AGICode | AT4G09800 |
Description | S18 ribosomal protein |
Gene Code | Description / Information | Gene name | Correlation | link | ||||
---|---|---|---|---|---|---|---|---|
pcc | 2.5% | 97.5% | PPI | |||||
1 | AT4G09800 | S18 ribosomal protein | S18 ribosomal protein | 1 | 0.34 | -0.34 | ||
2 | AT4G33250 | eukaryotic translation initiation factor 3K | ATTIF3K1, eukaryotic translation initiation factor 3K, TIF3K1 |
0.9 | 0.33 | -0.32 | ||
3 | AT3G09500 | Ribosomal L29 family protein | 0.89 | 0.3 | -0.3 | |||
4 | AT4G34670 | Ribosomal protein S3Ae | 0.87 | 0.32 | -0.37 | |||
5 | AT3G02560 | Ribosomal protein S7e family protein | 0.87 | 0.34 | -0.3 | |||
6 | AT5G16070 | TCP-1/cpn60 chaperonin family protein | 0.86 | 0.3 | -0.32 | |||
7 | AT5G06360 | Ribosomal protein S8e family protein | 0.86 | 0.3 | -0.32 | |||
8 | AT1G49600 | RNA-binding protein 47A | RNA-binding protein 47A, RNA-binding protein 47A |
0.86 | 0.31 | -0.32 | ||
9 | AT1G73230 | Nascent polypeptide-associated complex NAC | 0.85 | 0.31 | -0.29 | |||
10 | AT2G36160 | Ribosomal protein S11 family protein | 0.85 | 0.29 | -0.34 | |||
11 | AT1G49760 | poly(A) binding protein 8 | poly(A) binding protein 8, POLY(A) BINDING PROTEIN 8 |
0.85 | 0.3 | -0.31 | ||
12 | AT5G02450 | Ribosomal protein L36e family protein | 0.85 | 0.35 | -0.35 | |||
13 | AT1G69620 | ribosomal protein L34 | ribosomal protein L34 | 0.84 | 0.32 | -0.33 | ||
14 | AT1G08360 | Ribosomal protein L1p/L10e family | 0.84 | 0.32 | -0.34 | |||
15 | AT3G02080 | Ribosomal protein S19e family protein | 0.84 | 0.34 | -0.31 | |||
16 | AT2G46230 | PIN domain-like family protein | 0.83 | 0.31 | -0.32 | |||
17 | AT1G22780 | Ribosomal protein S13/S18 family | POINTED FIRST LEAVES, POINTED FIRST LEAVES 1, 40S RIBOSOMAL PROTEIN S18 |
0.83 | 0.3 | -0.33 | ||
18 | AT5G10360 | Ribosomal protein S6e | embryo defective 3010, Ribosomal protein small subunit 6b |
0.83 | 0.31 | -0.32 | ||
19 | AT5G35530 | Ribosomal protein S3 family protein | 0.82 | 0.33 | -0.32 | |||
20 | AT5G23900 | Ribosomal protein L13e family protein | 0.82 | 0.3 | -0.32 | |||
21 | AT3G08860 | PYRIMIDINE 4 | PYRIMIDINE 4 | -0.82 | 0.31 | -0.31 | ||
22 | AT5G23140 | nuclear-encoded CLP protease P7 | CLPP2, nuclear-encoded CLP protease P7 |
0.81 | 0.33 | -0.29 | ||
23 | AT2G41840 | Ribosomal protein S5 family protein | 0.81 | 0.3 | -0.29 | |||
24 | AT1G48830 | Ribosomal protein S7e family protein | 0.81 | 0.32 | -0.32 | |||
25 | AT2G23070 | Protein kinase superfamily protein | 0.81 | 0.33 | -0.32 | |||
26 | AT2G30550 | alpha/beta-Hydrolases superfamily protein | -0.81 | 0.31 | -0.33 | |||
27 | AT1G09760 | U2 small nuclear ribonucleoprotein A | U2 small nuclear ribonucleoprotein A |
0.81 | 0.3 | -0.32 | ||
28 | AT5G63140 | purple acid phosphatase 29 | purple acid phosphatase 29, PAP29, purple acid phosphatase 29 |
0.81 | 0.31 | -0.31 | ||
