AT4G08500 : ARAKIN
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AGICode AT4G08500
Description MAPK/ERK kinase kinase 1
Gene information
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  Gene Code Description / Information Gene name Correlation link
pcc 2.5% 97.5% PPI
1 AT4G08500 MAPK/ERK kinase kinase 1 ARAKIN, ATMEKK1, MAPKKK8, MAPK/ERK
kinase kinase 1
1 0.33 -0.34
2 AT5G22880 histone B2 HISTONE H2B, histone B2 -0.86 0.31 -0.32
3 AT3G10730 SAD1/UNC-84 domain protein 2 ARABIDOPSIS SAD1/UNC-84 DOMAIN
PROTEIN 2, SAD1/UNC-84 domain
protein 2
-0.83 0.33 -0.34
4 AT3G49470 nascent polypeptide-associated complex subunit alpha-like
protein 2
nascent polypeptide-associated
complex subunit alpha-like protein
2
-0.82 0.32 -0.34
5 AT3G54560 histone H2A 11 histone H2A 11 -0.82 0.31 -0.3
6 AT5G45700 Haloacid dehalogenase-like hydrolase (HAD) superfamily
protein
-0.82 0.29 -0.29
7 AT1G16520 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN: plasma
membrane; EXPRESSED IN: 22 plant structures; EXPRESSED
DURING: 13 growth stages; BEST Arabidopsis thaliana protein
match is: unknown protein (TAIR:AT1G56080.1); Has 243 Blast
hits to 234 proteins in 69 species: Archae - 2; Bacteria -
2; Metazoa - 61; Fungi - 9; Plants - 125; Viruses - 0;
Other Eukaryotes - 44 (source: NCBI BLink).
-0.81 0.31 -0.31
8 AT5G10400 Histone superfamily protein -0.81 0.28 -0.31
9 AT5G35560 DENN (AEX-3) domain-containing protein 0.81 0.32 -0.31
10 AT1G07370 proliferating cellular nuclear antigen 1 PROLIFERATING CELLULAR NUCLEAR
ANTIGEN 1, proliferating cellular
nuclear antigen 1
-0.81 0.32 -0.34
11 AT1G72480 Lung seven transmembrane receptor family protein -0.8 0.31 -0.32
12 AT4G28310 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT1G52270.1); Has 30201 Blast
hits to 17322 proteins in 780 species: Archae - 12;
Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants -
5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI
BLink).
-0.8 0.33 -0.3
13 AT5G42870 phosphatidic acid phosphohydrolase 2 PHOSPHATIDIC ACID PHOSPHOHYDROLASE
2, phosphatidic acid
phosphohydrolase 2
0.8 0.3 -0.31
14 AT3G23805 ralf-like 24 ralf-like 24 -0.8 0.31 -0.33
15 AT3G06840 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT5G49170.1); Has 33 Blast hits
to 33 proteins in 9 species: Archae - 0; Bacteria - 0;
Metazoa - 0; Fungi - 0; Plants - 33; Viruses - 0; Other
Eukaryotes - 0 (source: NCBI BLink).
-0.8 0.31 -0.33
16 AT1G20880 RNA-binding (RRM/RBD/RNP motifs) family protein 0.8 0.31 -0.32
17 AT2G42110 unknown protein; Has 27 Blast hits to 27 proteins in 11
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 25; Viruses - 0; Other Eukaryotes - 2 (source:
NCBI BLink).
