AT4G09340 : -
Query Information
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AGICode AT4G09340
Description SPla/RYanodine receptor (SPRY) domain-containing protein
Gene information
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  Gene Code Description / Information Gene name Correlation link
pcc 2.5% 97.5% PPI
1 AT4G09340 SPla/RYanodine receptor (SPRY) domain-containing protein 1 0.31 -0.31
2 AT4G29220 phosphofructokinase 1 phosphofructokinase 1 0.78 0.32 -0.31
3 AT3G19900 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
chloroplast; EXPRESSED IN: 23 plant structures; EXPRESSED
DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s:
Protein of unknown function DUF3067 (InterPro:IPR021420);
Has 276 Blast hits to 276 proteins in 83 species: Archae -
0; Bacteria - 112; Metazoa - 0; Fungi - 2; Plants - 59;
Viruses - 0; Other Eukaryotes - 103 (source: NCBI BLink).		 0.77 0.34 -0.34
4 AT1G15480 Tetratricopeptide repeat (TPR)-like superfamily protein -0.76 0.32 -0.31
5 AT4G29890 choline monooxygenase, putative (CMO-like) 0.75 0.29 -0.3
6 AT1G53280 Class I glutamine amidotransferase-like superfamily protein DJ-1 homolog B, DJ-1 homolog B 0.75 0.33 -0.31
7 AT3G16230 Predicted eukaryotic LigT 0.74 0.3 -0.31
8 AT1G31170 sulfiredoxin SULFIREDOXIN, sulfiredoxin 0.74 0.32 -0.29
9 AT3G56140 Protein of unknown function (DUF399 and DUF3411) 0.74 0.3 -0.31
10 AT3G27820 monodehydroascorbate reductase 4 MONODEHYDROASCORBATE REDUCTASE 4,
monodehydroascorbate reductase 4		 0.74 0.34 -0.32
11 AT5G14520 pescadillo-related -0.74 0.34 -0.3
12 AT5G11350 DNAse I-like superfamily protein 0.73 0.32 -0.32
13 AT2G35490 Plastid-lipid associated protein PAP / fibrillin family
protein		 0.73 0.32 -0.32
14 AT1G78680 gamma-glutamyl hydrolase 2 gamma-glutamyl hydrolase 2,
gamma-glutamyl hydrolase 2		 0.73 0.33 -0.33
15 AT1G17360 BEST Arabidopsis thaliana protein match is:
COP1-interacting protein-related (TAIR:AT1G72410.1); Has
9949 Blast hits to 7480 proteins in 576 species: Archae -
12; Bacteria - 1007; Metazoa - 3636; Fungi - 982; Plants -
444; Viruses - 50; Other Eukaryotes - 3818 (source: NCBI
BLink).		 0.73 0.31 -0.31
16 AT2G45990 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
chloroplast, chloroplast stroma; EXPRESSED IN: 22 plant
structures; EXPRESSED DURING: 13 growth stages; Has 312
Blast hits to 312 proteins in 90 species: Archae - 0;
Bacteria - 131; Metazoa - 0; Fungi - 0; Plants - 67;
Viruses - 0; Other Eukaryotes - 114 (source: NCBI BLink).		 0.73 0.33 -0.31
17 AT3G28270 Protein of unknown function (DUF677) 0.72 0.33 -0.36
18 AT4G37270 heavy metal atpase 1 ARABIDOPSIS THALIANA HEAVY METAL
ATPASE 1, heavy metal atpase 1		 0.72 0.31 -0.31
19 AT3G59090 CONTAINS InterPro DOMAIN/s: Protein of unknown function
DUF1084 (InterPro:IPR009457); BEST Arabidopsis thaliana
protein match is: tobamovirus multiplication 1
(TAIR:AT4G21790.1); Has 196 Blast hits to 195 proteins in
29 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi -
2; Plants - 188; Viruses - 0; Other Eukaryotes - 6 (source:
NCBI BLink).		 0.72 0.31 -0.33
20 AT3G60340 alpha/beta-Hydrolases superfamily protein 0.72 0.32 -0.35
