AT4G09290 : -
Query Information
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AGICode AT4G09290
Description transposable element gene
Gene information
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  Gene Code Description / Information Gene name Correlation link
pcc 2.5% 97.5% PPI
1 AT4G09290 transposable element gene 1 0.31 -0.32
2 AT1G71470 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT3G22090.1); Has 11 Blast hits
to 11 proteins in 3 species: Archae - 0; Bacteria - 0;
Metazoa - 0; Fungi - 0; Plants - 10; Viruses - 0; Other
Eukaryotes - 1 (source: NCBI BLink).		 0.79 0.33 -0.31
3 AT4G29090 Ribonuclease H-like superfamily protein 0.75 0.32 -0.32
4 ATMG01020 hypothetical protein ORF153B 0.71 0.3 -0.33
5 AT4G16640 Matrixin family protein -0.69 0.31 -0.3
6 AT1G28430 cytochrome P450, family 705, subfamily A, polypeptide 24 cytochrome P450, family 705,
subfamily A, polypeptide 24		 0.66 0.32 -0.32
7 AT1G30795 Glycine-rich protein family 0.66 0.32 -0.33
8 AT1G54420 unknown protein; Has 9 Blast hits to 7 proteins in 2
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 3; Viruses - 0; Other Eukaryotes - 6 (source: NCBI
BLink).		 -0.66 0.32 -0.32
9 AT1G59650 Protein of unknown function (DUF1336) CW14 0.65 0.33 -0.31
10 AT2G40740 WRKY DNA-binding protein 55 WRKY DNA-BINDING PROTEIN 55, WRKY
DNA-binding protein 55		 0.64 0.33 -0.3
11 AT5G40680 Galactose oxidase/kelch repeat superfamily protein 0.64 0.31 -0.32
12 AT3G16550 DEGP protease 12 DEGP protease 12 0.63 0.33 -0.34
13 AT5G67550 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
endomembrane system; EXPRESSED IN: flower; EXPRESSED
DURING: 4 anthesis; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT1G71110.1); Has 161 Blast hits
to 154 proteins in 16 species: Archae - 0; Bacteria - 0;
Metazoa - 0; Fungi - 0; Plants - 161; Viruses - 0; Other
Eukaryotes - 0 (source: NCBI BLink).		 0.63 0.31 -0.29
14 AT1G56030 RING/U-box superfamily protein -0.6 0.31 -0.32
15 AT1G29110 Cysteine proteinases superfamily protein 0.6 0.33 -0.33
16 AT1G42610 transposable element gene 0.6 0.31 -0.31
17 AT4G39370 ubiquitin-specific protease 27 ubiquitin-specific protease 27 -0.6 0.31 -0.32
18 AT4G10280 RmlC-like cupins superfamily protein -0.59 0.3 -0.3
19 AT1G60530 Dynamin related protein 4A Dynamin related protein 4A -0.59 0.31 -0.3
20 AT2G21920 F-box associated ubiquitination effector family protein -0.59 0.32 -0.32
21 AT2G41370 Ankyrin repeat family protein / BTB/POZ domain-containing
protein		 BLADE ON PETIOLE2 -0.59 0.35 -0.31
22 AT3G43690 transposable element gene -0.59 0.33 -0.32
23 AT2G15600 transposable element gene -0.58 0.34 -0.34
24 AT3G06160 AP2/B3-like transcriptional factor family protein -0.58 0.34 -0.32
25 AT2G06950 transposable element gene 0.58 0.33 -0.31
26 AT1G32180 cellulose synthase-like D6 cellulose synthase-like D6,
CELLULOSE SYNTHASE LIKE D6,
cellulose synthase-like D6		 -0.58 0.31 -0.32
27 AT1G01980 FAD-binding Berberine family protein -0.58 0.33 -0.3
28 AT1G23240 Caleosin-related family protein 0.58 0.31 -0.33
29 AT2G31690 alpha/beta-Hydrolases superfamily protein 0.57 0.31 -0.31
30 AT2G02410 unknown protein; CONTAINS InterPro DOMAIN/s: Protein of
unknown function DUF901 (InterPro:IPR010298); Has 1151
Blast hits to 1151 proteins in 597 species: Archae - 0;
Bacteria - 1105; Metazoa - 0; Fungi - 0; Plants - 42;
Viruses - 0; Other Eukaryotes - 4 (source: NCBI BLink).		 -0.57 0.32 -0.3