-0.8 0.33 -0.32
18 AT4G00400 glycerol-3-phosphate acyltransferase 8 AtGPAT8, glycerol-3-phosphate
acyltransferase 8
-0.79 0.32 -0.3
19 AT2G25880 ataurora2 ataurora2, ataurora2 -0.79 0.33 -0.33
20 AT3G07800 Thymidine kinase -0.79 0.33 -0.32
21 AT4G12420 Cupredoxin superfamily protein SKU5 -0.79 0.31 -0.32
22 AT5G10390 Histone superfamily protein -0.79 0.29 -0.31
23 AT3G43810 calmodulin 7 calmodulin 7 -0.79 0.31 -0.34
24 AT4G00400 glycerol-3-phosphate acyltransferase 8 AtGPAT8, glycerol-3-phosphate
acyltransferase 8
-0.79 0.32 -0.31
25 AT3G48520 cytochrome P450, family 94, subfamily B, polypeptide 3 cytochrome P450, family 94,
subfamily B, polypeptide 3
0.79 0.33 -0.32
26 AT3G27060 Ferritin/ribonucleotide reductase-like family protein ATTSO2, TSO MEANING 'UGLY' IN
CHINESE 2
-0.78 0.34 -0.33
27 AT4G15790 unknown protein; INVOLVED IN: biological_process unknown;
LOCATED IN: chloroplast; EXPRESSED IN: 21 plant structures;
EXPRESSED DURING: 13 growth stages; Has 411 Blast hits to
380 proteins in 121 species: Archae - 4; Bacteria - 107;
Metazoa - 85; Fungi - 29; Plants - 59; Viruses - 0; Other
Eukaryotes - 127 (source: NCBI BLink).
-0.78 0.3 -0.32
28 AT2G26780 ARM repeat superfamily protein 0.78 0.34 -0.3
29 AT1G03080 kinase interacting (KIP1-like) family protein 0.78 0.31 -0.31
30 AT2G43100 isopropylmalate isomerase 2 ATLEUD1, isopropylmalate isomerase
2
-0.78 0.32 -0.32
31 AT5G08020 RPA70-kDa subunit B ARABIDOPSIS THALIANA RPA70-KDA
SUBUNIT B, RPA70-kDa subunit B
-0.78 0.29 -0.32
32 AT5G43080 Cyclin A3;1 Cyclin A3;1 -0.78 0.31 -0.32
33 AT2G27130 Bifunctional inhibitor/lipid-transfer protein/seed storage
2S albumin superfamily protein
-0.78 0.32 -0.31
34 AT1G04680 Pectin lyase-like superfamily protein -0.77 0.34 -0.32
35 AT3G14205 Phosphoinositide phosphatase family protein 0.77 0.33 -0.33
36 AT1G12360 Sec1/munc18-like (SM) proteins superfamily keule 0.77 0.32 -0.3
37 AT4G14960 Tubulin/FtsZ family protein TUA6 -0.77 0.32 -0.31
38 AT5G52650 RNA binding Plectin/S10 domain-containing protein -0.77 0.3 -0.32
39 AT1G04820 tubulin alpha-4 chain TORTIFOLIA 2, tubulin alpha-4
chain
-0.77 0.32 -0.31
40 AT1G24460 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
cellular_component unknown; EXPRESSED IN: 23 plant
structures; EXPRESSED DURING: 14 growth stages; BEST
Arabidopsis thaliana protein match is: unknown protein
(TAIR:AT4G31570.1); Has 181008 Blast hits to 85359 proteins
in 3551 species: Archae - 3290; Bacteria - 48304; Metazoa -
70793; Fungi - 13943; Plants - 10118; Viruses - 785; Other
Eukaryotes - 33775 (source: NCBI BLink).
