AGICode | AT4G08600 |
Description | transposable element gene |
Gene Code | Description / Information | Gene name | Correlation | link | ||||
---|---|---|---|---|---|---|---|---|
pcc | 2.5% | 97.5% | PPI | |||||
1 | AT4G08600 | transposable element gene | 1 | 0.33 | -0.33 | |||
2 | AT1G31480 | shoot gravitropism 2 (SGR2) | SHOOT GRAVITROPISM 2 | 0.66 | 0.33 | -0.34 | ||
3 | AT4G07640 | transposable element gene | -0.65 | 0.29 | -0.31 | |||
4 | AT1G05610 | ADP-glucose pyrophosphorylase small subunit 2 | ADP-glucose pyrophosphorylase small subunit 2 |
0.65 | 0.32 | -0.34 | ||
5 | AT2G19510 | LOB domain-containing protein 8 | LOB domain-containing protein 8 | 0.64 | 0.31 | -0.31 | ||
6 | AT4G37770 | 1-amino-cyclopropane-1-carboxylate synthase 8 | 1-amino-cyclopropane-1-carboxylate synthase 8 |
-0.63 | 0.32 | -0.31 | ||
7 | AT1G47765 | F-box and associated interaction domains-containing protein | 0.62 | 0.31 | -0.29 | |||
8 | AT4G16680 | P-loop containing nucleoside triphosphate hydrolases superfamily protein |
0.62 | 0.28 | -0.32 | |||
9 | AT2G11210 | transposable element gene | 0.61 | 0.33 | -0.29 | |||
10 | AT4G25540 | homolog of DNA mismatch repair protein MSH3 | ATMSH3, homolog of DNA mismatch repair protein MSH3 |
-0.61 | 0.32 | -0.33 | ||
11 | AT2G17430 | Seven transmembrane MLO family protein | ATMLO7, MILDEW RESISTANCE LOCUS O 7, NORTIA |
-0.61 | 0.32 | -0.32 | ||
12 | AT4G11700 | Protein of unknown function (DUF626) | 0.59 | 0.29 | -0.3 | |||
13 | AT4G02690 | Bax inhibitor-1 family protein | 0.59 | 0.32 | -0.33 | |||
14 | AT5G40460 | unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G27630.1); Has 87 Blast hits to 87 proteins in 12 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 87; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). |
-0.58 | 0.32 | -0.32 | |||
15 | AT2G10440 | unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G15780.1); Has 8319 Blast hits to 5104 proteins in 317 species: Archae - 0; Bacteria - 285; Metazoa - 1706; Fungi - 535; Plants - 320; Viruses - 18; Other Eukaryotes - 5455 (source: NCBI BLink). |
-0.58 | 0.3 | -0.32 | |||
16 | AT1G17455 | ELF4-like 4 | ELF4-like 4 | -0.58 | 0.34 | -0.29 | ||
17 | AT3G11980 | Jojoba acyl CoA reductase-related male sterility protein | FATTY ACID REDUCTASE 2, MALE STERILITY 2 |
-0.58 | 0.31 | -0.31 | ||
18 | AT1G30740 | FAD-binding Berberine family protein | -0.57 | 0.32 | -0.33 | |||
19 | AT2G28980 | transposable element gene | -0.57 | 0.3 | -0.33 | |||
20 | AT3G01750 | Ankyrin repeat family protein | 0.57 | 0.33 | -0.33 | |||
21 | AT3G12203 | serine carboxypeptidase-like 17 | serine carboxypeptidase-like 17 | 0.57 | 0.32 | -0.3 | ||
22 | AT2G35150 | EXORDIUM like 1 | EXORDIUM LIKE 7 | -0.57 | 0.31 | -0.33 | ||
23 | AT5G25475 | AP2/B3-like transcriptional factor family protein | -0.57 | 0.3 | -0.3 | |||
24 | AT1G64210 | Leucine-rich repeat protein kinase family protein | 0.57 | 0.32 | -0.31 | |||
25 | AT3G56960 | phosphatidyl inositol monophosphate 5 kinase 4 | phosphatidyl inositol monophosphate 5 kinase 4 |
-0.56 | 0.32 | -0.31 | ||
26 | AT3G23260 | F-box and associated interaction domains-containing protein | 0.56 | 0.31 | -0.31 | |||