31 AT5G27810 MADS-box transcription factor family protein -0.57 0.3 -0.3
32 AT1G13290 C2H2-like zinc finger protein DEFECTIVELY ORGANIZED TRIBUTARIES
5, WIP domain protein 6		 0.57 0.32 -0.31
33 AT5G62320 myb domain protein 99 myb domain protein 99, ATMYBCU15,
myb domain protein 99		 0.56 0.31 -0.31
34 AT1G24650 Leucine-rich repeat protein kinase family protein 0.56 0.29 -0.32
35 ATMG01200 hypothetical protein ORF294 0.56 0.32 -0.32
36 AT5G10230 annexin 7 ANNEXIN 7, annexin 7 -0.56 0.31 -0.32
37 AT1G29490 SAUR-like auxin-responsive protein family -0.56 0.31 -0.3
38 AT1G31220 Formyl transferase 0.56 0.33 -0.3
39 AT3G50990 Peroxidase superfamily protein 0.56 0.33 -0.3
40 ATMG00010 hypothetical protein ORF153A 0.56 0.32 -0.31
41 AT3G62180 Plant invertase/pectin methylesterase inhibitor superfamily
protein		 -0.56 0.3 -0.32
42 AT5G66340 unknown protein; Has 1807 Blast hits to 1807 proteins in
277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi
- 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339
(source: NCBI BLink).		 0.56 0.3 -0.31
43 AT3G30150 transposable element gene -0.56 0.32 -0.3
44 AT1G31960 unknown protein; Has 4 Blast hits to 4 proteins in 2
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 4; Viruses - 0; Other Eukaryotes - 0 (source: NCBI
BLink).		 -0.55 0.3 -0.31
45 AT2G33320 Calcium-dependent lipid-binding (CaLB domain) family
protein		 0.55 0.31 -0.33
46 AT4G13230 Late embryogenesis abundant protein (LEA) family protein -0.55 0.32 -0.32
47 AT4G19570 Chaperone DnaJ-domain superfamily protein -0.55 0.33 -0.3
48 AT3G13090 multidrug resistance-associated protein 8 ATP-binding cassette C6, multidrug
resistance-associated protein 8,
multidrug resistance-associated
protein 8		 0.55 0.33 -0.3
49 AT2G32460 myb domain protein 101 ARABIDOPSIS THALIANA MYB 1,
ATMYB101, myb domain protein 101		 0.55 0.3 -0.31
50 AT3G24890 vesicle-associated membrane protein 728 ATVAMP728, vesicle-associated
membrane protein 728		 -0.55 0.31 -0.32
51 AT4G03170 AP2/B3-like transcriptional factor family protein 0.54 0.31 -0.31
52 AT3G32040 Terpenoid synthases superfamily protein -0.54 0.33 -0.29
53 AT5G18810 SC35-like splicing factor 28 SC35-like splicing factor 28,
SC35-like splicing factor 28		 -0.54 0.3 -0.31
54 AT2G14210 AGAMOUS-like 44 AGAMOUS-like 44, ARABIDOPSIS
NITRATE REGULATED 1		 0.54 0.32 -0.31
55 AT1G32600 F-box associated ubiquitination effector family protein -0.54 0.31 -0.29
56 AT4G18400 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED
DURING: 13 growth stages; Has 30201 Blast hits to 17322
proteins in 780 species: Archae - 12; Bacteria - 1396;
Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0;
Other Eukaryotes - 2996 (source: NCBI BLink).		 -0.54 0.33 -0.31
57 AT3G14340 unknown protein; Has 1 Blast hits to 1 proteins in 1
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 1; Viruses - 0; Other Eukaryotes - 0 (source: NCBI
BLink).		 0.54 0.31 -0.33
58 AT5G57830 Protein of unknown function, DUF593 -0.53 0.33 -0.3
59 AT1G68700 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT1G26140.1); Has 14 Blast hits
to 14 proteins in 4 species: Archae - 0; Bacteria - 0;
Metazoa - 0; Fungi - 0; Plants - 14; Viruses - 0; Other
Eukaryotes - 0 (source: NCBI BLink).		 0.53 0.32 -0.29
60 AT5G34895 transposable element gene -0.53 0.3 -0.31
61 AT1G66450 Cysteine/Histidine-rich C1 domain family protein 0.53 0.31 -0.31
62 AT2G28350 auxin response factor 10 auxin response factor 10 -0.53 0.3 -0.29
