AT4G09540 : -
Query Information
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AGICode AT4G09540
Description transposable element gene
Gene information
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  Gene Code Description / Information Gene name Correlation link
pcc 2.5% 97.5% PPI
1 AT4G09540 transposable element gene 1 0.32 -0.31
2 AT2G16210 Transcriptional factor B3 family protein -0.73 0.33 -0.3
3 AT3G04900 Heavy metal transport/detoxification superfamily protein 0.72 0.33 -0.29
4 AT5G15110 Pectate lyase family protein -0.71 0.32 -0.32
5 AT5G58050 SHV3-like 4 Glycerophosphodiester
phosphodiesterase (GDPD) like 6,
SHV3-like 4		 -0.7 0.33 -0.32
6 AT2G31100 alpha/beta-Hydrolases superfamily protein -0.68 0.29 -0.31
7 AT4G08330 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN: plasma
membrane; EXPRESSED IN: 24 plant structures; EXPRESSED
DURING: 14 growth stages; BEST Arabidopsis thaliana protein
match is: unknown protein (TAIR:AT2G17705.1); Has 98 Blast
hits to 98 proteins in 13 species: Archae - 0; Bacteria -
0; Metazoa - 0; Fungi - 0; Plants - 98; Viruses - 0; Other
Eukaryotes - 0 (source: NCBI BLink).		 0.68 0.31 -0.3
8 AT4G10880 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT4G10870.1); Has 1807 Blast hits
to 1807 proteins in 277 species: Archae - 0; Bacteria - 0;
Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0;
Other Eukaryotes - 339 (source: NCBI BLink).		 -0.68 0.32 -0.29
9 AT1G02540 unknown protein; Has 3327 Blast hits to 2216 proteins in
265 species: Archae - 18; Bacteria - 202; Metazoa - 802;
Fungi - 283; Plants - 84; Viruses - 187; Other Eukaryotes -
1751 (source: NCBI BLink).		 -0.68 0.31 -0.33
10 AT4G32920 glycine-rich protein -0.67 0.32 -0.31
11 AT3G29796 unknown protein; Has 28 Blast hits to 20 proteins in 8
species: Archae - 0; Bacteria - 0; Metazoa - 18; Fungi - 0;
Plants - 1; Viruses - 0; Other Eukaryotes - 9 (source: NCBI
BLink).		 -0.67 0.33 -0.31
12 AT2G20880 Integrase-type DNA-binding superfamily protein AtERF53, ERF domain 53 -0.67 0.32 -0.31
13 AT4G31610 Transcriptional factor B3 family protein REPRODUCTIVE MERISTEM 1,
REPRODUCTIVE MERISTEM 1		 -0.65 0.32 -0.3
14 AT3G16380 poly(A) binding protein 6 poly(A) binding protein 6 -0.65 0.34 -0.32
15 AT5G52160 Bifunctional inhibitor/lipid-transfer protein/seed storage
2S albumin superfamily protein		 -0.65 0.3 -0.33
16 AT4G13420 high affinity K+ transporter 5 ARABIDOPSIS THALIANA HIGH AFFINITY
K+ TRANSPORTER 5, high affinity K+
transporter 5		 -0.65 0.32 -0.31
17 AT3G42390 unknown protein; Has 1 Blast hits to 1 proteins in 1
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 1; Viruses - 0; Other Eukaryotes - 0 (source: NCBI
BLink).		 0.65 0.31 -0.34
18 AT1G29600 Zinc finger C-x8-C-x5-C-x3-H type family protein 0.65 0.32 -0.3
19 AT5G38610 Plant invertase/pectin methylesterase inhibitor superfamily
protein		 0.64 0.31 -0.3
20 AT4G33900 Galactose oxidase/kelch repeat superfamily protein 0.64 0.31 -0.32
21 AT1G31760 SWIB/MDM2 domain superfamily protein 0.64 0.33 -0.32
22 AT3G22170 far-red elongated hypocotyls 3 far-red elongated hypocotyls 3 -0.64 0.31 -0.3
23 AT5G38340 Disease resistance protein (TIR-NBS-LRR class) family -0.63 0.33 -0.3
24 AT3G43500 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT1G42080.1); Has 8 Blast hits to
8 proteins in 2 species: Archae - 0; Bacteria - 0; Metazoa
- 0; Fungi - 0; Plants - 8; Viruses - 0; Other Eukaryotes -
