AT4G09720 : RAB GTPase homolog G3A
Query Information
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AGICode AT4G09720
Description RAB GTPase homolog G3A
Gene information
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  Gene Code Description / Information Gene name Correlation link
pcc 2.5% 97.5% PPI
1 AT4G09720 RAB GTPase homolog G3A RAB GTPase homolog G3A, RAB GTPase
homolog G3A		 1 0.32 -0.3
2 AT3G27080 translocase of outer membrane 20 kDa subunit 3 translocase of outer membrane 20
kDa subunit 3		 0.85 0.32 -0.32
3 AT5G24650 Mitochondrial import inner membrane translocase subunit
Tim17/Tim22/Tim23 family protein		 0.84 0.31 -0.31
4 AT4G09320 Nucleoside diphosphate kinase family protein NDPK1 0.84 0.33 -0.33
5 AT4G18040 eukaryotic translation initiation factor 4E ARABIDOPSIS THALIANA EUKARYOTIC
TRANSLATION INITATION FACTOR 4E1,
CUCUMOVIRUS MULTIPLICATION 1,
eukaryotic translation initiation
factor 4E, eukaryotic translation
Initiation Factor 4E1		 0.84 0.33 -0.32
6 AT4G00170 Plant VAMP (vesicle-associated membrane protein) family
protein		 0.83 0.3 -0.31
7 AT2G43640 Signal recognition particle, SRP9/SRP14 subunit 0.82 0.3 -0.32
8 AT3G46830 RAB GTPase homolog A2C ARABIDOPSIS RAB GTPASE HOMOLOG
A2C, ATRAB11A, RAB GTPase homolog
A2C, RAB GTPASE HOMOLOG A2C, RAB
GTPase homolog A2C		 0.82 0.32 -0.31
9 AT2G21290 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
mitochondrion; EXPRESSED IN: 22 plant structures; EXPRESSED
DURING: 13 growth stages; Has 63 Blast hits to 63 proteins
in 12 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi
- 0; Plants - 63; Viruses - 0; Other Eukaryotes - 0
(source: NCBI BLink).		 0.81 0.29 -0.35
10 AT1G14810 semialdehyde dehydrogenase family protein 0.8 0.31 -0.28
11 AT2G04520 Nucleic acid-binding, OB-fold-like protein 0.8 0.32 -0.33
12 AT3G05000 Transport protein particle (TRAPP) component 0.8 0.31 -0.31
13 AT2G01260 Protein of unknown function (DUF789) 0.79 0.32 -0.32
14 AT1G09330 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
integral to membrane; EXPRESSED IN: 24 plant structures;
EXPRESSED DURING: 15 growth stages; CONTAINS InterPro
DOMAIN/s: Protein of unknown function DUF846, eukaryotic
(InterPro:IPR008564); Has 518 Blast hits to 518 proteins in
206 species: Archae - 0; Bacteria - 0; Metazoa - 193; Fungi
- 145; Plants - 73; Viruses - 0; Other Eukaryotes - 107
(source: NCBI BLink).		 0.79 0.31 -0.33
15 AT1G15140 FAD/NAD(P)-binding oxidoreductase 0.78 0.3 -0.33
16 AT3G09820 adenosine kinase 1 adenosine kinase 1, ATADK1 0.78 0.32 -0.31
17 AT5G05010 clathrin adaptor complexes medium subunit family protein 0.78 0.32 -0.33
18 AT4G35000 ascorbate peroxidase 3 ascorbate peroxidase 3 0.78 0.31 -0.32
19 AT1G23490 ADP-ribosylation factor 1 ADP-ribosylation factor 1,
ADP-RIBOSYLATION FACTOR,
ADP-ribosylation factor 1,
ADP-RIBOSYLATION FACTOR 1A		 0.78 0.31 -0.33
20 AT2G31710 Vacuolar ATPase assembly integral membrane protein
VMA21-like domain		 0.77 0.33 -0.32
21 AT5G25080 Sas10/Utp3/C1D family 0.77 0.28 -0.31
22 AT2G21195 unknown protein; Has 28 Blast hits to 28 proteins in 11
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 28; Viruses - 0; Other Eukaryotes - 0 (source:
NCBI BLink).		 0.77 0.3 -0.33
23 AT2G46170 Reticulon family protein 0.77 0.32 -0.31
24 AT3G17390 S-adenosylmethionine synthetase family protein METHIONINE ADENOSYLTRANSFERASE 4,