63 AT1G54170 CTC-interacting domain 3 CTC-interacting domain 3 -0.53 0.32 -0.3
64 AT2G19960 hAT family dimerisation domain 0.53 0.33 -0.31
65 AT4G14610 pseudogene, disease resistance protein (CC-NBS-LRR class),
putative, domain signature CC-NBS-LRR exists, suggestive of
a disease resistance protein.; blastp match of 45% identity
and 2.2e-162 P-value to
GP|24461866|gb|AAN62353.1|AF506028_20|AF506028 NBS-LRR type
disease resistance protein {Poncirus trifoliata}		 -0.53 0.3 -0.32
66 AT1G21580 Zinc finger C-x8-C-x5-C-x3-H type family protein 0.53 0.31 -0.3
67 AT3G04390 Aldehyde oxidase/xanthine dehydrogenase, molybdopterin
binding protein		 -0.53 0.32 -0.33
68 AT5G64160 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
cellular_component unknown; EXPRESSED IN: 24 plant
structures; EXPRESSED DURING: 15 growth stages; Has 30201
Blast hits to 17322 proteins in 780 species: Archae - 12;
Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants -
5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI
BLink).		 -0.53 0.31 -0.3
69 AT2G25230 myb domain protein 100 myb domain protein 100, myb domain
protein 100		 -0.52 0.34 -0.3
70 AT1G05360 BEST Arabidopsis thaliana protein match is: SNARE
associated Golgi protein family (TAIR:AT4G14950.1); Has 332
Blast hits to 326 proteins in 115 species: Archae - 0;
Bacteria - 11; Metazoa - 174; Fungi - 0; Plants - 74;
Viruses - 0; Other Eukaryotes - 73 (source: NCBI BLink).		 Killing Me Slowly 2 -0.52 0.31 -0.34
71 AT3G20180 Copper transport protein family -0.52 0.33 -0.33
72 AT2G38570 CONTAINS InterPro DOMAIN/s: PRC-barrel-like
(InterPro:IPR011033); Has 300 Blast hits to 300 proteins in
81 species: Archae - 0; Bacteria - 135; Metazoa - 0; Fungi
- 0; Plants - 37; Viruses - 0; Other Eukaryotes - 128
(source: NCBI BLink).		 -0.52 0.34 -0.31
73 AT3G20030 F-box and associated interaction domains-containing protein -0.52 0.31 -0.31
74 AT5G18990 Pectin lyase-like superfamily protein -0.52 0.3 -0.3
75 AT1G49220 RING/U-box superfamily protein -0.52 0.32 -0.32
76 AT4G17040 CLP protease R subunit 4 CLP protease R subunit 4, happy on
norflurazon 5		 -0.52 0.32 -0.32
77 AT2G04845 Acyl-CoA N-acyltransferases (NAT) superfamily protein -0.52 0.32 -0.33
78 AT1G04380 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase
superfamily protein		 0.52 0.3 -0.33
79 AT5G28440 unknown protein 0.52 0.32 -0.29
80 AT3G55000 tonneau family protein TONNEAU 1, TONNEAU 1A -0.52 0.3 -0.3
81 AT1G61680 terpene synthase 14 TERPENE SYNTHASE 14, terpene
synthase 14		 -0.51 0.3 -0.32
82 AT3G29775 transposable element gene 0.51 0.31 -0.33
83 AT4G00720 shaggy-like protein kinase 32 SHAGGY-LIKE PROTEIN KINASE THETA,
shaggy-like protein kinase 32,
shaggy-like protein kinase 32		 0.51 0.31 -0.3
84 AT3G14640 cytochrome P450, family 72, subfamily A, polypeptide 10 cytochrome P450, family 72,
subfamily A, polypeptide 10		 0.51 0.33 -0.31
85 AT3G60410 Protein of unknown function (DUF1639) -0.51 0.32 -0.32
86 AT2G04560 transferases, transferring glycosyl groups AtLpxB, lipid X B -0.51 0.31 -0.32
87 AT1G67070 Mannose-6-phosphate isomerase, type I DARK INDUCIBLE 9, PHOSPHOMANNOSE
ISOMERASE 2		 0.51 0.33 -0.32
88 AT5G63720 kokopelli KOKOPELLI -0.51 0.32 -0.31
89 AT3G27100 FUNCTIONS IN: molecular_function unknown; INVOLVED IN:
biological_process unknown; LOCATED IN: chloroplast
envelope; EXPRESSED IN: 23 plant structures; EXPRESSED
DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s:
Transcription factor, enhancer of yellow 2
(InterPro:IPR018783); Has 288 Blast hits to 288 proteins in
94 species: Archae - 0; Bacteria - 0; Metazoa - 197; Fungi
- 20; Plants - 51; Viruses - 0; Other Eukaryotes - 20
(source: NCBI BLink).		 -0.51 0.32 -0.31
90 AT2G07380 transposable element gene 0.51 0.34 -0.32
91 AT1G27550 F-box family protein -0.51 0.33 -0.34
92 AT3G57140 sugar-dependent 1-like sugar-dependent 1-like 0.5 0.31 -0.33
93 AT2G34890 CTP synthase family protein 0.5 0.31 -0.3
94 AT5G05290 expansin A2 ATEXP2, expansin A2, ATHEXP ALPHA
1.12, EXPANSIN 2, expansin A2		 0.5 0.33 -0.34
95 AT1G02950 glutathione S-transferase F4 glutathione S-transferase F4,
GLUTATHIONE S-TRANSFERASE 31,
glutathione S-transferase F4		 -0.5 0.31 -0.3
96 AT2G16840 transposable element gene -0.5 0.35 -0.31
97 AT5G47790 SMAD/FHA domain-containing protein -0.5 0.31 -0.29
98 AT4G17785 myb domain protein 39 myb domain protein 39 -0.5 0.34 -0.32
99 AT2G39640 glycosyl hydrolase family 17 protein 0.5 0.32 -0.31
100 AT3G43970 unknown protein; BEST Arabidopsis thaliana protein match
is: Protein of unknown function (DUF295)
(TAIR:AT5G53240.1); Has 56 Blast hits to 56 proteins in 2
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 56; Viruses - 0; Other Eukaryotes - 0 (source:
NCBI BLink).		 0.5 0.32 -0.31
101 AT1G18310 glycosyl hydrolase family 81 protein -0.5 0.31 -0.31
102 AT4G03660 transposable element gene -0.5 0.3 -0.31
103 AT5G52130 unknown protein; Has 10 Blast hits to 10 proteins in 3
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 10; Viruses - 0; Other Eukaryotes - 0 (source:
NCBI BLink).		 -0.5 0.33 -0.32
104 AT5G66010 RNA-binding (RRM/RBD/RNP motifs) family protein -0.49 0.34 -0.32
105 AT3G47250 Plant protein of unknown function (DUF247) -0.49 0.32 -0.28
106 AT1G52830 indole-3-acetic acid 6 indole-3-acetic acid 6, SHORT
HYPOCOTYL 1		 -0.49 0.32 -0.3
107 AT2G11235 transposable element gene -0.49 0.32 -0.31
108 AT1G15530 Concanavalin A-like lectin protein kinase family protein -0.49 0.35 -0.28
109 AT1G09370 Plant invertase/pectin methylesterase inhibitor superfamily
protein		 0.49 0.32 -0.32
110 AT5G03020 Galactose oxidase/kelch repeat superfamily protein -0.49 0.28 -0.3
111 AT4G26050 plant intracellular ras group-related LRR 8 plant intracellular ras
group-related LRR 8		 0.49 0.31 -0.32
112 AT5G56330 alpha carbonic anhydrase 8 alpha carbonic anhydrase 8, A.
THALIANA ALPHA CARBONIC ANHYDRASE
8		 -0.49 0.31 -0.33
Metabolite information
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  CID Metabolite name Pathway Information Correlation link
Compound name Stereochemistry Aracyc name pcc 2.5% 97.5% PPI
113 C0228 Ribose-5-phosphate D-Ribose-5-phosphate D-Ribose-5-phosphate PRPP biosynthesis I,
Calvin-Benson-Bassham cycle,
trans-zeatin biosynthesis,
pentose phosphate pathway (non-oxidative branch),
pyridine nucleotide cycling (plants),
Rubisco shunt,
ribose degradation,
pyridoxal 5'-phosphate biosynthesis II 		-0.75 0.44 -0.47 C0228
114 C0131 Kaempferol-3-O-β-glucopyranoside-7-O-α-rhamnopyranoside Kaempferol-3-O-β-D-glucopyranoside-7-O-α-L-rhamnopyranoside Kaempferol-3-glucoside-7-rhamnoside kaempferol glucoside biosynthesis (Arabidopsis) 0.71 0.45 -0.45 C0131
115 C0223 Quercetin-3-O-β-glucopyranoside-7-O-α-rhamnospyranoide - Quercetin-3-O-glucoside-7-O-rhamnoside quercetin glucoside biosynthesis (Arabidopsis) 0.51 0.32 -0.3 C0223