AT4G08940 : -
Query Information
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AGICode AT4G08940
Description Ubiquitin carboxyl-terminal hydrolase family protein
Gene information
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  Gene Code Description / Information Gene name Correlation link
pcc 2.5% 97.5% PPI
1 AT4G08940 Ubiquitin carboxyl-terminal hydrolase family protein 1 0.32 -0.33
2 AT3G18380 sequence-specific DNA binding transcription
factors;sequence-specific DNA binding		 SAWADEE homeodomain homolog 2 0.79 0.3 -0.31
3 AT1G26210 SOB five-like 1 SOB FIVE-LIKE 1, SOB five-like 1 0.76 0.32 -0.31
4 AT2G03680 spiral1 SKU6, SPIRAL1 0.75 0.32 -0.32
5 AT1G14240 GDA1/CD39 nucleoside phosphatase family protein -0.74 0.33 -0.32
6 AT2G42760 unknown protein; CONTAINS InterPro DOMAIN/s: Protein of
unknown function DUF1685 (InterPro:IPR012881); Has 170
Blast hits to 164 proteins in 34 species: Archae - 0;
Bacteria - 1; Metazoa - 26; Fungi - 10; Plants - 107;
Viruses - 0; Other Eukaryotes - 26 (source: NCBI BLink).		 -0.74 0.31 -0.31
7 AT2G30040 mitogen-activated protein kinase kinase kinase 14 mitogen-activated protein kinase
kinase kinase 14		 -0.74 0.31 -0.31
8 AT1G68765 Putative membrane lipoprotein INFLORESCENCE DEFICIENT IN
ABSCISSION		 -0.74 0.31 -0.31
9 AT3G54950 patatin-like protein 6 patatin-like protein 6,
PATATIN-LIKE PROTEIN 7,
patatin-related phospholipase
IIIbeta		 -0.73 0.3 -0.31
10 AT4G01030 pentatricopeptide (PPR) repeat-containing protein 0.72 0.32 -0.33
11 AT5G44350 ethylene-responsive nuclear protein -related -0.72 0.3 -0.29
12 AT3G04550 unknown protein; INVOLVED IN: biological_process unknown;
LOCATED IN: chloroplast stroma, chloroplast; EXPRESSED IN:
22 plant structures; EXPRESSED DURING: 13 growth stages;
BEST Arabidopsis thaliana protein match is: unknown protein
(TAIR:AT5G28500.1); Has 110 Blast hits to 110 proteins in
51 species: Archae - 0; Bacteria - 67; Metazoa - 1; Fungi -
0; Plants - 41; Viruses - 0; Other Eukaryotes - 1 (source:
NCBI BLink).		 0.71 0.32 -0.33
13 AT3G23810 S-adenosyl-l-homocysteine (SAH) hydrolase 2 S-ADENOSYL-L-HOMOCYSTEINE (SAH)
HYDROLASE 2,
S-adenosyl-l-homocysteine (SAH)
hydrolase 2		 0.71 0.32 -0.31
14 AT1G73710 Pentatricopeptide repeat (PPR) superfamily protein 0.71 0.33 -0.31
15 AT1G28480 Thioredoxin superfamily protein GRX480, roxy19 -0.7 0.3 -0.31
16 AT2G40540 potassium transporter 2 ATKT2, ATKUP2, potassium
transporter 2, KUP2, SHY3, TRK2		 0.69 0.35 -0.33
17 AT4G29000 Tesmin/TSO1-like CXC domain-containing protein 0.69 0.31 -0.31
18 AT3G51490 tonoplast monosaccharide transporter3 tonoplast monosaccharide
transporter3		 0.69 0.32 -0.32
19 AT1G63080 Pentatricopeptide repeat (PPR) superfamily protein 0.68 0.32 -0.31
20 AT1G27950 glycosylphosphatidylinositol-anchored lipid protein
transfer 1		 glycosylphosphatidylinositol-ancho
red lipid protein transfer 1		 0.68 0.32 -0.3
21 AT3G25880 NAD(P)-binding Rossmann-fold superfamily protein 0.68 0.32 -0.32
22 AT1G74390 Polynucleotidyl transferase, ribonuclease H-like
superfamily protein		 0.68 0.29 -0.32
23 AT4G28940 Phosphorylase superfamily protein -0.68 0.29 -0.33
24 AT2G27080 Late embryogenesis abundant (LEA) hydroxyproline-rich
glycoprotein family		 -0.68 0.31 -0.32