29 | AT3G08870 | Concanavalin A-like lectin protein kinase family protein | -0.81 | 0.31 | -0.31 | |||
30 | AT3G14600 | Ribosomal protein L18ae/LX family protein | 0.8 | 0.32 | -0.31 | |||
31 | AT1G15930 | Ribosomal protein L7Ae/L30e/S12e/Gadd45 family protein | 0.8 | 0.31 | -0.33 | |||
32 | AT4G30220 | small nuclear ribonucleoprotein F | small nuclear ribonucleoprotein F | 0.8 | 0.31 | -0.32 | ||
33 | AT1G62540 | flavin-monooxygenase glucosinolate S-oxygenase 2 | flavin-monooxygenase glucosinolate S-oxygenase 2 |
-0.8 | 0.3 | -0.31 | ||
34 | AT1G07770 | ribosomal protein S15A | ribosomal protein S15A | 0.8 | 0.32 | -0.34 | ||
35 | AT4G36210 | Protein of unknown function (DUF726) | -0.8 | 0.33 | -0.31 | |||
36 | AT4G26270 | phosphofructokinase 3 | phosphofructokinase 3 | -0.8 | 0.3 | -0.31 | ||
37 | AT1G03290 | unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT4G02880.2); Has 13587 Blast hits to 10183 proteins in 1114 species: Archae - 257; Bacteria - 2402; Metazoa - 5637; Fungi - 960; Plants - 675; Viruses - 54; Other Eukaryotes - 3602 (source: NCBI BLink). |
-0.8 | 0.33 | -0.33 | |||
38 | AT2G46680 | homeobox 7 | homeobox 7, ARABIDOPSIS THALIANA HOMEOBOX 7, homeobox 7 |
-0.8 | 0.33 | -0.31 | ||
39 | AT1G12270 | stress-inducible protein, putative | Hop1 | 0.8 | 0.3 | -0.31 | ||
40 | AT3G61890 | homeobox 12 | homeobox 12, ARABIDOPSIS THALIANA HOMEOBOX 12, homeobox 12 |
-0.79 | 0.33 | -0.31 | ||
41 | AT1G04270 | cytosolic ribosomal protein S15 | cytosolic ribosomal protein S15 | 0.79 | 0.3 | -0.32 | ||
42 | AT1G25260 | Ribosomal protein L10 family protein | 0.79 | 0.33 | -0.33 | |||
43 | AT5G26360 | TCP-1/cpn60 chaperonin family protein | 0.79 | 0.32 | -0.32 | |||
44 | AT4G24450 | phosphoglucan, water dikinase | ATGWD2, GWD3, phosphoglucan, water dikinase |
-0.78 | 0.31 | -0.31 | ||
45 | AT5G16130 | Ribosomal protein S7e family protein | 0.78 | 0.3 | -0.31 | |||
46 | AT3G46450 | SEC14 cytosolic factor family protein / phosphoglyceride transfer family protein |
-0.78 | 0.3 | -0.31 | |||
47 | AT3G51010 | unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: mitochondrion, plastid; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; Has 24 Blast hits to 24 proteins in 9 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 24; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). |
0.78 | 0.3 | -0.33 | |||
48 | AT1G78130 | Major facilitator superfamily protein | unfertilized embryo sac 2 | -0.78 | 0.31 | -0.32 | ||
49 | AT5G27470 | seryl-tRNA synthetase / serine--tRNA ligase | 0.78 | 0.32 | -0.32 | |||
50 | AT5G57020 | myristoyl-CoA:protein N-myristoyltransferase | ARABIDOPSIS THALIANA MYRISTOYL-COA:PROTEIN N-MYRISTOYLTRANSFERASE, myristoyl-CoA:protein N-myristoyltransferase |
0.77 | 0.3 | -0.31 | ||
51 | AT5G23290 | prefoldin 5 | prefoldin 5 | 0.77 | 0.33 | -0.33 | ||
52 | AT5G28060 | Ribosomal protein S24e family protein | 0.77 | 0.32 | -0.32 | |||