27 | AT5G35380 | Protein kinase protein with adenine nucleotide alpha hydrolases-like domain |
-0.55 | 0.31 | -0.32 | |||
28 | AT1G69860 | Major facilitator superfamily protein | -0.55 | 0.31 | -0.32 | |||
29 | AT5G33350 | pseudogene, similar to P0406H10.5, nucleoid DNA-binding protein cnd41, chloroplast - Nicotiana tabacum, PIR:T01996; blastp match of 37% identity and 1.5e-57 P-value to GP|9711879|dbj|BAB07973.1||AP002524 P0406H10.5 {Oryza sativa (japonica cultivar-group)} |
-0.55 | 0.32 | -0.33 | |||
30 | AT2G17860 | Pathogenesis-related thaumatin superfamily protein | -0.55 | 0.32 | -0.31 | |||
31 | AT1G22130 | AGAMOUS-like 104 | AGAMOUS-like 104 | 0.55 | 0.31 | -0.34 | ||
32 | AT1G64410 | transposable element gene | -0.54 | 0.33 | -0.33 | |||
33 | AT1G35150 | General transcription factor 2-related zinc finger protein | 0.54 | 0.32 | -0.33 | |||
34 | AT5G17350 | unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: N-terminal protein myristoylation; LOCATED IN: cellular_component unknown; EXPRESSED IN: 15 plant structures; EXPRESSED DURING: 8 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G03280.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). |
-0.54 | 0.31 | -0.31 | |||
35 | AT3G45110 | unknown protein; Has 7 Blast hits to 7 proteins in 2 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 7; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). |
0.54 | 0.31 | -0.32 | |||
36 | AT4G13000 | AGC (cAMP-dependent, cGMP-dependent and protein kinase C) kinase family protein |
0.54 | 0.33 | -0.32 | |||
37 | AT3G48010 | cyclic nucleotide-gated channel 16 | CYCLIC NUCLEOTIDE-GATED CHANNEL 16, cyclic nucleotide-gated channel 16 |
-0.54 | 0.28 | -0.34 | ||
38 | AT1G21870 | golgi nucleotide sugar transporter 5 | golgi nucleotide sugar transporter 5 |
0.54 | 0.3 | -0.3 | ||
39 | AT3G42830 | RING/U-box superfamily protein | -0.54 | 0.34 | -0.33 | |||
40 | AT3G45490 | BEST Arabidopsis thaliana protein match is: RING/U-box superfamily protein (TAIR:AT2G25370.1); Has 99 Blast hits to 96 proteins in 10 species: Archae - 0; Bacteria - 2; Metazoa - 0; Fungi - 0; Plants - 97; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). |
0.54 | 0.3 | -0.31 | |||
41 | AT5G55910 | D6 protein kinase | D6 protein kinase | 0.54 | 0.3 | -0.31 | ||
42 | AT1G33220 | Glycosyl hydrolase superfamily protein | 0.53 | 0.32 | -0.3 | |||
43 | AT4G34410 | redox responsive transcription factor 1 | redox responsive transcription factor 1 |
-0.53 | 0.31 | -0.3 | ||
44 | AT3G24050 | GATA transcription factor 1 | GATA transcription factor 1 | 0.53 | 0.33 | -0.29 | ||
45 | AT5G28680 | Malectin/receptor-like protein kinase family protein | ANXUR2 | -0.53 | 0.3 | -0.3 | ||
46 | AT1G10620 | Protein kinase superfamily protein | proline-rich extensin-like receptor kinase 11, proline-rich extensin-like receptor kinase 11 |
0.53 | 0.29 | -0.32 | ||
47 | AT5G09490 | Ribosomal protein S19 family protein | 0.53 | 0.31 | -0.31 | |||
48 | AT2G24450 | FASCICLIN-like arabinogalactan protein 3 precursor | FASCICLIN-like arabinogalactan protein 3 precursor |
-0.52 | 0.32 | -0.3 | ||
