AT4G09110 : -
Query Information
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AGICode AT4G09110
Description RING/U-box superfamily protein
Gene information
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  Gene Code Description / Information Gene name Correlation link
pcc 2.5% 97.5% PPI
1 AT4G09110 RING/U-box superfamily protein 1 0.29 -0.31
2 AT2G06230 transposable element gene 0.69 0.32 -0.3
3 AT5G27940 WPP domain protein 3 WPP domain protein 3 0.67 0.32 -0.32
4 AT4G24400 CBL-interacting protein kinase 8 ATCIPK8, CBL-interacting protein
kinase 8, PROTEIN KINASE 11,
SNF1-RELATED PROTEIN KINASE 3.13		 -0.67 0.31 -0.33
5 AT1G48180 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT1G51670.1); Has 39 Blast hits
to 39 proteins in 2 species: Archae - 0; Bacteria - 0;
Metazoa - 0; Fungi - 0; Plants - 39; Viruses - 0; Other
Eukaryotes - 0 (source: NCBI BLink).		 0.67 0.32 -0.31
6 AT1G62085 Mitochondrial transcription termination factor family
protein		 0.66 0.33 -0.34
7 AT3G25500 formin homology 1 formin homology 1, AHF1,
ARABIDOPSIS THALIANA FORMIN
HOMOLOGY 1, FORMIN HOMOLOGY 1		 0.66 0.32 -0.32
8 AT1G52600 Peptidase S24/S26A/S26B/S26C family protein -0.66 0.33 -0.31
9 AT5G55370 MBOAT (membrane bound O-acyl transferase) family protein 0.65 0.29 -0.33
10 AT4G21450 PapD-like superfamily protein -0.65 0.3 -0.31
11 AT4G17483 alpha/beta-Hydrolases superfamily protein -0.65 0.32 -0.3
12 AT1G04960 Protein of unknown function (DUF1664) -0.65 0.3 -0.32
13 AT2G38710 AMMECR1 family -0.65 0.31 -0.29
14 AT1G63480 AT hook motif DNA-binding family protein 0.64 0.31 -0.31
15 AT4G34330 Protein of unknown function (DUF677) 0.63 0.3 -0.33
16 AT5G65330 AGAMOUS-like 78 AGAMOUS-like 78 0.63 0.31 -0.29
17 AT1G12775 Pentatricopeptide repeat (PPR) superfamily protein 0.62 0.3 -0.31
18 AT5G22380 NAC domain containing protein 90 NAC domain containing protein 90,
NAC domain containing protein 90		 0.62 0.33 -0.31
19 AT4G04930 fatty acid desaturase family protein DES-1-LIKE 0.62 0.31 -0.34
20 AT4G29560 CONTAINS InterPro DOMAIN/s: Fanconi Anaemia group E
protein, C-terminal (InterPro:IPR021025); Has 41 Blast hits
to 41 proteins in 17 species: Archae - 0; Bacteria - 0;
Metazoa - 10; Fungi - 0; Plants - 27; Viruses - 0; Other
Eukaryotes - 4 (source: NCBI BLink).		 0.62 0.27 -0.32
21 AT3G61170 Tetratricopeptide repeat (TPR)-like superfamily protein 0.61 0.29 -0.32
22 AT2G25070 Protein phosphatase 2C family protein -0.61 0.33 -0.3
23 AT2G10390 transposable element gene 0.6 0.31 -0.3
24 AT4G36790 Major facilitator superfamily protein -0.6 0.31 -0.34
25 AT5G53470 acyl-CoA binding protein 1 ACYL-COA BINDING PROTEIN, acyl-CoA
binding protein 1		 -0.6 0.32 -0.32
26 AT1G21090 Cupredoxin superfamily protein 0.6 0.33 -0.29
27 AT5G17530 phosphoglucosamine mutase family protein -0.6 0.34 -0.3
28 AT5G05930 guanylyl cyclase 1 ARABIDOPSIS GUANYLYL CYCLASE 1,
guanylyl cyclase 1		 -0.6 0.32 -0.31
29 AT4G00280 BEST Arabidopsis thaliana protein match is: Leucine-rich
repeat transmembrane protein kinase protein
(TAIR:AT2G19210.1); Has 19 Blast hits to 19 proteins in 2
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 19; Viruses - 0; Other Eukaryotes - 0 (source:
NCBI BLink).		 0.6 0.33 -0.33
30 AT2G25560 DNAJ heat shock N-terminal domain-containing protein 0.59 0.33 -0.3
31 AT3G43650 transposable element gene 0.59 0.33 -0.32
32 AT2G47160 HCO3- transporter family AtBOR1, REQUIRES HIGH BORON 1 0.59 0.31 -0.31