TGN-localized SYP41 interacting
protein
0.77 0.3 -0.3
41 AT5G05000 translocon at the outer envelope membrane of chloroplasts
34
ARABIDOPSIS THALIANA TRANSLOCON AT
THE OUTER ENVELOPE MEMBRANE OF
CHLOROPLASTS 34, OEP34, translocon
at the outer envelope membrane of
chloroplasts 34
-0.77 0.33 -0.31
42 AT2G29570 proliferating cell nuclear antigen 2 A. THALIANA PROLIFERATING CELL
NUCLEAR ANTIGEN 2, proliferating
cell nuclear antigen 2
-0.77 0.3 -0.31
43 AT1G72700 ATPase E1-E2 type family protein / haloacid
dehalogenase-like hydrolase family protein
0.77 0.33 -0.3
44 AT1G33040 nascent polypeptide-associated complex subunit alpha-like
protein 5
nascent polypeptide-associated
complex subunit alpha-like protein
5
-0.77 0.3 -0.31
45 AT3G16860 COBRA-like protein 8 precursor COBRA-like protein 8 precursor 0.77 0.31 -0.32
46 AT2G42890 MEI2-like 2 MEI2-like 2, MEI2-like 2 0.77 0.32 -0.32
47 AT3G45040 phosphatidate cytidylyltransferase family protein 0.77 0.34 -0.34
48 AT3G03220 expansin A13 EXPANSIN 13, expansin A13, ATHEXP
ALPHA 1.22, EXP13, expansin A13
-0.77 0.31 -0.3
49 AT4G39620 Tetratricopeptide repeat (TPR)-like superfamily protein A. THALIANA PENTATRICOPEPTIDE
REPEAT 5, EMBRYO DEFECTIVE 2453
-0.77 0.31 -0.3
50 AT5G27720 Small nuclear ribonucleoprotein family protein embryo defective 1644, SM-like
protein 4
-0.76 0.3 -0.32
51 AT5G66230 Chalcone-flavanone isomerase family protein -0.76 0.33 -0.32
52 AT1G26570 UDP-glucose dehydrogenase 1 UDP-GLUCOSE DEHYDROGENASE 1,
UDP-glucose dehydrogenase 1
-0.76 0.31 -0.33
53 AT3G46940 DUTP-PYROPHOSPHATASE-LIKE 1 DUTP-PYROPHOSPHATASE-LIKE 1 -0.76 0.3 -0.33
54 AT5G35980 yeast YAK1-related gene 1 yeast YAK1-related gene 1 0.76 0.32 -0.31
55 AT3G49490 unknown protein; Has 722 Blast hits to 186 proteins in 64
species: Archae - 0; Bacteria - 30; Metazoa - 72; Fungi -
48; Plants - 38; Viruses - 0; Other Eukaryotes - 534
(source: NCBI BLink).
0.76 0.31 -0.3
56 AT4G39850 peroxisomal ABC transporter 1 ATP-binding cassette D1, acetate
non-utilizing 2, Arabidopsis
thaliana ATP-binding cassette D1,
COMATOSE, PEROXISOME DEFECTIVE 3,
peroxisomal ABC transporter 1
0.76 0.31 -0.29
57 AT2G38160 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT2G40070.2); Has 972 Blast hits
to 731 proteins in 211 species: Archae - 0; Bacteria - 236;
Metazoa - 194; Fungi - 201; Plants - 218; Viruses - 32;
Other Eukaryotes - 91 (source: NCBI BLink).
-0.76 0.33 -0.3
58 AT2G27970 CDK-subunit 2 CDK-subunit 2 -0.76 0.34 -0.32
59 AT1G08180 unknown protein; Has 53 Blast hits to 53 proteins in 9
species: Archae - 0; Bacteria - 0; Metazoa - 1; Fungi - 0;
Plants - 52; Viruses - 0; Other Eukaryotes - 0 (source:
NCBI BLink).
-0.76 0.31 -0.31
60 AT3G04790 Ribose 5-phosphate isomerase, type A protein EMBRYO DEFECTIVE 3119 -0.75 0.31 -0.32
61 AT5G40340 Tudor/PWWP/MBT superfamily protein 0.75 0.31 -0.32
62 AT4G19380 Long-chain fatty alcohol dehydrogenase family protein -0.75 0.33 -0.31
63 AT1G10780 F-box/RNI-like superfamily protein -0.75 0.32 -0.33
64 AT3G14270 phosphatidylinositol-4-phosphate 5-kinase family protein FORMS APLOID AND BINUCLEATE CELLS
1B
0.75 0.32 -0.3
65 AT1G48240 novel plant snare 12 ATNPSN12, novel plant snare 12 -0.75 0.33 -0.3