25 AT1G32040 transposable element gene 0.67 0.32 -0.33
26 AT1G17230 Leucine-rich receptor-like protein kinase family protein 0.67 0.3 -0.3
27 AT3G27320 alpha/beta-Hydrolases superfamily protein 0.67 0.31 -0.32
28 AT2G01300 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT1G15010.1); Has 73 Blast hits
to 73 proteins in 12 species: Archae - 0; Bacteria - 0;
Metazoa - 0; Fungi - 0; Plants - 73; Viruses - 0; Other
Eukaryotes - 0 (source: NCBI BLink).		 -0.67 0.32 -0.29
29 AT1G03770 RING 1B ARABIDOPSIS THALIANA RING 1B, RING
1B		 -0.67 0.33 -0.3
30 AT2G29900 Presenilin-2 Presenilin-2 0.67 0.33 -0.3
31 AT1G74720 C2 calcium/lipid-binding plant phosphoribosyltransferase
family protein		 QUIRKY 0.67 0.31 -0.3
32 AT2G10400 transposable element gene 0.67 0.33 -0.33
33 AT4G35880 Eukaryotic aspartyl protease family protein 0.67 0.31 -0.3
34 AT2G22760 basic helix-loop-helix (bHLH) DNA-binding superfamily
protein		 -0.67 0.3 -0.31
35 AT5G64640 Plant invertase/pectin methylesterase inhibitor superfamily 0.66 0.32 -0.3
36 AT1G66160 CYS, MET, PRO, and GLY protein 1 ATCMPG1, CYS, MET, PRO, and GLY
protein 1		 -0.66 0.31 -0.34
37 AT4G34680 GATA transcription factor 3 GATA transcription factor 3 0.66 0.31 -0.32
38 AT5G09320 Vacuolar sorting protein 9 (VPS9) domain VPS9B 0.66 0.31 -0.3
39 AT3G11340 UDP-Glycosyltransferase superfamily protein UDP-dependent glycosyltransferase
76B1		 -0.66 0.3 -0.3
40 AT2G45930 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
mitochondrion; BEST Arabidopsis thaliana protein match is:
unknown protein (TAIR:AT4G16090.1); Has 161 Blast hits to
161 proteins in 2 species: Archae - 0; Bacteria - 0;
Metazoa - 0; Fungi - 0; Plants - 161; Viruses - 0; Other
Eukaryotes - 0 (source: NCBI BLink).		 -0.66 0.33 -0.31
41 AT5G23830 MD-2-related lipid recognition domain-containing protein -0.65 0.3 -0.3
42 AT1G05710 basic helix-loop-helix (bHLH) DNA-binding superfamily
protein		 -0.65 0.29 -0.31
43 AT1G60060 Serine/threonine-protein kinase WNK (With No
Lysine)-related		 0.65 0.32 -0.34
44 AT4G37470 alpha/beta-Hydrolases superfamily protein 0.65 0.34 -0.31
45 AT1G32680 transposable element gene 0.65 0.32 -0.32
46 AT2G32020 Acyl-CoA N-acyltransferases (NAT) superfamily protein -0.64 0.3 -0.29
47 AT5G18760 RING/U-box superfamily protein 0.64 0.3 -0.33
48 AT3G59810 Small nuclear ribonucleoprotein family protein 0.64 0.29 -0.33
49 AT4G25250 Plant invertase/pectin methylesterase inhibitor superfamily
protein		 -0.64 0.32 -0.31
50 AT2G35930 plant U-box 23 plant U-box 23 -0.63 0.29 -0.3
51 AT4G30280 xyloglucan endotransglucosylase/hydrolase 18 XYLOGLUCAN
ENDOTRANSGLUCOSYLASE/HYDROLASE 18,
xyloglucan
endotransglucosylase/hydrolase 18		 -0.63 0.31 -0.3
52 AT5G48010 thalianol synthase 1 Arabidopsis thaliana thalianol
synthase 1, THALIANOL SYNTHASE,
thalianol synthase 1		 -0.63 0.31 -0.33
53 AT5G20550 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase
superfamily protein		 -0.63 0.31 -0.31
54 AT5G48000 cytochrome P450, family 708, subfamily A, polypeptide 2 CYTOCHROME P450, FAMILY 708,
SUBFAMILY A, POLYPEPTIDE 2,
cytochrome P450, family 708,
subfamily A, polypeptide 2,
THALIANOL HYDROXYLASE, THALIANOL
HYDROXYLASE 1		 -0.62 0.3 -0.29