33 AT4G36400 FAD-linked oxidases family protein D-2-hydroxyglutarate dehydrogenase -0.59 0.31 -0.33
34 AT2G46340 SPA (suppressor of phyA-105) protein family SUPPRESSOR OF PHYA-105 1 -0.58 0.31 -0.31
35 AT1G11880 transferases, transferring hexosyl groups -0.58 0.31 -0.32
36 AT2G34100 unknown protein; Has 35333 Blast hits to 34131 proteins in
2444 species: Archae - 798; Bacteria - 22429; Metazoa -
974; Fungi - 991; Plants - 531; Viruses - 0; Other
Eukaryotes - 9610 (source: NCBI BLink).		 0.58 0.31 -0.33
37 AT2G23080 Protein kinase superfamily protein casein kinase II, alpha chain 3 -0.58 0.31 -0.3
38 AT1G78060 Glycosyl hydrolase family protein 0.58 0.32 -0.31
39 AT3G56820 unknown protein; Has 34 Blast hits to 34 proteins in 13
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 27; Viruses - 0; Other Eukaryotes - 7 (source:
NCBI BLink).		 -0.57 0.29 -0.32
40 AT2G22830 squalene epoxidase 2 squalene epoxidase 2 0.57 0.3 -0.32
41 AT1G05900 endonuclease III 2 ATNTH2, endonuclease III 2 -0.57 0.3 -0.31
42 AT5G07910 Leucine-rich repeat (LRR) family protein -0.56 0.31 -0.33
43 AT1G10750 Protein of Unknown Function (DUF239) 0.56 0.32 -0.3
44 AT3G57060 binding 0.56 0.32 -0.31
45 AT3G63350 winged-helix DNA-binding transcription factor family
protein		 AT-HSFA7B, HEAT SHOCK
TRANSCRIPTION FACTOR A7B		 0.56 0.32 -0.31
46 AT3G17110 pseudogene, glycine-rich protein -0.55 0.32 -0.33
47 AT3G28780 Protein of unknown function (DUF1216) 0.55 0.29 -0.32
48 AT5G46100 Pentatricopeptide repeat (PPR) superfamily protein 0.55 0.34 -0.33
49 AT2G06490 transposable element gene 0.55 0.3 -0.33
50 AT1G26590 C2H2-like zinc finger protein 0.55 0.3 -0.3
51 AT1G11160 Transducin/WD40 repeat-like superfamily protein 0.55 0.3 -0.32
52 AT4G03780 transposable element gene -0.55 0.32 -0.34
53 AT1G04150 C2 calcium/lipid-binding plant phosphoribosyltransferase
family protein		 0.55 0.31 -0.32
54 AT5G13530 protein kinases;ubiquitin-protein ligases KEEP ON GOING -0.55 0.32 -0.32
55 AT2G23700 Protein of unknown function, DUF547 0.55 0.32 -0.3
56 AT1G73560 Bifunctional inhibitor/lipid-transfer protein/seed storage
2S albumin superfamily protein		 0.55 0.29 -0.29
57 AT1G03250 unknown protein; Has 89 Blast hits to 89 proteins in 31
species: Archae - 0; Bacteria - 0; Metazoa - 31; Fungi - 0;
Plants - 48; Viruses - 0; Other Eukaryotes - 10 (source:
NCBI BLink).		 -0.55 0.31 -0.32
58 AT1G79050 recA DNA recombination family protein -0.55 0.32 -0.3
59 AT1G42700 FUNCTIONS IN: molecular_function unknown; INVOLVED IN:
response to cold; LOCATED IN: nucleus; BEST Arabidopsis
thaliana protein match is: Plant transposase (Ptta/En/Spm
family) (TAIR:AT1G40087.1); Has 10 Blast hits to 10
proteins in 3 species: Archae - 0; Bacteria - 0; Metazoa -
0; Fungi - 0; Plants - 10; Viruses - 0; Other Eukaryotes -
0 (source: NCBI BLink).		 0.55 0.32 -0.33
60 AT3G03860 APR-like 5 APR-like 5, APR-like 5 -0.54 0.32 -0.33
61 AT2G39550 Prenyltransferase family protein GERANYLGERANYLTRANSFERASE-I BETA
SUBUNIT, GGB, PGGT-I		 -0.54 0.29 -0.32
62 AT1G19580 gamma carbonic anhydrase 1 gamma carbonic anhydrase 1 -0.54 0.3 -0.33
63 AT5G57310 unknown protein; Has 1 Blast hits to 1 proteins in 1
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 1; Viruses - 0; Other Eukaryotes - 0 (source: NCBI
BLink).		 0.54 0.32 -0.32
64 AT5G29020 transposable element gene -0.54 0.32 -0.3
65 AT2G01940 C2H2-like zinc finger protein ARABIDOPSIS THALIANA
INDETERMINATE(ID)-DOMAIN 15, SHOOT
GRAVITROPISM 5		 0.54 0.29 -0.3
