AT4G11360 : RING-H2 finger A1B
Query Information
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AGICode AT4G11360
Description RING-H2 finger A1B
Gene information
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  Gene Code Description / Information Gene name Correlation link
pcc 2.5% 97.5% PPI
1 AT4G11360 RING-H2 finger A1B RING-H2 finger A1B 1 0.32 -0.3
2 AT5G39710 Tetratricopeptide repeat (TPR)-like superfamily protein EMBRYO DEFECTIVE 2745 -0.82 0.29 -0.31
3 AT5G64240 metacaspase 3 metacaspase 3, metacaspase 1a,
metacaspase 3, metacaspase 1a		 0.78 0.3 -0.29
4 AT1G76800 Vacuolar iron transporter (VIT) family protein -0.73 0.3 -0.3
5 AT5G07860 HXXXD-type acyl-transferase family protein 0.73 0.3 -0.32
6 AT3G02340 RING/U-box superfamily protein 0.72 0.34 -0.33
7 AT3G57780 BEST Arabidopsis thaliana protein match is: nucleolar
protein gar2-related (TAIR:AT2G42320.2); Has 3163 Blast
hits to 2460 proteins in 357 species: Archae - 16; Bacteria
- 291; Metazoa - 841; Fungi - 335; Plants - 248; Viruses -
72; Other Eukaryotes - 1360 (source: NCBI BLink).		 -0.72 0.32 -0.3
8 AT1G24440 RING/U-box superfamily protein 0.72 0.31 -0.32
9 AT5G02490 Heat shock protein 70 (Hsp 70) family protein AtHsp70-2, Hsp70-2 -0.71 0.3 -0.29
10 AT5G40830 S-adenosyl-L-methionine-dependent methyltransferases
superfamily protein		 -0.7 0.32 -0.33
11 AT2G24550 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT4G31510.1); Has 219 Blast hits
to 219 proteins in 33 species: Archae - 0; Bacteria - 0;
Metazoa - 16; Fungi - 2; Plants - 184; Viruses - 0; Other
Eukaryotes - 17 (source: NCBI BLink).		 0.7 0.33 -0.32
12 AT1G15400 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN: plasma
membrane; EXPRESSED IN: 23 plant structures; EXPRESSED
DURING: 13 growth stages; BEST Arabidopsis thaliana protein
match is: unknown protein (TAIR:AT1G80180.1); Has 82 Blast
hits to 82 proteins in 16 species: Archae - 0; Bacteria -
4; Metazoa - 0; Fungi - 0; Plants - 75; Viruses - 0; Other
Eukaryotes - 3 (source: NCBI BLink).		 0.7 0.31 -0.33
13 AT4G21780 unknown protein; Has 30201 Blast hits to 17322 proteins in
780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338;
Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes
- 2996 (source: NCBI BLink).		 0.7 0.3 -0.32
14 AT4G28200 FUNCTIONS IN: molecular_function unknown; INVOLVED IN: RNA
processing; LOCATED IN: intracellular; EXPRESSED IN: 22
plant structures; EXPRESSED DURING: 13 growth stages;
CONTAINS InterPro DOMAIN/s: RNA-processing protein, HAT
helix (InterPro:IPR003107), U3 small nucleolar
RNA-associated protein 6 (InterPro:IPR013949); Has 492
Blast hits to 480 proteins in 206 species: Archae - 0;
Bacteria - 2; Metazoa - 128; Fungi - 191; Plants - 60;
Viruses - 0; Other Eukaryotes - 111 (source: NCBI BLink).		 -0.7 0.34 -0.32
15 AT5G09880 Splicing factor, CC1-like -0.7 0.31 -0.32
16 AT5G62210 Embryo-specific protein 3, (ATS3) -0.69 0.31 -0.3
17 AT3G02760 Class II aaRS and biotin synthetases superfamily protein -0.69 0.3 -0.32
18 AT3G02250 O-fucosyltransferase family protein -0.69 0.31 -0.29