55 AT3G25655 inflorescence deficient in abscission (IDA)-like 1 inflorescence deficient in
abscission (IDA)-like 1		 -0.62 0.32 -0.33
56 AT3G62720 xylosyltransferase 1 ATXT1, xylosyltransferase 1, XYG
XYLOSYLTRANSFERASE 1		 -0.62 0.29 -0.29
57 AT5G47990 cytochrome P450, family 705, subfamily A, polypeptide 5 cytochrome P450, family 705,
subfamily A, polypeptide 5,
THALIAN-DIOL DESATURASE,
THALIAN-DIOL DESATURASE		 -0.62 0.32 -0.3
58 AT1G53830 pectin methylesterase 2 pectin methylesterase 2, pectin
methylesterase 2		 -0.62 0.3 -0.32
59 AT2G22770 basic helix-loop-helix (bHLH) DNA-binding superfamily
protein		 NAI1 -0.62 0.31 -0.33
60 AT1G66800 NAD(P)-binding Rossmann-fold superfamily protein -0.62 0.32 -0.32
61 AT2G34600 jasmonate-zim-domain protein 7 jasmonate-zim-domain protein 7,
TIFY5B		 -0.62 0.34 -0.3
62 AT2G41640 Glycosyltransferase family 61 protein -0.61 0.31 -0.31
63 AT4G27654 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
endomembrane system; EXPRESSED IN: 17 plant structures;
EXPRESSED DURING: 9 growth stages; Has 30201 Blast hits to
17322 proteins in 780 species: Archae - 12; Bacteria -
1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses
- 0; Other Eukaryotes - 2996 (source: NCBI BLink).		 -0.61 0.32 -0.32
64 AT5G52050 MATE efflux family protein -0.61 0.31 -0.32
65 AT5G11650 alpha/beta-Hydrolases superfamily protein -0.61 0.33 -0.31
66 AT5G04120 Phosphoglycerate mutase family protein -0.61 0.31 -0.31
67 AT5G37690 SGNH hydrolase-type esterase superfamily protein -0.61 0.3 -0.33
68 AT1G32920 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: response to wounding; LOCATED IN: endomembrane
system; EXPRESSED IN: 23 plant structures; EXPRESSED
DURING: 13 growth stages; BEST Arabidopsis thaliana protein
match is: unknown protein (TAIR:AT1G32928.1); Has 42 Blast
hits to 42 proteins in 8 species: Archae - 0; Bacteria - 0;
Metazoa - 0; Fungi - 0; Plants - 42; Viruses - 0; Other
Eukaryotes - 0 (source: NCBI BLink).		 -0.61 0.32 -0.32
69 AT4G37850 basic helix-loop-helix (bHLH) DNA-binding superfamily
protein		 -0.61 0.32 -0.31
70 AT2G42360 RING/U-box superfamily protein -0.6 0.34 -0.32
71 AT1G64590 NAD(P)-binding Rossmann-fold superfamily protein -0.6 0.32 -0.31
72 AT5G42380 calmodulin like 37 calmodulin like 37, CALMODULIN
LIKE 39		 -0.6 0.31 -0.31
73 AT5G45110 NPR1-like protein 3 ATNPR3, NPR1-like protein 3 -0.6 0.3 -0.32
74 AT4G21340 basic helix-loop-helix (bHLH) DNA-binding superfamily
protein		 B70 -0.6 0.32 -0.32
75 AT4G34410 redox responsive transcription factor 1 redox responsive transcription
factor 1		 -0.59 0.28 -0.3
76 AT5G63690 Nucleic acid-binding, OB-fold-like protein -0.59 0.33 -0.29
77 AT5G05980 DHFS-FPGS homolog B DHFS-FPGS homolog B, DHFS-FPGS
homolog B, folylpolyglutamate
synthetase 1		 -0.59 0.31 -0.36
Metabolite information
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  CID Metabolite name Pathway Information Correlation link
Compound name Stereochemistry Aracyc name pcc 2.5% 97.5% PPI
78 C0134 Kaempferol-7-O-neohesperidoside - - - 0.77 0.47 -0.43
79 C0135 Kaempferol-hexosyl-dirhamnoside - - - -0.76 0.48 -0.43
80 C0008 γ-Aminobutyric acid - 4-Aminobutyrate glutamate degradation IV,
4-aminobutyrate degradation IV,
putrescine degradation IV 		-0.62 0.31 -0.32 C0008