21 AT3G12860 NOP56-like pre RNA processing ribonucleoprotein -0.72 0.32 -0.31
22 AT5G08180 Ribosomal protein L7Ae/L30e/S12e/Gadd45 family protein -0.72 0.3 -0.29
23 AT3G26000 Ribonuclease inhibitor 0.72 0.31 -0.31
24 AT2G46580 Pyridoxamine 5'-phosphate oxidase family protein 0.72 0.31 -0.31
25 AT3G02300 Regulator of chromosome condensation (RCC1) family protein 0.71 0.29 -0.32
26 AT3G26580 Tetratricopeptide repeat (TPR)-like superfamily protein 0.71 0.3 -0.33
27 AT4G35030 Protein kinase superfamily protein -0.71 0.3 -0.33
28 AT3G63520 carotenoid cleavage dioxygenase 1 CAROTENOID CLEAVAGE DIOXYGENASE 1,
ATNCED1, carotenoid cleavage
dioxygenase 1, NCED1		 0.71 0.32 -0.33
29 AT3G01200 PPDK regulatory protein 2 PPDK regulatory protein 2, PPDK
regulatory protein 2		 0.71 0.3 -0.33
30 AT2G23780 RING/U-box superfamily protein 0.71 0.34 -0.31
31 AT1G11720 starch synthase 3 starch synthase 3, starch synthase
3		 0.71 0.31 -0.31
32 AT3G28050 nodulin MtN21 /EamA-like transporter family protein 0.7 0.31 -0.3
33 AT1G02960 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT1G02965.1); Has 83 Blast hits
to 82 proteins in 37 species: Archae - 0; Bacteria - 2;
Metazoa - 20; Fungi - 7; Plants - 29; Viruses - 0; Other
Eukaryotes - 25 (source: NCBI BLink).		 0.7 0.32 -0.3
34 AT1G16060 ARIA-interacting double AP2 domain protein ARIA-interacting double AP2 domain
protein		 -0.7 0.33 -0.33
35 AT5G62440 Protein of unknown function (DUF3223) -0.7 0.31 -0.31
36 AT4G34360 S-adenosyl-L-methionine-dependent methyltransferases
superfamily protein		 -0.7 0.32 -0.31
37 AT5G62440 Protein of unknown function (DUF3223) -0.7 0.31 -0.31
38 AT4G02120 CTP synthase family protein 0.69 0.32 -0.35
39 AT3G25740 methionine aminopeptidase 1C methionine aminopeptidase 1C,
METHIONINE AMINOPEPTIDASE 1C		 0.69 0.3 -0.33
40 AT3G44280 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
endomembrane system; EXPRESSED IN: 24 plant structures;
EXPRESSED DURING: 15 growth stages; BEST Arabidopsis
thaliana protein match is: unknown protein
(TAIR:AT5G22280.1); Has 82 Blast hits to 82 proteins in 13
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 82; Viruses - 0; Other Eukaryotes - 0 (source:
NCBI BLink).		 0.69 0.33 -0.32
41 AT3G05060 NOP56-like pre RNA processing ribonucleoprotein -0.69 0.3 -0.31
42 AT3G01180 starch synthase 2 starch synthase 2, starch synthase
2		 0.69 0.31 -0.33
43 AT4G38060 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT5G65480.1); Has 63 Blast hits
to 63 proteins in 13 species: Archae - 0; Bacteria - 0;
Metazoa - 0; Fungi - 0; Plants - 63; Viruses - 0; Other
Eukaryotes - 0 (source: NCBI BLink).		 0.68 0.3 -0.33
44 AT1G63240 unknown protein; Has 460 Blast hits to 413 proteins in 106
species: Archae - 5; Bacteria - 12; Metazoa - 152; Fungi -
46; Plants - 43; Viruses - 2; Other Eukaryotes - 200
(source: NCBI BLink).		 0.68 0.31 -0.31
45 AT1G77030 hydrolases, acting on acid anhydrides, in
phosphorus-containing anhydrides;ATP-dependent
helicases;nucleic acid binding;ATP binding;RNA
binding;helicases		 -0.68 0.31 -0.34
46 AT5G37680 ADP-ribosylation factor-like A1A ADP-ribosylation factor-like A1A,
ADP-ribosylation factor-like A1A		 0.68 0.31 -0.31