METHIONINE OVER-ACCUMULATOR 3,
S-ADENOSYLMETHIONINE SYNTHETASE 3		 0.76 0.31 -0.33
25 AT4G14420 HR-like lesion-inducing protein-related 0.76 0.32 -0.32
26 AT2G33845 Nucleic acid-binding, OB-fold-like protein 0.76 0.3 -0.32
27 AT5G17560 BolA-like family protein 0.76 0.32 -0.31
28 AT5G23870 Pectinacetylesterase family protein 0.76 0.31 -0.35
29 AT5G06770 KH domain-containing protein / zinc finger (CCCH type)
family protein		 0.76 0.33 -0.31
30 AT2G27030 calmodulin 5 ACAM-2, calmodulin 5 0.76 0.3 -0.31
31 AT3G07230 wound-responsive protein-related 0.75 0.33 -0.29
32 AT2G30410 tubulin folding cofactor A (KIESEL) KIESEL, TUBULIN FOLDING FACTOR A 0.75 0.33 -0.31
33 AT1G26160 Metal-dependent phosphohydrolase 0.75 0.32 -0.3
34 AT3G16100 RAB GTPase homolog G3C ATRAB7D, RAB GTPase homolog G3C,
RAB GTPase homolog G3C		 0.75 0.29 -0.31
35 AT1G05430 unknown protein; Has 31 Blast hits to 31 proteins in 9
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 31; Viruses - 0; Other Eukaryotes - 0 (source:
NCBI BLink).		 0.75 0.3 -0.32
36 AT3G49560 Mitochondrial import inner membrane translocase subunit
Tim17/Tim22/Tim23 family protein		 0.74 0.3 -0.32
37 AT3G53580 diaminopimelate epimerase family protein 0.74 0.31 -0.32
38 AT1G78040 Pollen Ole e 1 allergen and extensin family protein 0.74 0.32 -0.34
39 AT5G14040 phosphate transporter 3;1 phosphate transporter 3;1 0.74 0.32 -0.33
40 AT1G18440 Peptidyl-tRNA hydrolase family protein 0.74 0.33 -0.32
41 AT1G11650 RNA-binding (RRM/RBD/RNP motifs) family protein ATRBP45B, RBP45B 0.74 0.31 -0.34
42 AT1G12310 Calcium-binding EF-hand family protein 0.73 0.32 -0.32
43 AT3G07470 Protein of unknown function, DUF538 0.73 0.34 -0.29
44 AT5G01410 Aldolase-type TIM barrel family protein ATPDX1, ARABIDOPSIS THALIANA
PYRIDOXINE BIOSYNTHESIS 1.3, PDX1,
PYRIDOXINE BIOSYNTHESIS 1.3,
REDUCED SUGAR RESPONSE 4		 0.73 0.33 -0.32
45 AT5G46790 PYR1-like 1 PYR1-like 1, regulatory components
of ABA receptor 12		 0.73 0.3 -0.32
46 AT5G59160 type one serine/threonine protein phosphatase 2 PROTOPORPHYRINOGEN OXIDASE, type
one serine/threonine protein
phosphatase 2		 0.73 0.33 -0.3
47 AT1G31500 DNAse I-like superfamily protein 0.73 0.32 -0.32
48 AT5G41950 Tetratricopeptide repeat (TPR)-like superfamily protein 0.72 0.31 -0.3
49 AT3G23640 heteroglycan glucosidase 1 heteroglycan glucosidase 1 -0.72 0.33 -0.33
50 AT5G65270 RAB GTPase homolog A4A RAB GTPase homolog A4A, RAB GTPase
homolog A4A		 0.72 0.31 -0.31
51 AT4G00810 60S acidic ribosomal protein family 0.72 0.33 -0.3
52 AT2G22660 Protein of unknown function (duplicated DUF1399) -0.71 0.32 -0.32
53 AT5G63560 HXXXD-type acyl-transferase family protein -0.7 0.32 -0.31
54 AT1G23120 Polyketide cyclase/dehydrase and lipid transport
superfamily protein		 -0.69 0.31 -0.33
55 AT2G25790 Leucine-rich receptor-like protein kinase family protein -0.69 0.31 -0.32
56 AT1G67310 Calmodulin-binding transcription activator protein with
CG-1 and Ankyrin domains		 -0.68 0.32 -0.29
57 AT1G69270 receptor-like protein kinase 1 receptor-like protein kinase 1 -0.67 0.33 -0.31
58 AT2G18370 Bifunctional inhibitor/lipid-transfer protein/seed storage
2S albumin superfamily protein		 -0.67 0.32 -0.29
59 AT3G49810 ARM repeat superfamily protein -0.67 0.32 -0.32
60 AT1G80440 Galactose oxidase/kelch repeat superfamily protein -0.66 0.31 -0.31
61 AT4G27260 Auxin-responsive GH3 family protein GH3.5, WES1 -0.66 0.33 -0.33
