AT4G11200 : -
Query Information
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AGICode AT4G11200
Description transposable element gene
Gene information
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  Gene Code Description / Information Gene name Correlation link
pcc 2.5% 97.5% PPI
1 AT4G11200 transposable element gene 1 0.33 -0.31
2 AT3G04250 F-box associated ubiquitination effector family protein -0.75 0.33 -0.33
3 AT2G05870 transposable element gene -0.66 0.33 -0.35
4 AT5G37490 ARM repeat superfamily protein 0.66 0.32 -0.31
5 AT3G03660 WUSCHEL related homeobox 11 WUSCHEL related homeobox 11 0.64 0.3 -0.31
6 AT3G57140 sugar-dependent 1-like sugar-dependent 1-like 0.63 0.3 -0.31
7 AT1G73220 organic cation/carnitine transporter1 organic cation/carnitine
transporter1, organic
cation/carnitine transporter1		 0.62 0.31 -0.35
8 AT3G56760 Protein kinase superfamily protein -0.62 0.32 -0.34
9 AT3G59000 F-box/RNI-like superfamily protein -0.61 0.3 -0.31
10 AT3G42290 transposable element gene 0.61 0.31 -0.29
11 AT1G45545 Plant protein of unknown function (DUF827) -0.61 0.32 -0.31
12 AT1G04380 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase
superfamily protein		 0.6 0.31 -0.31
13 AT5G58940 calmodulin-binding receptor-like cytoplasmic kinase 1 calmodulin-binding receptor-like
cytoplasmic kinase 1		 0.59 0.3 -0.32
14 AT3G55550 Concanavalin A-like lectin protein kinase family protein 0.59 0.32 -0.31
15 AT5G10440 cyclin d4;2 cyclin d4;2 -0.58 0.29 -0.31
16 AT3G22360 alternative oxidase 1B alternative oxidase 1B 0.58 0.33 -0.33
17 AT3G57050 cystathionine beta-lyase cystathionine beta-lyase -0.58 0.3 -0.32
18 AT5G08130 basic helix-loop-helix (bHLH) DNA-binding superfamily
protein		 BIM1 -0.57 0.31 -0.32
19 AT1G22940 thiamin biosynthesis protein, putative TH-1, THIAMINE REQUIRING 1,
THIAMINEE		 -0.57 0.34 -0.32
20 AT4G08790 Nitrilase/cyanide hydratase and apolipoprotein
N-acyltransferase family protein		 -0.56 0.3 -0.3
21 AT4G11770 Galactose oxidase/kelch repeat superfamily protein -0.56 0.31 -0.31
22 AT2G01800 COP1-interacting protein-related 0.55 0.3 -0.31
23 AT3G20470 glycine-rich protein 5 ATGRP-5, ATGRP5, GLYCINE-RICH
PROTEIN 5, glycine-rich protein 5		 0.55 0.31 -0.31
24 AT2G26620 Pectin lyase-like superfamily protein 0.55 0.3 -0.31
25 AT3G59440 Calcium-binding EF-hand family protein 0.55 0.32 -0.32
26 AT2G14380 transposable element gene 0.54 0.32 -0.32
27 AT2G26150 heat shock transcription factor A2 heat shock transcription factor
A2, heat shock transcription
factor A2		 0.54 0.29 -0.32
28 AT3G21380 Mannose-binding lectin superfamily protein 0.54 0.32 -0.31
29 AT5G01600 ferretin 1 ARABIDOPSIS THALIANA FERRETIN 1,
ferretin 1		 0.54 0.3 -0.32
30 AT4G11745 Galactose oxidase/kelch repeat superfamily protein -0.54 0.33 -0.33
31 AT2G39620 Pentatricopeptide repeat (PPR) superfamily protein -0.54 0.3 -0.28
32 AT5G17080 Cysteine proteinases superfamily protein -0.54 0.31 -0.33
33 AT5G46740 ubiquitin-specific protease 21 ubiquitin-specific protease 21 -0.54 0.34 -0.32
34 AT3G45690 Major facilitator superfamily protein -0.53 0.34 -0.31