0 (source: NCBI BLink).		 0.63 0.31 -0.31
25 AT1G48095 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT1G36960.1); Has 82 Blast hits
to 82 proteins in 3 species: Archae - 0; Bacteria - 0;
Metazoa - 0; Fungi - 0; Plants - 82; Viruses - 0; Other
Eukaryotes - 0 (source: NCBI BLink).		 -0.63 0.3 -0.33
26 AT3G45630 RNA binding (RRM/RBD/RNP motifs) family protein -0.63 0.31 -0.31
27 AT5G39370 Curculin-like (mannose-binding) lectin family protein 0.63 0.32 -0.31
28 AT1G69010 BES1-interacting Myc-like protein 2 BES1-interacting Myc-like protein
2		 0.63 0.31 -0.34
29 AT2G36760 UDP-glucosyl transferase 73C2 UDP-glucosyl transferase 73C2 -0.63 0.33 -0.31
30 AT4G34850 Chalcone and stilbene synthase family protein LESS ADHESIVE POLLEN 5 -0.63 0.29 -0.3
31 AT1G59950 NAD(P)-linked oxidoreductase superfamily protein -0.63 0.29 -0.32
32 AT1G23640 unknown protein; LOCATED IN: chloroplast; EXPRESSED IN:
petal, leaf whorl, sepal, flower; EXPRESSED DURING: 4
anthesis, petal differentiation and expansion stage;
CONTAINS InterPro DOMAIN/s: Protein of unknown function
DUF220 (InterPro:IPR003863); BEST Arabidopsis thaliana
protein match is: Domain of unknown function DUF220
(TAIR:AT1G23660.1); Has 270 Blast hits to 130 proteins in
12 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi -
0; Plants - 270; Viruses - 0; Other Eukaryotes - 0 (source:
NCBI BLink).		 0.63 0.3 -0.31
33 AT3G42850 Mevalonate/galactokinase family protein -0.62 0.33 -0.32
34 AT5G52690 Copper transport protein family 0.62 0.31 -0.33
35 AT3G48960 Ribosomal protein L13e family protein -0.62 0.34 -0.31
36 AT3G44570 Arabidopsis retrotransposon ORF-1 protein 0.62 0.31 -0.32
37 AT1G70910 RING/U-box superfamily protein DESPIERTO 0.61 0.3 -0.33
38 AT1G54700 FUNCTIONS IN: molecular_function unknown; INVOLVED IN:
biological_process unknown; LOCATED IN: mitochondrion;
CONTAINS InterPro DOMAIN/s: Serine endopeptidase DegP2
(InterPro:IPR015724); BEST Arabidopsis thaliana protein
match is: DegP protease 13 (TAIR:AT5G40560.1); Has 78 Blast
hits to 78 proteins in 13 species: Archae - 0; Bacteria -
0; Metazoa - 0; Fungi - 0; Plants - 78; Viruses - 0; Other
Eukaryotes - 0 (source: NCBI BLink).		 0.61 0.32 -0.32
39 AT5G25410 Protein of Unknown Function (DUF239) -0.61 0.33 -0.32
40 AT3G53150 UDP-glucosyl transferase 73D1 UDP-glucosyl transferase 73D1 0.61 0.3 -0.29
41 AT4G36370 unknown protein; Has 3 Blast hits to 3 proteins in 1
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 3; Viruses - 0; Other Eukaryotes - 0 (source: NCBI
BLink).		 -0.61 0.33 -0.31
42 AT1G49150 unknown protein; Has 6 Blast hits to 6 proteins in 2
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 6; Viruses - 0; Other Eukaryotes - 0 (source: NCBI
BLink).		 -0.61 0.34 -0.33
43 AT3G48770 DNA binding;ATP binding -0.61 0.3 -0.33
44 AT3G21550 DUF679 domain membrane protein 2 Arabidopsis thaliana DUF679 domain
membrane protein 2, DUF679 domain
membrane protein 2		 0.61 0.29 -0.31
45 AT3G42690 transposable element gene -0.6 0.33 -0.32
46 AT1G20480 AMP-dependent synthetase and ligase family protein 0.6 0.31 -0.33
47 AT5G52360 actin depolymerizing factor 10 actin depolymerizing factor 10 0.6 0.33 -0.31
48 AT4G17710 homeodomain GLABROUS 4 homeodomain GLABROUS 4 -0.6 0.31 -0.31
49 AT1G33890 Avirulence induced gene (AIG1) family protein -0.6 0.29 -0.32
50 AT4G04560 transposable element gene 0.6 0.32 -0.3