53 | AT5G14600 | S-adenosyl-L-methionine-dependent methyltransferases superfamily protein |
0.77 | 0.32 | -0.29 | |||
54 | AT1G43710 | Pyridoxal phosphate (PLP)-dependent transferases superfamily protein |
embryo defective 1075 | 0.77 | 0.32 | -0.33 | ||
55 | AT5G02620 | ankyrin-like1 | ankyrin-like1, ATANK1 | -0.77 | 0.3 | -0.32 | ||
56 | AT3G55380 | ubiquitin-conjugating enzyme 14 | ubiquitin-conjugating enzyme 14 | 0.77 | 0.34 | -0.33 | ||
57 | AT3G46040 | ribosomal protein S15A D | ribosomal protein S15A D | 0.77 | 0.32 | -0.3 | ||
58 | AT3G57610 | adenylosuccinate synthase | adenylosuccinate synthase | 0.76 | 0.29 | -0.3 | ||
59 | AT2G33380 | Caleosin-related family protein | Arabidopsis thaliana caleosin 3, caleosin 3, caleosin 3, RESPONSIVE TO DESSICATION 20 |
-0.76 | 0.29 | -0.32 | ||
60 | AT1G20220 | Alba DNA/RNA-binding protein | 0.76 | 0.33 | -0.31 | |||
61 | AT5G57370 | unknown protein; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF1777 (InterPro:IPR013957); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). |
0.76 | 0.31 | -0.31 | |||
62 | AT5G59310 | lipid transfer protein 4 | lipid transfer protein 4 | -0.75 | 0.31 | -0.32 | ||
63 | AT5G60360 | aleurain-like protease | aleurain-like protease, aleurain-like protease, SENESCENCE ASSOCIATED GENE2 |
-0.74 | 0.31 | -0.3 | ||
64 | AT1G13090 | cytochrome P450, family 71, subfamily B, polypeptide 28 | cytochrome P450, family 71, subfamily B, polypeptide 28 |
-0.74 | 0.3 | -0.32 | ||
65 | AT3G15790 | methyl-CPG-binding domain 11 | ATMBD11, methyl-CPG-binding domain 11 |
-0.74 | 0.33 | -0.32 | ||
66 | AT1G73040 | Mannose-binding lectin superfamily protein | -0.74 | 0.31 | -0.32 | |||
67 | AT2G35680 | Phosphotyrosine protein phosphatases superfamily protein | -0.74 | 0.31 | -0.29 | |||
68 | AT3G17700 | cyclic nucleotide-binding transporter 1 | CYCLIC NUCLEOTIDE-GATED CHANNEL 20, cyclic nucleotide-binding transporter 1, CNGC20 |
-0.73 | 0.32 | -0.29 | ||
69 | AT4G39210 | Glucose-1-phosphate adenylyltransferase family protein | APL3 | -0.72 | 0.3 | -0.3 | ||
70 | AT1G29400 | MEI2-like protein 5 | MEI2-like protein 5, MEI2-like protein 5 |
-0.72 | 0.31 | -0.32 | ||
71 | AT5G08380 | alpha-galactosidase 1 | alpha-galactosidase 1, alpha-galactosidase 1 |
-0.72 | 0.27 | -0.32 | ||
72 | AT1G79520 | Cation efflux family protein | -0.71 | 0.3 | -0.31 | |||
73 | AT1G17745 | D-3-phosphoglycerate dehydrogenase | 3-phosphoglycerate dehydrogenase | -0.7 | 0.31 | -0.31 | ||
74 | AT4G17030 | expansin-like B1 | AT-EXPR, expansin-like B1, ATEXPR1, ATHEXP BETA 3.1, expansin-like B1, EXPR |
-0.7 | 0.32 | -0.34 | ||
75 | AT1G11840 | glyoxalase I homolog | glyoxalase I homolog, glyoxalase I homolog |
-0.7 | 0.3 | -0.32 | ||
76 | AT4G32940 | gamma vacuolar processing enzyme | gamma vacuolar processing enzyme, GAMMAVPE |
-0.7 | 0.31 | -0.3 | ||