19 AT2G20290 myosin-like protein XIG MYOSIN XI G, myosin-like protein
XIG		 -0.69 0.31 -0.29
20 AT1G61730 DNA-binding storekeeper protein-related transcriptional
regulator		 -0.69 0.32 -0.32
21 AT2G37560 origin recognition complex second largest subunit 2 ORIGIN RECOGNITION COMPLEX SECOND
LARGEST SUBUNIT 2, origin
recognition complex second largest
subunit 2		 -0.69 0.32 -0.32
22 AT5G19120 Eukaryotic aspartyl protease family protein 0.68 0.3 -0.3
23 AT3G53700 Pentatricopeptide repeat (PPR) superfamily protein maternal effect embryo arrest 40 -0.68 0.32 -0.31
24 AT5G61440 atypical CYS HIS rich thioredoxin 5 atypical CYS HIS rich thioredoxin
5		 0.68 0.31 -0.3
25 AT4G32420 Cyclophilin-like peptidyl-prolyl cis-trans isomerase family
protein		 -0.68 0.31 -0.32
26 AT2G35620 Leucine-rich repeat protein kinase family protein FEI 2 -0.68 0.33 -0.31
27 AT4G20980 Eukaryotic translation initiation factor 3 subunit 7
(eIF-3)		 -0.68 0.32 -0.32
28 AT1G59590 ZCF37 ZCF37 0.68 0.33 -0.31
29 AT2G34690 Glycolipid transfer protein (GLTP) family protein ACCELERATED CELL DEATH 11 0.68 0.31 -0.31
30 AT3G56360 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
chloroplast; EXPRESSED IN: 24 plant structures; EXPRESSED
DURING: 15 growth stages; BEST Arabidopsis thaliana protein
match is: unknown protein (TAIR:AT5G05250.1); Has 45 Blast
hits to 45 proteins in 13 species: Archae - 0; Bacteria -
0; Metazoa - 0; Fungi - 0; Plants - 45; Viruses - 0; Other
Eukaryotes - 0 (source: NCBI BLink).		 0.67 0.35 -0.32
31 AT1G26670 Vesicle transport v-SNARE family protein ATVTI12, VESICAL TRANSPORT V-SNARE
12, VTI1B		 0.67 0.34 -0.32
32 AT5G40480 embryo defective 3012 embryo defective 3012 -0.67 0.33 -0.32
33 AT3G15760 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
endomembrane system; EXPRESSED IN: 22 plant structures;
EXPRESSED DURING: 10 growth stages; BEST Arabidopsis
thaliana protein match is: unknown protein
(TAIR:AT1G52565.1); Has 42 Blast hits to 42 proteins in 10
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 42; Viruses - 0; Other Eukaryotes - 0 (source:
NCBI BLink).		 0.67 0.3 -0.31
34 AT3G04730 indoleacetic acid-induced protein 16 indoleacetic acid-induced protein
16		 0.67 0.31 -0.31
35 AT4G09460 myb domain protein 6 myb domain protein 6, myb domain
protein 6		 0.67 0.31 -0.31
36 AT5G54490 pinoid-binding protein 1 pinoid-binding protein 1 0.67 0.3 -0.32
37 AT1G80180 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN: plasma
membrane; EXPRESSED IN: 21 plant structures; EXPRESSED
DURING: 10 growth stages; BEST Arabidopsis thaliana protein
match is: unknown protein (TAIR:AT1G15400.3); Has 30201
Blast hits to 17322 proteins in 780 species: Archae - 12;
Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants -
5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI
BLink).		 0.67 0.32 -0.32
38 AT3G62290 ADP-ribosylation factor A1E ADP-ribosylation factor A1E,
ADP-ribosylation factor A1E		 0.67 0.34 -0.29
39 AT4G15955 alpha/beta-Hydrolases superfamily protein 0.67 0.31 -0.32