66 AT5G47630 mitochondrial acyl carrier protein 3 mitochondrial acyl carrier protein
3
-0.75 0.34 -0.31
67 AT4G28570 Long-chain fatty alcohol dehydrogenase family protein 0.75 0.33 -0.32
68 AT1G04780 Ankyrin repeat family protein 0.75 0.33 -0.32
69 AT2G26580 plant-specific transcription factor YABBY family protein YABBY5 -0.75 0.3 -0.31
70 AT4G03100 Rho GTPase activating protein with PAK-box/P21-Rho-binding
domain
-0.75 0.31 -0.32
71 AT1G12460 Leucine-rich repeat protein kinase family protein -0.75 0.32 -0.31
72 AT2G29550 tubulin beta-7 chain tubulin beta-7 chain -0.75 0.34 -0.31
73 AT1G47200 WPP domain protein 2 WPP domain protein 2 -0.75 0.31 -0.3
74 AT5G59870 histone H2A 6 histone H2A 6 -0.75 0.34 -0.33
75 AT5G64670 Ribosomal protein L18e/L15 superfamily protein -0.75 0.31 -0.33
76 AT4G22140 PHD finger family protein / bromo-adjacent homology (BAH)
domain-containing protein
EARLY BOLTING IN SHORT DAYS -0.75 0.32 -0.32
77 AT2G01450 MAP kinase 17 MAP kinase 17, MAP kinase 17 0.74 0.31 -0.32
78 AT3G27360 Histone superfamily protein -0.74 0.34 -0.29
79 AT1G03820 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
endomembrane system; EXPRESSED IN: 21 plant structures;
EXPRESSED DURING: 13 growth stages; Has 1345 Blast hits to
1122 proteins in 102 species: Archae - 2; Bacteria - 28;
Metazoa - 28; Fungi - 30; Plants - 109; Viruses - 0; Other
Eukaryotes - 1148 (source: NCBI BLink).
-0.74 0.32 -0.33
80 AT3G11480 S-adenosyl-L-methionine-dependent methyltransferases
superfamily protein
ATBSMT1, BSMT1 0.74 0.32 -0.31
81 AT4G38840 SAUR-like auxin-responsive protein family -0.74 0.32 -0.29
82 AT5G16680 RING/FYVE/PHD zinc finger superfamily protein 0.74 0.32 -0.31
83 AT5G54730 homolog of yeast autophagy 18 (ATG18) F ARABIDOPSIS THALIANA HOMOLOG OF
YEAST AUTOPHAGY 18 (ATG18) F,
homolog of yeast autophagy 18
(ATG18) F, homolog of yeast
autophagy 18 (ATG18) F
0.74 0.34 -0.3
84 AT1G50010 tubulin alpha-2 chain tubulin alpha-2 chain -0.74 0.34 -0.31
85 AT1G09630 RAB GTPase 11C ARABIDOPSIS RAB GTPASE A2A, RAB
GTPase 11C, ARABIDOPSIS RAB GTPASE
A2A, RAB GTPASE A2A, RAB GTPase
11C
-0.74 0.29 -0.31
86 AT2G35190 novel plant snare 11 ATNPSN11, novel plant snare 11,
NSPN11
-0.74 0.31 -0.32
87 AT1G24120 ARG1-like 1 ARG1-like 1 -0.74 0.31 -0.31
88 AT2G19720 ribosomal protein S15A B ribosomal protein S15A B -0.74 0.32 -0.33
89 AT1G75840 RAC-like GTP binding protein 5 RAC-like GTP binding protein 5,
ARABIDOPSIS THALIANA
GERANYLGERANYLATED PROTEIN 3,
RHO-LIKE GTP BINDING PROTEIN 4,
RHO-LIKE GTP BINDING PROTEIN 4
-0.73 0.34 -0.31
90 AT1G23205 Plant invertase/pectin methylesterase inhibitor superfamily
protein
-0.73 0.33 -0.3
91 AT4G05400 copper ion binding -0.73 0.3 -0.3
92 AT3G19450 GroES-like zinc-binding alcohol dehydrogenase family
protein
ATCAD4, CAD, CAD-C, CINNAMYL
ALCOHOL DEHYDROGENASE 4
-0.73 0.32 -0.33
93 AT3G62590 alpha/beta-Hydrolases superfamily protein 0.73 0.33 -0.29
94 AT3G54630 CONTAINS InterPro DOMAIN/s: Kinetochore protein Ndc80
(InterPro:IPR005550); Has 24780 Blast hits to 15608
proteins in 1321 species: Archae - 545; Bacteria - 2969;
Metazoa - 12597; Fungi - 2181; Plants - 1581; Viruses - 39;
Other Eukaryotes - 4868 (source: NCBI BLink).