51 AT2G03320 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
endomembrane system; Has 4 Blast hits to 4 proteins in 2
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 4; Viruses - 0; Other Eukaryotes - 0 (source: NCBI
BLink).		 0.6 0.33 -0.34
52 AT1G36600 transposable element gene -0.6 0.31 -0.31
53 AT4G20290 unknown protein; Has 30201 Blast hits to 17322 proteins in
780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338;
Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes
- 2996 (source: NCBI BLink).		 0.59 0.32 -0.31
54 AT2G19630 F-box and associated interaction domains-containing protein -0.59 0.33 -0.32
55 AT1G24060 unknown protein; Has 7 Blast hits to 7 proteins in 2
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 7; Viruses - 0; Other Eukaryotes - 0 (source: NCBI
BLink).		 0.59 0.3 -0.3
56 AT5G48270 Plant protein of unknown function (DUF868) -0.59 0.33 -0.31
57 AT3G30846 transposable element gene 0.59 0.3 -0.33
58 AT3G55870 ADC synthase superfamily protein 0.59 0.3 -0.29
59 AT4G32540 Flavin-binding monooxygenase family protein YUCCA, YUCCA 1 0.59 0.32 -0.3
60 AT2G29100 glutamate receptor 2.9 glutamate receptor 2.9, GLUTAMATE
RECEPTOR 2.9, glutamate receptor
2.9		 0.59 0.31 -0.31
61 AT2G02830 transposable element gene -0.59 0.31 -0.34
62 AT1G09940 Glutamyl-tRNA reductase family protein HEMA2 -0.59 0.29 -0.32
63 AT1G28470 NAC domain containing protein 10 NAC domain containing protein 10,
NAC domain containing protein 10,
SECONDARY WALL-ASSOCIATED NAC
DOMAIN PROTEIN 3		 0.58 0.31 -0.33
64 AT4G02300 Plant invertase/pectin methylesterase inhibitor superfamily -0.58 0.32 -0.32
65 AT5G11530 embryonic flower 1 (EMF1) embryonic flower 1 0.58 0.31 -0.32
66 AT1G17590 nuclear factor Y, subunit A8 nuclear factor Y, subunit A8 -0.58 0.34 -0.31
67 AT4G24580 Rho GTPase activation protein (RhoGAP) with PH domain ROP1 ENHANCER 1 0.58 0.32 -0.33
68 AT1G50140 P-loop containing nucleoside triphosphate hydrolases
superfamily protein		 0.58 0.33 -0.31
69 AT1G58070 unknown protein; Has 286 Blast hits to 266 proteins in 81
species: Archae - 2; Bacteria - 25; Metazoa - 90; Fungi -
19; Plants - 78; Viruses - 4; Other Eukaryotes - 68
(source: NCBI BLink).		 0.58 0.29 -0.34
70 AT1G36150 Bifunctional inhibitor/lipid-transfer protein/seed storage
2S albumin superfamily protein		 -0.58 0.32 -0.33
71 AT4G08970 transposable element gene 0.58 0.33 -0.3
72 AT5G64905 elicitor peptide 3 precursor elicitor peptide 3 precursor -0.58 0.29 -0.3
73 AT3G30750 transposable element gene 0.58 0.32 -0.31
74 AT1G14530 Protein of unknown function (DUF1084) TOM THREE HOMOLOG 1 0.58 0.31 -0.33
75 AT5G51520 Plant invertase/pectin methylesterase inhibitor superfamily
protein		 -0.58 0.33 -0.34
76 AT1G17370 oligouridylate binding protein 1B oligouridylate binding protein 1B 0.58 0.33 -0.32
77 AT3G20140 cytochrome P450, family 705, subfamily A, polypeptide 23 cytochrome P450, family 705,
subfamily A, polypeptide 23		 0.58 0.33 -0.33
78 AT1G26350 unknown protein; Has 1 Blast hits to 1 proteins in 1
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 1; Viruses - 0; Other Eukaryotes - 0 (source: NCBI
BLink).		 -0.57 0.31 -0.31
79 AT2G16835 Aquaporin-like superfamily protein -0.57 0.34 -0.32
80 AT5G16790 Tho complex subunit 7/Mft1p AtTHO7, THO7 0.57 0.33 -0.29
81 AT1G71760 unknown protein; Has 92 Blast hits to 92 proteins in 41
species: Archae - 0; Bacteria - 0; Metazoa - 44; Fungi - 0;