49 | AT1G72950 | Disease resistance protein (TIR-NBS class) | -0.52 | 0.3 | -0.31 | |||
50 | AT5G10220 | annexin 6 | annexin 6, ANNEXIN ARABIDOPSIS THALIANA 6 |
-0.52 | 0.28 | -0.33 | ||
51 | AT5G19720 | Ribosomal protein L25/Gln-tRNA synthetase, anti-codon-binding domain |
-0.52 | 0.33 | -0.31 | |||
52 | AT2G06180 | transposable element gene | -0.52 | 0.32 | -0.33 | |||
53 | AT5G13230 | Tetratricopeptide repeat (TPR)-like superfamily protein | -0.52 | 0.31 | -0.3 | |||
54 | AT5G25620 | Flavin-binding monooxygenase family protein | YUCCA6 | 0.52 | 0.33 | -0.32 | ||
55 | AT5G63390 | O-fucosyltransferase family protein | -0.52 | 0.31 | -0.31 | |||
56 | AT5G52490 | Fibrillarin family protein | -0.52 | 0.3 | -0.31 | |||
57 | AT2G20625 | Protein of unknown function (DUF626) | -0.52 | 0.31 | -0.31 | |||
58 | AT2G05290 | transposable element gene | 0.51 | 0.31 | -0.3 | |||
59 | AT4G28700 | ammonium transporter 1;4 | ammonium transporter 1;4 | 0.51 | 0.33 | -0.31 | ||
60 | AT2G45230 | transposable element gene | -0.51 | 0.29 | -0.33 | |||
61 | AT2G39950 | unknown protein; Has 978 Blast hits to 254 proteins in 81 species: Archae - 0; Bacteria - 8; Metazoa - 109; Fungi - 53; Plants - 41; Viruses - 0; Other Eukaryotes - 767 (source: NCBI BLink). |
0.5 | 0.33 | -0.31 | |||
62 | AT4G12220 | BEST Arabidopsis thaliana protein match is: RING/U-box superfamily protein (TAIR:AT4G12210.1); Has 24 Blast hits to 21 proteins in 2 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 24; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). |
-0.5 | 0.3 | -0.32 | |||
63 | AT4G29980 | FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: leaf whorl, sepal, flower, seed; EXPRESSED DURING: petal differentiation and expansion stage, E expanded cotyledon stage; BEST Arabidopsis thaliana protein match is: Fasciclin-like arabinogalactan family protein (TAIR:AT1G30800.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). |
0.5 | 0.31 | -0.29 | |||
64 | AT5G36080 | unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G32904.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). |
-0.49 | 0.32 | -0.31 | |||
65 | AT3G31340 | transposable element gene | -0.49 | 0.31 | -0.32 | |||
66 | AT3G43660 | Vacuolar iron transporter (VIT) family protein | -0.49 | 0.32 | -0.32 | |||
67 | AT5G42380 | calmodulin like 37 | calmodulin like 37, CALMODULIN LIKE 39 |
-0.49 | 0.33 | -0.3 | ||
68 | AT3G42380 | unknown protein; Has 1 Blast hits to 1 proteins in 1 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 1; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). |
-0.49 | 0.31 | -0.32 | |||
69 | AT3G10930 | unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: mitochondrion; EXPRESSED IN: 18 plant structures; EXPRESSED DURING: 9 growth stages; Has 1 Blast hits to 1 proteins in 1 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 1; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). |
-0.48 | 0.31 | -0.32 | |||
70 | AT1G72080 | unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). |
-0.48 | 0.31 | -0.33 | |||
71 | AT2G31770 | RING/U-box superfamily protein | ARIADNE 9, ARABIDOPSIS ARIADNE 9 | -0.48 | 0.32 | -0.31 |