-0.73 0.33 -0.36
95 AT3G12400 Ubiquitin-conjugating enzyme/RWD-like protein ATELC, ELC 0.73 0.3 -0.33
96 AT2G26890 DNAJ heat shock N-terminal domain-containing protein GRAVITROPISM DEFECTIVE 2,
KATAMARI2
0.73 0.28 -0.31
97 AT5G58690 phosphatidylinositol-speciwc phospholipase C5 ATPLC5,
phosphatidylinositol-speciwc
phospholipase C5
0.73 0.31 -0.31
98 AT1G48610 AT hook motif-containing protein -0.73 0.3 -0.34
99 AT3G16200 unknown protein; Has 97 Blast hits to 97 proteins in 15
species: Archae - 0; Bacteria - 8; Metazoa - 0; Fungi - 0;
Plants - 36; Viruses - 0; Other Eukaryotes - 53 (source:
NCBI BLink).
-0.73 0.32 -0.31
100 AT3G02640 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT5G16250.1); Has 96 Blast hits
to 96 proteins in 16 species: Archae - 0; Bacteria - 0;
Metazoa - 0; Fungi - 0; Plants - 95; Viruses - 0; Other
Eukaryotes - 1 (source: NCBI BLink).
-0.73 0.31 -0.32
101 AT3G27080 translocase of outer membrane 20 kDa subunit 3 translocase of outer membrane 20
kDa subunit 3
-0.73 0.34 -0.33
102 AT1G04190 Tetratricopeptide repeat (TPR)-like superfamily protein tetratricopeptide repeat 3 -0.73 0.34 -0.29
103 AT2G22010 related to KPC1 related to KPC1 0.73 0.3 -0.31
104 AT3G10610 Ribosomal S17 family protein -0.73 0.32 -0.32
105 AT2G42160 zinc finger (ubiquitin-hydrolase) domain-containing protein BRAP2 RING ZnF UBP
domain-containing protein 1
0.73 0.3 -0.31
106 AT4G32160 Phox (PX) domain-containing protein 0.73 0.3 -0.31
107 AT5G23550 Got1/Sft2-like vescicle transport protein family -0.73 0.32 -0.31
108 AT1G72230 Cupredoxin superfamily protein -0.73 0.3 -0.31
109 AT5G44130 FASCICLIN-like arabinogalactan protein 13 precursor FASCICLIN-like arabinogalactan
protein 13 precursor
-0.72 0.33 -0.29
110 AT2G22010 related to KPC1 related to KPC1 0.72 0.3 -0.28
111 AT1G73980 Phosphoribulokinase / Uridine kinase family 0.72 0.34 -0.33
112 AT4G16800 ATP-dependent caseinolytic (Clp) protease/crotonase family
protein
-0.72 0.29 -0.3
113 AT1G35660 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN: plasma
membrane; EXPRESSED IN: 19 plant structures; EXPRESSED
DURING: 11 growth stages; Has 309 Blast hits to 256
proteins in 99 species: Archae - 0; Bacteria - 11; Metazoa
- 192; Fungi - 12; Plants - 36; Viruses - 0; Other
Eukaryotes - 58 (source: NCBI BLink).