66 AT5G41480 Folylpolyglutamate synthetase family protein A. THALIANA DHFS-FPGS HOMOLOG A,
DHFS-FPGS HOMOLOG A, EMBRYO
DEFECTIVE 9, GLOBULAR ARREST1		 -0.53 0.31 -0.31
67 AT2G13100 Major facilitator superfamily protein glycerol-3-phosphate permease 5,
glycerol-3-phosphate permease 5		 -0.53 0.29 -0.32
68 AT2G35670 VEFS-Box of polycomb protein FERTILIZATION-INDEPENDENT
ENDOSPERM 2, FERTILIZATION
INDEPENDENT SEED 2		 0.53 0.33 -0.31
69 AT1G70570 anthranilate phosphoribosyltransferase, putative -0.53 0.3 -0.29
70 AT2G22750 basic helix-loop-helix (bHLH) DNA-binding superfamily
protein		 -0.53 0.31 -0.3
71 AT3G26010 Galactose oxidase/kelch repeat superfamily protein 0.53 0.31 -0.3
72 AT4G05230 Ubiquitin-like superfamily protein 0.53 0.32 -0.32
73 AT2G40230 HXXXD-type acyl-transferase family protein 0.52 0.3 -0.3
74 AT5G11180 glutamate receptor 2.6 ARABIDOPSIS THALIANA GLUTAMATE
RECEPTOR 2.6, glutamate receptor
2.6		 0.52 0.32 -0.31
75 AT1G52520 FAR1-related sequence 6 FAR1-related sequence 6 0.52 0.3 -0.31
76 AT2G34890 CTP synthase family protein 0.51 0.33 -0.31
77 AT5G12910 Histone superfamily protein 0.51 0.31 -0.3
78 AT2G44250 Protein of Unknown Function (DUF239) 0.51 0.29 -0.31
79 AT5G19560 ROP uanine nucleotide exchange factor 10 ARABIDOPSIS THALIANA ROP UANINE
NUCLEOTIDE EXCHANGE FACTOR 10, ROP
uanine nucleotide exchange factor
10		 0.51 0.3 -0.31
80 AT4G36290 compromised recognition of TCV 1 compromised recognition of TCV 1 0.51 0.3 -0.3
81 AT4G01380 plastocyanin-like domain-containing protein 0.51 0.3 -0.33
Metabolite information
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  CID Metabolite name Pathway Information Correlation link
Compound name Stereochemistry Aracyc name pcc 2.5% 97.5% PPI
82 C0207 Phosphatidylglycerol-34:5 - - - -0.72 0.46 -0.45
83 C0016 S-Adenosylmethionine S-Adenosyl-L-methionine S-Adenosyl-L-methionine ethylene biosynthesis I (plants),
scopoletin biosynthesis,
quercetinsulphates biosynthesis,
siroheme biosynthesis,
gibberellin inactivation II (methylation),
suberin biosynthesis,
volatile benzenoid biosynthesis I (ester formation),
S-adenosyl-L-methionine cycle II,
methylhalides biosynthesis (plants),
S-methylmethionine cycle,
ubiquinol-9 biosynthesis (eukaryotic),
nicotianamine biosynthesis,
methionine biosynthesis II,
spermine biosynthesis,
choline biosynthesis II,
diphthamide biosynthesis,
homogalacturonan biosynthesis,
phosphatidylcholine biosynthesis II,
methylquercetin biosynthesis,
plastoquinol biosynthesis,
chlorophyllide a biosynthesis I,
ferulate and sinapate biosynthesis,
ubiquinol-10 biosynthesis (eukaryotic),
phenylpropanoid biosynthesis,
free phenylpropanoid acid biosynthesis,
seleno-amino acid detoxification and volatilization I,
plant sterol biosynthesis,
lipoate biosynthesis and incorporation I,
methyl indole-3-acetate interconversion,
cyclopropane and cyclopropene fatty acid biosynthesis,
spermidine biosynthesis I,
thiamine biosynthesis II,
methionine salvage pathway,
spermidine hydroxycinnamic acid conjugates biosynthesis,
simple coumarins biosynthesis,
phosphatidylcholine biosynthesis IV,
glutathione-mediated detoxification II,
S-adenosyl-L-methionine biosynthesis,
methionine degradation I (to homocysteine),
phosphatidylcholine biosynthesis III,
phylloquinol biosynthesis,
choline biosynthesis I,
biotin biosynthesis II,
vitamin E biosynthesis 		0.68 0.49 -0.46 C0016
84 C0147 Mannose D-Mannose D-Mannose mannose degradation,
mannitol degradation II 		-0.56 0.3 -0.31 C0147