35 AT5G38160 Bifunctional inhibitor/lipid-transfer protein/seed storage
2S albumin superfamily protein		 0.53 0.35 -0.32
36 AT4G03780 transposable element gene 0.53 0.29 -0.31
37 AT4G29050 Concanavalin A-like lectin protein kinase family protein 0.53 0.3 -0.32
38 AT1G50080 BEST Arabidopsis thaliana protein match is: RNA-directed
DNA polymerase (reverse transcriptase)-related family
protein (TAIR:AT1G60720.1); Has 42 Blast hits to 42
proteins in 4 species: Archae - 0; Bacteria - 0; Metazoa -
0; Fungi - 0; Plants - 42; Viruses - 0; Other Eukaryotes -
0 (source: NCBI BLink).		 -0.53 0.3 -0.3
39 AT5G37090 transposable element gene -0.53 0.31 -0.3
40 AT4G13760 Pectin lyase-like superfamily protein -0.53 0.33 -0.32
41 AT2G18930 unknown protein; Has 3 Blast hits to 3 proteins in 2
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 3; Viruses - 0; Other Eukaryotes - 0 (source: NCBI
BLink).		 0.52 0.33 -0.3
42 AT1G10870 ARF-GAP domain 4 ARF-GAP domain 4 -0.52 0.33 -0.32
43 AT3G43690 transposable element gene -0.52 0.33 -0.34
44 AT3G24890 vesicle-associated membrane protein 728 ATVAMP728, vesicle-associated
membrane protein 728		 -0.52 0.3 -0.32
45 AT5G64160 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
cellular_component unknown; EXPRESSED IN: 24 plant
structures; EXPRESSED DURING: 15 growth stages; Has 30201
Blast hits to 17322 proteins in 780 species: Archae - 12;
Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants -
5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI
BLink).		 -0.52 0.33 -0.32
46 AT1G73320 S-adenosyl-L-methionine-dependent methyltransferases
superfamily protein		 -0.51 0.34 -0.33
47 AT5G64610 histone acetyltransferase of the MYST family 1 histone acetyltransferase of the
MYST family 1		 -0.51 0.31 -0.32
48 AT1G50310 sugar transporter 9 SUGAR TRANSPORTER 9, sugar
transporter 9		 -0.51 0.3 -0.32
49 AT3G47390 cytidine/deoxycytidylate deaminase family protein PHOTOSENSITIVE 1 -0.51 0.31 -0.3
50 AT3G19350 maternally expressed pab C-terminal maternally expressed pab
C-terminal		 -0.5 0.32 -0.28
51 AT5G45500 RNI-like superfamily protein 0.5 0.32 -0.3
52 AT4G21090 MITOCHONDRIAL FERREDOXIN 2 ARABIDOPSIS MITOCHONDRIAL
FERREDOXIN 2, MITOCHONDRIAL
FERREDOXIN 2		 -0.5 0.31 -0.33
53 AT2G12520 transposable element gene 0.5 0.3 -0.31
54 AT5G18990 Pectin lyase-like superfamily protein -0.5 0.32 -0.33
55 AT1G37140 MEI2 C-terminal RRM only like 1 MEI2 C-terminal RRM only like 1 0.5 0.32 -0.3
56 AT3G26390 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT2G39782.1); Has 16 Blast hits
to 16 proteins in 4 species: Archae - 0; Bacteria - 0;
Metazoa - 0; Fungi - 0; Plants - 16; Viruses - 0; Other
Eukaryotes - 0 (source: NCBI BLink).		 -0.5 0.31 -0.32
57 AT2G26880 AGAMOUS-like 41 AGAMOUS-like 41 -0.5 0.32 -0.33
58 AT4G21060 Galactosyltransferase family protein -0.5 0.33 -0.31
59 AT1G28630 unknown protein; Has 647 Blast hits to 524 proteins in 85
species: Archae - 0; Bacteria - 6; Metazoa - 100; Fungi -
44; Plants - 83; Viruses - 0; Other Eukaryotes - 414
(source: NCBI BLink).		 -0.49 0.32 -0.32
60 AT5G50860 Protein kinase superfamily protein -0.49 0.31 -0.32