40 AT3G52360 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: response to karrikin; LOCATED IN: endomembrane
system; EXPRESSED IN: 23 plant structures; EXPRESSED
DURING: 14 growth stages; BEST Arabidopsis thaliana protein
match is: unknown protein (TAIR:AT2G35850.1); Has 34 Blast
hits to 34 proteins in 10 species: Archae - 0; Bacteria -
0; Metazoa - 0; Fungi - 0; Plants - 34; Viruses - 0; Other
Eukaryotes - 0 (source: NCBI BLink).		 0.66 0.31 -0.32
41 AT1G22040 Galactose oxidase/kelch repeat superfamily protein 0.66 0.31 -0.31
42 AT5G17790 zinc finger (Ran-binding) family protein VARIEGATED 3 -0.66 0.32 -0.33
43 AT3G61770 Acid phosphatase/vanadium-dependent haloperoxidase-related
protein		 -0.66 0.33 -0.34
44 AT4G38470 ACT-like protein tyrosine kinase family protein serine/threonine/tyrosine kinase
46		 0.66 0.3 -0.31
45 AT1G17340 Phosphoinositide phosphatase family protein 0.66 0.3 -0.31
46 AT5G24890 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
cellular_component unknown; EXPRESSED IN: 24 plant
structures; EXPRESSED DURING: 13 growth stages; BEST
Arabidopsis thaliana protein match is: unknown protein
(TAIR:AT2G24550.1); Has 1807 Blast hits to 1807 proteins in
277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi
- 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339
(source: NCBI BLink).		 0.65 0.31 -0.33
47 AT4G17486 PPPDE putative thiol peptidase family protein 0.65 0.33 -0.29
48 AT3G61760 DYNAMIN-like 1B DYNAMIN-like 1B, DYNAMIN-like 1B -0.65 0.28 -0.31
49 AT5G06000 eukaryotic translation initiation factor 3G2 ARABIDOPSIS THALIANA EUKARYOTIC
TRANSLATION INITIATION FACTOR 3G2,
eukaryotic translation initiation
factor 3G2		 -0.65 0.31 -0.3
50 AT1G10150 Carbohydrate-binding protein 0.65 0.3 -0.32
51 AT3G21260 Glycolipid transfer protein (GLTP) family protein GLYCOLIPID TRANSFER PROTEIN 3 0.65 0.31 -0.31
52 AT4G39960 Molecular chaperone Hsp40/DnaJ family protein -0.65 0.31 -0.32
53 AT5G17440 LUC7 related protein -0.65 0.32 -0.33
54 AT5G08240 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT5G23160.1); Has 69 Blast hits
to 69 proteins in 10 species: Archae - 0; Bacteria - 1;
Metazoa - 0; Fungi - 0; Plants - 68; Viruses - 0; Other
Eukaryotes - 0 (source: NCBI BLink).		 0.65 0.32 -0.3
55 AT5G15410 Cyclic nucleotide-regulated ion channel family protein CYCLIC NUCLEOTIDE-GATED CHANNEL 2,
CYCLIC NUCLEOTIDE GATED CHANNEL 2,
DEFENSE NO DEATH 1		 -0.65 0.34 -0.32
56 AT5G12310 RING/U-box superfamily protein 0.65 0.3 -0.34
57 AT4G28990 RNA-binding protein-related -0.64 0.3 -0.3
58 AT2G29390 sterol 4-alpha-methyl-oxidase 2-2 STEROL 4-ALPHA-METHYL-OXIDASE 2,
Arabidopsis thaliana sterol
4-alpha-methyl-oxidase 2-2, sterol
4-alpha-methyl-oxidase 2-2		 0.64 0.33 -0.31
59 AT1G15880 golgi snare 11 atgos11, golgi snare 11 0.64 0.32 -0.32
60 AT3G05660 receptor like protein 33 receptor like protein 33, receptor
like protein 33		 -0.64 0.31 -0.32
61 AT4G27450 Aluminium induced protein with YGL and LRDR motifs 0.64 0.31 -0.32
62 AT2G40110 Yippee family putative zinc-binding protein 0.64 0.3 -0.33