Plants - 32; Viruses - 0; Other Eukaryotes - 16 (source:
NCBI BLink).		 0.57 0.31 -0.29
82 AT5G45640 Subtilisin-like serine endopeptidase family protein 0.57 0.34 -0.33
83 AT5G01860 C2H2 and C2HC zinc fingers superfamily protein -0.57 0.32 -0.33
84 AT1G53930 Ubiquitin-like superfamily protein 0.57 0.33 -0.34
85 AT5G36090 transposable element gene 0.57 0.37 -0.3
86 AT3G29160 SNF1 kinase homolog 11 SNF1 kinase homolog 11, SNF1
kinase homolog 11, SNF1 kinase
homolog 11, SNF1-RELATED PROTEIN
KINASE 1.2		 0.57 0.31 -0.31
87 AT3G31360 transposable element gene -0.57 0.31 -0.34
88 AT3G56630 cytochrome P450, family 94, subfamily D, polypeptide 2 cytochrome P450, family 94,
subfamily D, polypeptide 2		 -0.57 0.33 -0.3
89 AT4G11780 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT4G23020.2); Has 550 Blast hits
to 387 proteins in 92 species: Archae - 0; Bacteria - 32;
Metazoa - 132; Fungi - 122; Plants - 80; Viruses - 0; Other
Eukaryotes - 184 (source: NCBI BLink).		 0.57 0.3 -0.3
90 AT3G17440 novel plant snare 13 ATNPSN13, novel plant snare 13 0.56 0.31 -0.33
91 AT2G26810 Putative methyltransferase family protein 0.56 0.3 -0.32
92 AT3G46070 C2H2-type zinc finger family protein -0.56 0.32 -0.3
93 AT5G14470 GHMP kinase family protein 0.56 0.29 -0.32
94 AT4G07840 transposable element gene -0.56 0.32 -0.32
95 AT4G23520 Cysteine proteinases superfamily protein 0.56 0.32 -0.33
96 AT1G17040 SH2 domain protein A ARABIDOPSIS THALIANA SH2 DOMAIN
PROTEIN A, SH2 domain protein A,
STAT-TYPE LINKER-SH2 DOMAIN FACTOR
A		 0.56 0.31 -0.32
97 AT2G29050 RHOMBOID-like 1 RHOMBOID-like 1, RHOMBOID-like 1 0.56 0.33 -0.3
98 AT4G31000 Calmodulin-binding protein -0.56 0.31 -0.33
99 AT2G03210 fucosyltransferase 2 ATFUT2, fucosyltransferase 2 0.55 0.31 -0.33
100 AT3G32110 transposable element gene -0.55 0.31 -0.34
101 AT5G04560 HhH-GPD base excision DNA repair family protein DEMETER -0.55 0.31 -0.32
102 AT2G35580 Serine protease inhibitor (SERPIN) family protein 0.55 0.31 -0.31
103 AT4G17483 alpha/beta-Hydrolases superfamily protein 0.55 0.33 -0.32
104 AT1G77300 histone methyltransferases(H3-K4 specific);histone
methyltransferases(H3-K36 specific)		 ASH1 HOMOLOG 2, CAROTENOID
CHLOROPLAST REGULATORY1, EARLY
FLOWERING IN SHORT DAYS, LAZARUS
2, SET DOMAIN GROUP 8		 -0.55 0.32 -0.32
105 AT5G35710 transposable element gene 0.55 0.3 -0.3
106 AT4G35350 xylem cysteine peptidase 1 xylem cysteine peptidase 1 0.54 0.32 -0.32
107 AT4G36790 Major facilitator superfamily protein 0.54 0.35 -0.32
108 AT2G05720 Transducin/WD40 repeat-like superfamily protein 0.54 0.32 -0.31
109 AT3G28610 P-loop containing nucleoside triphosphate hydrolases
superfamily protein		 0.54 0.31 -0.31
110 AT4G24500 hydroxyproline-rich glycoprotein family protein 0.53 0.31 -0.3
111 AT3G07900 O-fucosyltransferase family protein 0.53 0.32 -0.32
112 ATCG01010 NADH-Ubiquinone oxidoreductase (complex I), chain 5 protein NDHF 0.53 0.29 -0.31
113 AT3G49070 Protein of unknown function (DUF677) 0.53 0.31 -0.31
114 AT4G33330 plant glycogenin-like starch initiation protein 3 glucuronic acid substitution of
xylan 2, plant glycogenin-like
starch initiation protein 3		 0.53 0.32 -0.31
115 AT1G05450 Bifunctional inhibitor/lipid-transfer protein/seed storage
2S albumin superfamily protein		 0.53 0.3 -0.3
116 AT5G45050 Disease resistance protein (TIR-NBS-LRR class) ATWRKY16, TOLERANT TO TOBACCO
RINGSPOT NEPOVIRUS 1, WRKY16		 0.53 0.3 -0.3