0.72 0.3 -0.29
114 AT3G48425 DNAse I-like superfamily protein -0.72 0.32 -0.3
115 AT1G20340 Cupredoxin superfamily protein DNA-DAMAGE-REPAIR/TOLERATION
PROTEIN 112, PLASTOCYANIN 2
-0.72 0.31 -0.32
116 AT1G07880 Protein kinase superfamily protein ATMPK13 -0.72 0.3 -0.35
117 AT3G51470 Protein phosphatase 2C family protein -0.72 0.31 -0.34
118 AT4G28050 tetraspanin7 tetraspanin7 -0.72 0.35 -0.34
119 AT5G35980 yeast YAK1-related gene 1 yeast YAK1-related gene 1 0.72 0.32 -0.34
120 AT1G55260 Bifunctional inhibitor/lipid-transfer protein/seed storage
2S albumin superfamily protein
-0.72 0.33 -0.32
121 AT1G61690 phosphoinositide binding 0.72 0.3 -0.3
122 AT5G16870 Peptidyl-tRNA hydrolase II (PTH2) family protein -0.72 0.32 -0.31
123 AT4G11370 RING-H2 finger A1A RING-H2 finger A1A 0.72 0.3 -0.3
124 AT2G43000 NAC domain containing protein 42 NAC domain containing protein 42,
NAC domain containing protein 42
0.72 0.31 -0.31
125 AT1G08470 strictosidine synthase-like 3 strictosidine synthase-like 3 -0.72 0.33 -0.31
126 AT1G24330 ARM repeat superfamily protein 0.72 0.33 -0.34
127 AT4G34490 cyclase associated protein 1 cyclase associated protein 1, CAP
1, cyclase associated protein 1
-0.72 0.32 -0.31
128 AT5G59490 Haloacid dehalogenase-like hydrolase (HAD) superfamily
protein
0.72 0.32 -0.34
129 AT2G23670 homolog of Synechocystis YCF37 homolog of Synechocystis YCF37 -0.72 0.32 -0.31
130 AT3G55270 mitogen-activated protein kinase phosphatase 1 ARABIDOPSIS MITOGEN-ACTIVATED
PROTEIN KINASE PHOSPHATASE 1,
mitogen-activated protein kinase
phosphatase 1
0.72 0.3 -0.33
131 AT1G09960 sucrose transporter 4 SUCROSE TRANSPORTER 4, SUCROSE
TRANSPORTER 4, SUCROSE TRANSPORTER
4, sucrose transporter 4
0.72 0.3 -0.33
132 AT5G52430 hydroxyproline-rich glycoprotein family protein 0.72 0.33 -0.31
133 AT4G23300 cysteine-rich RLK (RECEPTOR-like protein kinase) 22 cysteine-rich RLK (RECEPTOR-like
protein kinase) 22
-0.72 0.32 -0.31
134 AT3G27870 ATPase E1-E2 type family protein / haloacid
dehalogenase-like hydrolase family protein
0.71 0.32 -0.33
135 AT1G20490 AMP-dependent synthetase and ligase family protein 0.7 0.32 -0.32
136 AT5G15730 Protein kinase superfamily protein AtCRLK2,
calcium/calmodulin-regulated
receptor-like kinase 2
0.7 0.32 -0.32
137 AT1G23230 CONTAINS InterPro DOMAIN/s: Mediator complex subunit Med23
(InterPro:IPR021629); Has 187 Blast hits to 184 proteins in
67 species: Archae - 0; Bacteria - 0; Metazoa - 135; Fungi
- 0; Plants - 43; Viruses - 0; Other Eukaryotes - 9
(source: NCBI BLink).
0.7 0.32 -0.31
138 AT5G05570 transducin family protein / WD-40 repeat family protein 0.69 0.31 -0.3
139 AT1G63720 BEST Arabidopsis thaliana protein match is:
hydroxyproline-rich glycoprotein family protein
(TAIR:AT5G52430.1); Has 490 Blast hits to 394 proteins in
96 species: Archae - 0; Bacteria - 2; Metazoa - 132; Fungi
- 88; Plants - 175; Viruses - 14; Other Eukaryotes - 79
(source: NCBI BLink).
0.69 0.31 -0.32
140 AT5G56790 Protein kinase superfamily protein 0.69 0.32 -0.32
141 AT3G26910 hydroxyproline-rich glycoprotein family protein 0.69 0.32 -0.33
142 AT3G63500 Protein of unknown function (DUF1423) 0.69 0.31 -0.31
143 AT5G28510 beta glucosidase 24 beta glucosidase 24 0.69 0.31 -0.34
144 AT1G69360 Plant protein of unknown function (DUF863) 0.69 0.3 -0.32
145 AT5G55600 agenet domain-containing protein / bromo-adjacent homology
(BAH) domain-containing protein
0.69 0.31 -0.3