47 AT3G26085 CAAX amino terminal protease family protein 0.67 0.36 -0.31
48 AT3G53950 glyoxal oxidase-related protein 0.67 0.3 -0.32
49 AT3G26410 methyltransferases;nucleic acid binding AtTRM11, tRNA modification 11 -0.67 0.32 -0.3
50 AT2G20980 minichromosome maintenance 10 minichromosome maintenance 10 -0.67 0.31 -0.34
51 AT1G13160 ARM repeat superfamily protein -0.67 0.31 -0.31
52 AT1G05200 glutamate receptor 3.4 glutamate receptor 3.4, glutamate
receptor 3.4, GLUR3		 0.67 0.29 -0.32
53 AT3G23400 Plastid-lipid associated protein PAP / fibrillin family
protein		 fibrillin 4 0.67 0.3 -0.3
54 AT4G34670 Ribosomal protein S3Ae -0.67 0.31 -0.31
55 AT5G60600 4-hydroxy-3-methylbut-2-enyl diphosphate synthase CHLOROPLAST BIOGENESIS 4,
CONSTITUTIVE SUBTILISIN 3, GCPE,
4-hydroxy-3-methylbut-2-enyl
diphosphate synthase, ISPG		 0.67 0.31 -0.33
56 AT3G52610 unknown protein; Has 68 Blast hits to 67 proteins in 21
species: Archae - 0; Bacteria - 11; Metazoa - 0; Fungi - 0;
Plants - 55; Viruses - 0; Other Eukaryotes - 2 (source:
NCBI BLink).		 0.67 0.29 -0.31
57 AT1G50950 Thioredoxin protein with domain of unknown function
(DUF1692)		 0.67 0.3 -0.32
58 AT1G73990 signal peptide peptidase signal peptide peptidase, SPPA1 0.67 0.29 -0.32
59 AT1G70580 alanine-2-oxoglutarate aminotransferase 2 alanine-2-oxoglutarate
aminotransferase 2,
GLUTAMATE:GLYOXYLATE
AMINOTRANSFERASE 2		 0.67 0.3 -0.32
60 AT1G72730 DEA(D/H)-box RNA helicase family protein -0.67 0.31 -0.32
61 AT5G14500 aldose 1-epimerase family protein 0.67 0.33 -0.31
62 AT3G23830 glycine-rich RNA-binding protein 4 AtGRP4, GR-RBP4, glycine-rich
RNA-binding protein 4		 -0.66 0.3 -0.32
63 AT4G29070 Phospholipase A2 family protein 0.66 0.32 -0.31
64 AT3G02050 K+ uptake transporter 3 ARABIDOPSIS THALIANA POTASSIUM
TRANSPORTER 4, ATKUP3, K+ uptake
transporter 3		 0.66 0.33 -0.32
65 AT1G60690 NAD(P)-linked oxidoreductase superfamily protein 0.66 0.3 -0.32
66 AT5G59240 Ribosomal protein S8e family protein -0.66 0.32 -0.31
67 AT5G48850 Tetratricopeptide repeat (TPR)-like superfamily protein SULPHUR DEFICIENCY-INDUCED 1 0.66 0.31 -0.3
68 AT3G59300 Pentatricopeptide repeat (PPR) superfamily protein 0.66 0.34 -0.34
69 AT4G18975 Pentatricopeptide repeat (PPR) superfamily protein 0.66 0.3 -0.3
70 AT5G02270 non-intrinsic ABC protein 9 ATP-binding cassette I20,
ARABIDOPSIS THALIANA NON-INTRINSIC
ABC PROTEIN 9, non-intrinsic ABC
protein 9		 -0.66 0.3 -0.33
71 AT5G13690 alpha-N-acetylglucosaminidase family / NAGLU family CYCLOPS 1,
N-ACETYL-GLUCOSAMINIDASE		 0.66 0.31 -0.3
72 AT5G22840 Protein kinase superfamily protein -0.66 0.3 -0.31
73 AT5G56500 TCP-1/cpn60 chaperonin family protein chaperonin-60beta3 -0.65 0.32 -0.32
74 AT3G56900 Transducin/WD40 repeat-like superfamily protein -0.65 0.3 -0.32
75 AT1G70160 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
endomembrane system; EXPRESSED IN: 24 plant structures;
EXPRESSED DURING: 15 growth stages; BEST Arabidopsis
thaliana protein match is: unknown protein
(TAIR:AT4G27020.1); Has 108 Blast hits to 108 proteins in
20 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi -
0; Plants - 89; Viruses - 0; Other Eukaryotes - 19 (source:
NCBI BLink).		 0.65 0.33 -0.32
76 AT5G42420 Nucleotide-sugar transporter family protein -0.65 0.32 -0.31
77 AT1G01770 unknown protein; CONTAINS InterPro DOMAIN/s: Protein of
unknown function DUF1446 (InterPro:IPR010839); Has 1597
Blast hits to 1509 proteins in 306 species: Archae - 4;
Bacteria - 843; Metazoa - 22; Fungi - 131; Plants - 31;
Viruses - 0; Other Eukaryotes - 566 (source: NCBI BLink).		 0.65 0.31 -0.29
78 AT5G39900 Small GTP-binding protein -0.65 0.3 -0.32
79 AT5G15550 Transducin/WD40 repeat-like superfamily protein -0.65 0.3 -0.32
80 AT4G26980 RNI-like superfamily protein 0.65 0.35 -0.31
81 AT3G21540 transducin family protein / WD-40 repeat family protein -0.65 0.32 -0.3
82 AT2G23410 cis-prenyltransferase cis-prenyltransferase,
cis-prenyltransferase		 -0.65 0.32 -0.32
83 AT5G37930 Protein with RING/U-box and TRAF-like domains 0.65 0.3 -0.32
84 AT1G63800 ubiquitin-conjugating enzyme 5 ubiquitin-conjugating enzyme 5 0.65 0.3 -0.3
85 AT5G64680 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
nucleolus; EXPRESSED IN: 23 plant structures; EXPRESSED
DURING: 13 growth stages; Has 114 Blast hits to 110
proteins in 37 species: Archae - 0; Bacteria - 0; Metazoa -
42; Fungi - 10; Plants - 37; Viruses - 0; Other Eukaryotes
- 25 (source: NCBI BLink).		 -0.64 0.33 -0.31
86 AT1G15060 Uncharacterised conserved protein UCP031088, alpha/beta
hydrolase		 0.64 0.33 -0.32
87 AT5G58390 Peroxidase superfamily protein 0.64 0.31 -0.31
88 AT5G58200 Calcineurin-like metallo-phosphoesterase superfamily
protein		 0.64 0.33 -0.3
89 AT2G15630 Pentatricopeptide repeat (PPR) superfamily protein -0.64 0.33 -0.3
90 AT4G23670 Polyketide cyclase/dehydrase and lipid transport
superfamily protein		 0.64 0.32 -0.31
91 AT2G28450 zinc finger (CCCH-type) family protein -0.64 0.32 -0.29
92 AT2G36290 alpha/beta-Hydrolases superfamily protein -0.64 0.3 -0.3
93 AT5G22740 cellulose synthase-like A02 ARABIDOPSIS THALIANA CELLULOSE
SYNTHASE-LIKE A02, ARABIDOPSIS
THALIANA CELLULOSE SYNTHASE-LIKE
A2, cellulose synthase-like A02,
CELLULOSE SYNTHASE-LIKE A 2		 -0.64 0.3 -0.32
94 AT4G19160 unknown protein; Has 30201 Blast hits to 17322 proteins in
780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338;
Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes
- 2996 (source: NCBI BLink).		 0.64 0.32 -0.32
95 AT5G44110 P-loop containing nucleoside triphosphate hydrolases
superfamily protein		 ATP-binding cassette A21,
ARABIDOPSIS THALIANA NON-INTRINSIC
ABC PROTEIN, ATPOP1, POP1		 -0.64 0.33 -0.3
96 AT2G14850 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT4G33890.2); Has 140 Blast hits
to 132 proteins in 17 species: Archae - 0; Bacteria - 0;
Metazoa - 1; Fungi - 2; Plants - 133; Viruses - 0; Other
Eukaryotes - 4 (source: NCBI BLink).		 0.64 0.34 -0.33
97 AT1G27690 Protein of unknown function (DUF620) 0.64 0.33 -0.32
98 AT5G08620 DEA(D/H)-box RNA helicase family protein RNA HELICASE 25, STRESS RESPONSE
SUPPRESSOR 2		 -0.64 0.32 -0.3
99 AT5G43600 ureidoglycolate amidohydrolase ARABIDOPSIS THALIANA ALLANTOATE
AMIDOHYDROLASE 2, ureidoglycolate
amidohydrolase		 0.64 0.31 -0.32
100 AT1G32190 alpha/beta-Hydrolases superfamily protein -0.63 0.32 -0.29