62 AT5G40340 Tudor/PWWP/MBT superfamily protein -0.65 0.31 -0.32
63 AT3G25990 Homeodomain-like superfamily protein -0.65 0.32 -0.32
64 AT3G09910 RAB GTPase homolog C2B ATRAB18C, RAB GTPase homolog C2B,
RAB GTPase homolog C2B		 -0.64 0.3 -0.31
65 AT2G22680 Zinc finger (C3HC4-type RING finger) family protein WAV3 homolog 1 -0.63 0.31 -0.3
66 AT1G14730 Cytochrome b561/ferric reductase transmembrane protein
family		 -0.63 0.32 -0.3
67 AT5G61060 histone deacetylase 5 ATHDA5, histone deacetylase 5,
HDA5		 -0.63 0.32 -0.33
68 AT2G12400 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
endomembrane system; EXPRESSED IN: 25 plant structures;
EXPRESSED DURING: 13 growth stages; BEST Arabidopsis
thaliana protein match is: unknown protein
(TAIR:AT2G25270.1); Has 177 Blast hits to 172 proteins in
23 species: Archae - 0; Bacteria - 2; Metazoa - 3; Fungi -
0; Plants - 164; Viruses - 0; Other Eukaryotes - 8 (source:
NCBI BLink).		 -0.63 0.34 -0.31
69 AT3G62730 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
endomembrane system; EXPRESSED IN: 13 plant structures;
EXPRESSED DURING: LP.04 four leaves visible, 4 anthesis,
LP.02 two leaves visible, petal differentiation and
expansion stage; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT1G47980.1); Has 172 Blast hits
to 172 proteins in 41 species: Archae - 0; Bacteria - 73;
Metazoa - 0; Fungi - 0; Plants - 99; Viruses - 0; Other
Eukaryotes - 0 (source: NCBI BLink).		 -0.62 0.32 -0.3
70 AT2G26700 AGC (cAMP-dependent, cGMP-dependent and protein kinase C)
kinase family protein		 PINOID2 -0.61 0.32 -0.31
71 AT1G49450 Transducin/WD40 repeat-like superfamily protein -0.59 0.32 -0.31
72 AT5G43810 Stabilizer of iron transporter SufD / Polynucleotidyl
transferase		 ARGONAUTE 10, PINHEAD, ZWILLE -0.59 0.32 -0.33
73 AT5G25990 FUNCTIONS IN: molecular_function unknown; INVOLVED IN:
biological_process unknown; LOCATED IN: chloroplast; BEST
Arabidopsis thaliana protein match is: Core-2/I-branching
beta-1,6-N-acetylglucosaminyltransferase family protein
(TAIR:AT5G25970.1); Has 1807 Blast hits to 1807 proteins in
277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi
- 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339
(source: NCBI BLink).		 -0.58 0.31 -0.33
74 AT1G44160 HSP40/DnaJ peptide-binding protein -0.58 0.31 -0.33
75 AT5G39910 Pectin lyase-like superfamily protein -0.57 0.32 -0.3
76 AT5G04380 S-adenosyl-L-methionine-dependent methyltransferases
superfamily protein		 -0.57 0.3 -0.31
Metabolite information
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  CID Metabolite name Pathway Information Correlation link
Compound name Stereochemistry Aracyc name pcc 2.5% 97.5% PPI
77 C0123 Isoleucine D,L-Isoleucine L-Isoleucine tRNA charging,
isoleucine biosynthesis I (from threonine),
jasmonoyl-amino acid conjugates biosynthesis I,
isoleucine degradation I 		-0.82 0.45 -0.44 C0123
78 C0260 Tyrosine L-(-)-Tyrosine L-Tyrosine tyrosine biosynthesis II,
4-hydroxyphenylpyruvate biosynthesis,
tyrosine degradation I,
tyrosine biosynthesis I,
tRNA charging,
hydroxycinnamic acid tyramine amides biosynthesis 		-0.73 0.3 -0.31 C0260
79 C0052 Adenosine - Adenosine adenine and adenosine salvage VI,
S-adenosyl-L-methionine cycle II,
cytokinins degradation,
methionine degradation I (to homocysteine),
adenine and adenosine salvage II 		-0.61 0.32 -0.32 C0052