77 | AT2G43570 | chitinase, putative | chitinase, putative | -0.69 | 0.31 | -0.3 | ||
78 | AT2G40435 | BEST Arabidopsis thaliana protein match is: transcription regulators (TAIR:AT3G56220.1); Has 289 Blast hits to 289 proteins in 30 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 289; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). |
-0.69 | 0.3 | -0.3 | |||
79 | AT4G19960 | K+ uptake permease 9 | ATKUP9, HAK9, KT9, K+ uptake permease 9 |
-0.69 | 0.32 | -0.32 | ||
80 | AT1G28230 | purine permease 1 | ATPUP1, purine permease 1 | -0.68 | 0.31 | -0.3 | ||
81 | AT2G47770 | TSPO(outer membrane tryptophan-rich sensory protein)-related |
TSPO(outer membrane tryptophan-rich sensory protein)-related, TSPO(outer membrane tryptophan-rich sensory protein)-related |
-0.68 | 0.31 | -0.33 | ||
82 | AT4G19390 | Uncharacterised protein family (UPF0114) | -0.67 | 0.33 | -0.32 | |||
83 | AT1G01830 | ARM repeat superfamily protein | -0.67 | 0.32 | -0.31 | |||
84 | AT1G56650 | production of anthocyanin pigment 1 | MYB DOMAIN PROTEIN 75, MYELOBLASTOSIS PROTEIN 75, production of anthocyanin pigment 1, SUC-INDUCED ANTHOCYANIN ACCUMULATION 1 |
-0.67 | 0.31 | -0.33 | ||
85 | AT2G39030 | Acyl-CoA N-acyltransferases (NAT) superfamily protein | N-acetyltransferase activity 1 | -0.66 | 0.32 | -0.32 | ||
86 | AT5G54610 | ankyrin | ankyrin | -0.66 | 0.3 | -0.31 | ||
87 | AT4G30960 | SOS3-interacting protein 3 | CBL-INTERACTING PROTEIN KINASE 6, CBL-INTERACTING PROTEIN KINASE 6, SOS3-interacting protein 3, SNF1-RELATED PROTEIN KINASE 3.14 |
-0.66 | 0.35 | -0.31 | ||
88 | AT5G53870 | early nodulin-like protein 1 | AtENODL1, early nodulin-like protein 1 |
-0.66 | 0.3 | -0.32 | ||
89 | AT1G52400 | beta glucosidase 18 | A. THALIANA BETA-GLUCOSIDASE 1, BETA-GLUCOSIDASE HOMOLOG 1, beta glucosidase 18 |
-0.66 | 0.31 | -0.33 | ||
90 | AT1G33270 | Acyl transferase/acyl hydrolase/lysophospholipase superfamily protein |
-0.65 | 0.3 | -0.33 | |||
91 | AT3G16030 | lectin protein kinase family protein | CALLUS EXPRESSION OF RBCS 101 | -0.65 | 0.3 | -0.29 | ||
92 | AT2G42950 | Magnesium transporter CorA-like family protein | -0.65 | 0.33 | -0.33 |
CID | Metabolite name | Pathway Information | Correlation | link | ||||||
---|---|---|---|---|---|---|---|---|---|---|
Compound name | Stereochemistry | Aracyc name | pcc | 2.5% | 97.5% | PPI | ||||
93 | C0131 | Kaempferol-3-O-β-glucopyranoside-7-O-α-rhamnopyranoside | Kaempferol-3-O-β-D-glucopyranoside-7-O-α-L-rhamnopyranoside | Kaempferol-3-glucoside-7-rhamnoside | kaempferol glucoside biosynthesis (Arabidopsis) | -0.71 | 0.48 | -0.45 | ||
94 | C0184 | MST_3110.4 | - | - | - | -0.68 | 0.46 | -0.43 | ||
95 | C0216 | Proline | L-Proline | L-Proline | proline degradation II, arginine degradation VI (arginase 2 pathway), L-Ndelta-acetylornithine biosynthesis, tRNA charging, citrulline biosynthesis, proline biosynthesis III |
-0.67 | 0.33 | -0.34 |