101 AT1G03380 homolog of yeast autophagy 18 (ATG18) G homolog of yeast autophagy 18
(ATG18) G, homolog of yeast
autophagy 18 (ATG18) G		 0.63 0.32 -0.3
102 AT1G28320 protease-related DEG15 0.63 0.31 -0.31
103 AT3G02940 myb domain protein 107 myb domain protein 107, myb domain
protein 107		 -0.63 0.33 -0.33
104 AT1G16730 unknown protein 6 unknown protein 6 0.63 0.33 -0.33
105 AT4G24740 FUS3-complementing gene 2 FUS3-complementing gene 2, AME1,
FUS3-complementing gene 2		 0.63 0.32 -0.3
106 AT5G04600 RNA-binding (RRM/RBD/RNP motifs) family protein -0.63 0.31 -0.3
107 AT2G17250 CCAAT-binding factor EMBRYO DEFECTIVE 2762 -0.63 0.31 -0.32
108 AT2G35690 acyl-CoA oxidase 5 acyl-CoA oxidase 5 0.63 0.32 -0.32
109 AT3G61600 POZ/BTB containin G-protein 1 POZ/BTB containin G-protein 1,
POZ/BTB containin G-protein 1		 0.63 0.3 -0.31
110 AT2G47460 myb domain protein 12 MYB DOMAIN PROTEIN 12, myb domain
protein 12, PRODUCTION OF FLAVONOL
GLYCOSIDES 1		 -0.62 0.31 -0.33
111 AT5G36150 putative pentacyclic triterpene synthase 3 putative pentacyclic triterpene
synthase 3, putative pentacyclic
triterpene synthase 3		 -0.62 0.3 -0.32
112 AT1G14220 Ribonuclease T2 family protein -0.62 0.35 -0.3
113 AT1G08590 Leucine-rich receptor-like protein kinase family protein -0.62 0.29 -0.32
114 AT3G18200 nodulin MtN21 /EamA-like transporter family protein -0.62 0.3 -0.32
115 AT5G54020 Cysteine/Histidine-rich C1 domain family protein -0.62 0.32 -0.34
116 AT4G28650 Leucine-rich repeat transmembrane protein kinase family
protein		 -0.62 0.31 -0.32
117 AT3G09720 P-loop containing nucleoside triphosphate hydrolases
superfamily protein		 -0.62 0.33 -0.32
118 AT5G18440 CONTAINS InterPro DOMAIN/s: Nuclear fragile X mental
retardation-interacting protein 1, conserved region
(InterPro:IPR019496); Has 1333 Blast hits to 1211 proteins
in 205 species: Archae - 0; Bacteria - 137; Metazoa - 339;
Fungi - 162; Plants - 70; Viruses - 6; Other Eukaryotes -
619 (source: NCBI BLink).		 AtNUFIP, nuclear FMRP-interacting
protein		 -0.61 0.3 -0.31
119 AT1G59940 response regulator 3 response regulator 3 -0.61 0.32 -0.33
120 AT4G03610 Metallo-hydrolase/oxidoreductase superfamily protein -0.61 0.31 -0.32
121 AT4G25320 AT hook motif DNA-binding family protein -0.61 0.34 -0.32
122 AT1G04610 YUCCA 3 YUCCA 3 -0.61 0.32 -0.3
123 AT3G07600 Heavy metal transport/detoxification superfamily protein -0.61 0.3 -0.31
Metabolite information
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  CID Metabolite name Pathway Information Correlation link
Compound name Stereochemistry Aracyc name pcc 2.5% 97.5% PPI
124 C0199 Phosphatidylethanolamine-36:6 - Phosphatidylethanolamine-36:6 phospholipid biosynthesis II,
linoleate biosynthesis I,
phosphatidylethanolamine biosynthesis I,
phosphatidylethanolamine biosynthesis II,
glutathione redox reactions I 		-0.71 0.51 -0.5 C0199
125 C0125 isorhamnetin-3-O-glucoside - - - -0.69 0.45 -0.46
126 C0083 Digalactosyldiacylglycerol-36:4 - Digalactosyldiacylglycerol-36:4 triacylglycerol degradation,
linoleate biosynthesis I,
glycolipid biosynthesis,
glutathione redox reactions I 		-0.66 0.48 -0.5 C0083