63 AT1G05910 cell division cycle protein 48-related / CDC48-related -0.64 0.3 -0.3
64 AT1G72040 P-loop containing nucleoside triphosphate hydrolases
superfamily protein		 -0.63 0.33 -0.31
65 AT5G51170 unknown protein; CONTAINS InterPro DOMAIN/s:
Uncharacterised protein family UPF0406
(InterPro:IPR019146); Has 30201 Blast hits to 17322
proteins in 780 species: Archae - 12; Bacteria - 1396;
Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0;
Other Eukaryotes - 2996 (source: NCBI BLink).		 0.63 0.31 -0.31
66 AT4G23860 PHD finger protein-related -0.63 0.31 -0.32
67 AT3G12280 retinoblastoma-related 1 RETINOBLASTOMA-RELATED PROTEIN 1,
RB, RETINOBLASTOMA 1,
RETINOBLASTOMA-RELATED,
retinoblastoma-related 1		 -0.63 0.31 -0.34
68 AT3G23810 S-adenosyl-l-homocysteine (SAH) hydrolase 2 S-ADENOSYL-L-HOMOCYSTEINE (SAH)
HYDROLASE 2,
S-adenosyl-l-homocysteine (SAH)
hydrolase 2		 -0.63 0.31 -0.31
69 AT2G43060 ILI1 binding bHLH 1 ILI1 binding bHLH 1 0.63 0.31 -0.32
70 AT2G42150 DNA-binding bromodomain-containing protein -0.63 0.31 -0.3
71 AT3G22220 hAT transposon superfamily 0.62 0.33 -0.34
72 AT1G09350 galactinol synthase 3 galactinol synthase 3, galactinol
synthase 3		 -0.62 0.35 -0.3
73 AT1G32700 PLATZ transcription factor family protein 0.62 0.3 -0.32
74 AT4G36780 BES1/BZR1 homolog 2 BES1/BZR1 homolog 2 0.62 0.32 -0.28
75 AT2G24050 MIF4G domain-containing protein / MA3 domain-containing
protein		 eukaryotic translation Initiation
Factor isoform 4G2		 -0.62 0.32 -0.35
76 AT1G47530 MATE efflux family protein -0.62 0.32 -0.3
77 AT5G17240 SET domain group 40 SET domain group 40 -0.62 0.31 -0.32
78 AT1G65060 4-coumarate:CoA ligase 3 4-coumarate:CoA ligase 3 -0.62 0.35 -0.32
79 AT1G10490 Domain of unknown function (DUF1726) ;Putative ATPase
(DUF699)		 -0.62 0.31 -0.32
80 AT3G17770 Dihydroxyacetone kinase 0.62 0.33 -0.31
81 AT5G54720 Ankyrin repeat family protein -0.62 0.3 -0.31
82 AT1G80440 Galactose oxidase/kelch repeat superfamily protein 0.62 0.33 -0.32
83 AT5G28290 NIMA-related kinase 3 NIMA-related kinase 3,
NIMA-related kinase 3		 -0.61 0.33 -0.32
84 AT2G34470 urease accessory protein G PSKF109, urease accessory protein
G		 0.61 0.32 -0.32
85 AT4G07410 Transducin family protein / WD-40 repeat family protein POPCORN -0.61 0.31 -0.33
86 AT1G71860 protein tyrosine phosphatase 1 ATPTP1, protein tyrosine
phosphatase 1		 0.61 0.3 -0.31
87 AT5G42750 BRI1 kinase inhibitor 1 BRI1 kinase inhibitor 1 0.61 0.33 -0.31
88 AT1G23870 trehalose-phosphatase/synthase 9 trehalose-phosphatase/synthase 9,
TREHALOSE -6-PHOSPHATASE SYNTHASE
S9, trehalose-phosphatase/synthase
9		 0.61 0.3 -0.32
89 AT1G56070 Ribosomal protein S5/Elongation factor G/III/V family
protein		 LOW EXPRESSION OF OSMOTICALLY
RESPONSIVE GENES 1		 -0.61 0.32 -0.31
90 AT3G61820 Eukaryotic aspartyl protease family protein -0.61 0.31 -0.31
91 AT1G76810 eukaryotic translation initiation factor 2 (eIF-2) family
protein		 -0.6 0.32 -0.3
92 AT3G20090 cytochrome P450, family 705, subfamily A, polypeptide 18 cytochrome P450, family 705,
subfamily A, polypeptide 18		 0.6 0.3 -0.3
93 AT1G79090 FUNCTIONS IN: molecular_function unknown; INVOLVED IN:
biological_process unknown; LOCATED IN: cellular_component
unknown; EXPRESSED IN: 25 plant structures; EXPRESSED
DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s:
Topoisomerase II-associated protein PAT1
(InterPro:IPR019167); BEST Arabidopsis thaliana protein
match is: Topoisomerase II-associated protein PAT1
(TAIR:AT3G22270.1); Has 30201 Blast hits to 17322 proteins
in 780 species: Archae - 12; Bacteria - 1396; Metazoa -
17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other
Eukaryotes - 2996 (source: NCBI BLink).		 -0.6 0.32 -0.32
94 AT1G63670 Protein of unknown function (DUF3741) -0.6 0.3 -0.31
95 AT2G15230 lipase 1 lipase 1, lipase 1 0.6 0.32 -0.32
96 AT1G48650 DEA(D/H)-box RNA helicase family protein -0.6 0.34 -0.31
97 AT1G58290 Glutamyl-tRNA reductase family protein Arabidopsis thaliana hemA 1, HEMA1 -0.6 0.34 -0.33
98 AT5G07870 HXXXD-type acyl-transferase family protein 0.6 0.31 -0.31
99 AT3G16630 P-loop containing nucleoside triphosphate hydrolases
superfamily protein		 ATKINESIN-13A, KINESIN-13A -0.6 0.31 -0.3
100 AT1G76560 CP12 domain-containing protein 3 CP12 domain-containing protein 3 0.6 0.32 -0.32
101 AT5G21170 5'-AMP-activated protein kinase beta-2 subunit protein AKINBETA1 0.6 0.31 -0.32
102 AT1G21460 Nodulin MtN3 family protein AtSWEET1, SWEET1 -0.6 0.34 -0.3
103 AT4G00310 Putative membrane lipoprotein EMBRYO SAC DEVELOPMENT ARREST 8,
MATERNAL EFFECT EMBRYO ARREST 46		 -0.6 0.32 -0.32
104 AT1G17050 solanesyl diphosphate synthase 2 solanesyl diphosphate synthase 2 -0.6 0.31 -0.3
105 AT1G03457 RNA-binding (RRM/RBD/RNP motifs) family protein 0.6 0.3 -0.31
106 AT1G26190 Phosphoribulokinase / Uridine kinase family -0.6 0.31 -0.3
107 AT1G63850 BTB/POZ domain-containing protein -0.59 0.29 -0.33
108 AT5G52380 VASCULAR-RELATED NAC-DOMAIN 6 -0.59 0.33 -0.3
109 AT5G64150 RNA methyltransferase family protein -0.59 0.34 -0.32
110 AT1G51610 Cation efflux family protein -0.59 0.33 -0.34
111 AT1G73350 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
nucleus; EXPRESSED IN: 25 plant structures; EXPRESSED
DURING: 15 growth stages; Has 46 Blast hits to 46 proteins
in 19 species: Archae - 0; Bacteria - 0; Metazoa - 3; Fungi
- 3; Plants - 36; Viruses - 0; Other Eukaryotes - 4
(source: NCBI BLink).		 -0.59 0.33 -0.31
112 AT5G20360 Octicosapeptide/Phox/Bem1p (PB1) domain-containing protein
/ tetratricopeptide repeat (TPR)-containing protein		 Phox3 -0.59 0.32 -0.34
113 AT5G63630 P-loop containing nucleoside triphosphate hydrolases
superfamily protein		 -0.59 0.3 -0.31
Metabolite information
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  CID Metabolite name Pathway Information Correlation link
Compound name Stereochemistry Aracyc name pcc 2.5% 97.5% PPI
114 C0038 5-(Methylthio)pentylglucosinolate - 5-Methylthiopentylglucosinolate glucosinolate biosynthesis from trihomomethionine -0.67 0.45 -0.43 C0038
115 C0033 4-(Methylsulfinyl)butylglucosinolate - 4-Methylsulfinylbutyl glucosinolate glucosinolate biosynthesis from dihomomethionine -0.63 0.45 -0.44 C0033