLUTAMATE:GLYOXYLATE AMINOTRANSFERASE 1, glutamate:glyoxylate aminotransferase |
-0.66 | 0.33 | -0.34 | ||
108 | AT1G30950 | F-box family protein | UNUSUAL FLORAL ORGANS | -0.66 | 0.32 | -0.3 | ||
109 | AT1G68190 | B-box zinc finger family protein | -0.66 | 0.34 | -0.3 | |||
110 | AT3G58800 | unknown protein; Has 75 Blast hits to 75 proteins in 23 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 53; Viruses - 17; Other Eukaryotes - 5 (source: NCBI BLink). |
-0.66 | 0.34 | -0.33 | |||
111 | AT5G52420 | unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endoplasmic reticulum; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G23920.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). |
-0.66 | 0.34 | -0.31 | |||
112 | AT1G67080 | abscisic acid (aba)-deficient 4 | abscisic acid (ABA)-deficient 4 | -0.65 | 0.31 | -0.31 | ||
113 | AT2G32440 | ent-kaurenoic acid hydroxylase 2 | ARABIDOPSIS ENT-KAURENOIC ACID HYDROXYLASE 2, CYP88A4, ent-kaurenoic acid hydroxylase 2 |
-0.65 | 0.32 | -0.33 | ||
114 | AT3G20790 | NAD(P)-binding Rossmann-fold superfamily protein | -0.65 | 0.31 | -0.3 | |||
115 | AT4G37300 | maternal effect embryo arrest 59 | maternal effect embryo arrest 59 | -0.65 | 0.3 | -0.31 | ||
116 | AT5G49380 | CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF625 (InterPro:IPR006887); BEST Arabidopsis thaliana protein match is: binding (TAIR:AT3G06670.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). |
-0.65 | 0.34 | -0.31 | |||
117 | AT3G19800 | Protein of unknown function (DUF177) | -0.65 | 0.29 | -0.36 | |||
118 | AT4G01330 | Protein kinase superfamily protein | -0.65 | 0.31 | -0.29 | |||
119 | AT3G10140 | RECA homolog 3 | RECA homolog 3 | -0.65 | 0.29 | -0.32 | ||
120 | AT5G15460 | membrane-anchored ubiquitin-fold protein 2 | membrane-anchored ubiquitin-fold protein 2 |
-0.65 | 0.3 | -0.32 |
CID | Metabolite name | Pathway Information | Correlation | link | ||||||
---|---|---|---|---|---|---|---|---|---|---|
Compound name | Stereochemistry | Aracyc name | pcc | 2.5% | 97.5% | PPI | ||||
121 | C0117 | Hydroxyproline | (2S,4R)-Hydroxyproline | 4-Hydroxy-L-proline | protein precursor | 0.68 | 0.46 | -0.46 |