61 AT3G12300 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
endomembrane system; EXPRESSED IN: 23 plant structures;
EXPRESSED DURING: 15 growth stages; CONTAINS InterPro
DOMAIN/s: Protein of unknown function DUF667
(InterPro:IPR007714); Has 373 Blast hits to 371 proteins in
116 species: Archae - 0; Bacteria - 0; Metazoa - 213; Fungi
- 4; Plants - 71; Viruses - 0; Other Eukaryotes - 85
(source: NCBI BLink).		 -0.49 0.31 -0.3
62 AT1G07850 Protein of unknown function (DUF604) -0.49 0.3 -0.33
63 AT4G16640 Matrixin family protein -0.49 0.33 -0.32
64 AT5G10680 calmodulin-binding protein-related 0.48 0.31 -0.32
Metabolite information
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  CID Metabolite name Pathway Information Correlation link
Compound name Stereochemistry Aracyc name pcc 2.5% 97.5% PPI
65 C0012 n-Eicosanoic acid - Arachidate fatty acid activation,
fatty acid ω-oxidation,
sporopollenin precursor biosynthesis,
acyl-ACP thioesterase pathway,
ceramide degradation,
fatty acid α-oxidation,
fatty acid ω-oxidation,
phospholipases,
triacylglycerol degradation 		0.69 0.45 -0.46 C0012
66 C0006 β-Homothreonine L-β-Homothreonine - - -0.62 0.43 -0.44
67 C0195 Phenylpyruvic acid - Phenylpyruvate phenylalanine degradation III -0.61 0.43 -0.43 C0195
68 C0027 2-Oxoglutaric acid - α-Ketoglutarate gibberellin biosynthesis III (early C-13 hydroxylation),
leucopelargonidin and leucocyanidin biosynthesis,
aspartate degradation II,
ornithine biosynthesis,
isoleucine biosynthesis I (from threonine),
pantothenate biosynthesis,
phenylalanine degradation III,
flavonol biosynthesis,
lysine biosynthesis VI,
luteolin biosynthesis,
ammonia assimilation cycle II,
serine biosynthesis,
flavonoid biosynthesis,
glutamate biosynthesis V,
aspartate biosynthesis,
glutamate degradation I,
gibberellin inactivation I (2beta-hydroxylation),
alanine degradation III,
photorespiration,
valine biosynthesis,
glycine biosynthesis,
arginine biosynthesis II (acetyl cycle),
arginine degradation I (arginase pathway),
gibberellin biosynthesis II (early C-3 hydroxylation),
leucine biosynthesis,
glutamate biosynthesis IV,
tyrosine biosynthesis II,
proline biosynthesis III,
citrulline biosynthesis,
anthocyanin biosynthesis (pelargonidin 3-O-glucoside, cyanidin 3-O-glucoside),
L-Ndelta-acetylornithine biosynthesis,
isoleucine degradation I,
alanine biosynthesis II,
tyrosine biosynthesis I,
TCA cycle variation III (eukaryotic),
leucine degradation I,
alanine degradation II (to D-lactate),
TCA cycle variation V (plant),
arginine degradation VI (arginase 2 pathway),
valine degradation I,
gibberellin biosynthesis I (non C-3, non C-13 hydroxylation),
1,4-dihydroxy-2-naphthoate biosynthesis II (plants),
2-ketoglutarate dehydrogenase complex,
glutamate degradation IV,
tyrosine degradation I,
anthocyanin biosynthesis (delphinidin 3-O-glucoside),
IAA biosynthesis I,
phenylalanine biosynthesis II,
lysine degradation II,
scopoletin biosynthesis,
4-hydroxyphenylpyruvate biosynthesis,
histidine biosynthesis,
glutamine biosynthesis III,
leucodelphinidin biosynthesis 		-0.57 0.44 -0.43 C0027