AT4G08650 : -
Query Information
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AGICode AT4G08650
Description transposable element gene
Gene information
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  Gene Code Description / Information Gene name Correlation link
pcc 2.5% 97.5% PPI
1 AT4G08650 transposable element gene 1 0.3 -0.3
2 AT1G59790 Cullin family protein 0.77 0.32 -0.31
3 AT3G17290 transposable element gene 0.76 0.31 -0.34
4 AT3G42350 transposable element gene 0.76 0.3 -0.32
5 AT2G01790 TRAF-like family protein 0.73 0.32 -0.31
6 AT1G74620 RING/U-box superfamily protein 0.73 0.32 -0.31
7 AT3G32100 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
chloroplast; Has 1 Blast hits to 1 proteins in 1 species:
Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants -
1; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).		 -0.72 0.3 -0.32
8 AT3G17980 Calcium-dependent lipid-binding (CaLB domain) family
protein		 Arabidopsis thaliana C2 domain, C2
domain		 0.71 0.31 -0.31
9 AT2G20160 E3 ubiquitin ligase SCF complex subunit SKP1/ASK1 family
protein		 ARABIDOPSIS SKP1-LIKE 17, MEIDOS 0.71 0.31 -0.33
10 AT1G74160 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT1G18620.1); Has 3407 Blast hits
to 2217 proteins in 314 species: Archae - 0; Bacteria -
264; Metazoa - 1296; Fungi - 318; Plants - 346; Viruses -
34; Other Eukaryotes - 1149 (source: NCBI BLink).		 0.71 0.33 -0.29
11 AT5G48750 Cytochrome b561/ferric reductase transmembrane with DOMON
related domain		 -0.69 0.3 -0.31
12 AT3G28260 unknown protein; Has 0 Blast hits to 0 proteins in 0
species (source: NCBI BLink).		 0.69 0.31 -0.32
13 AT1G32320 MAP kinase kinase 10 MAP kinase kinase 10, MAP kinase
kinase 10		 -0.69 0.32 -0.3
14 AT2G02660 F-box associated ubiquitination effector family protein -0.68 0.33 -0.35
15 AT4G16920 Disease resistance protein (TIR-NBS-LRR class) family 0.68 0.3 -0.32
16 AT5G41640 Protein of unknown function (DUF626) 0.68 0.31 -0.33
17 AT3G61800 CONTAINS InterPro DOMAIN/s: Protein of unknown function
DUF2043 (InterPro:IPR018610), ENTH/VHS
(InterPro:IPR008942); Has 308 Blast hits to 279 proteins in
95 species: Archae - 2; Bacteria - 30; Metazoa - 120; Fungi
- 19; Plants - 44; Viruses - 2; Other Eukaryotes - 91
(source: NCBI BLink).		 0.67 0.33 -0.31
18 AT3G59270 FBD-like domain family protein 0.67 0.34 -0.33
19 AT4G03480 Ankyrin repeat family protein -0.67 0.32 -0.32
20 AT5G49440 unknown protein; Has 30201 Blast hits to 17322 proteins in
780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338;
Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes
- 2996 (source: NCBI BLink).		 0.67 0.31 -0.3
21 AT1G76290 AMP-dependent synthetase and ligase family protein 0.67 0.32 -0.3
22 AT3G46960 RNA helicase, ATP-dependent, SK12/DOB1 protein 0.67 0.3 -0.32
23 AT4G39110 Malectin/receptor-like protein kinase family protein 0.66 0.31 -0.3
24 AT4G10690 transposable element gene 0.66 0.32 -0.32
25 AT5G40280 Prenyltransferase family protein ARABIDOPSIS THALIANA FARNESYL
TRANSFERASE BETA SUBUNIT, ENHANCED
RESPONSE TO ABA 1, WIGGUM		 -0.65 0.3 -0.31
26 AT5G27050 AGAMOUS-like 101 AGAMOUS-like 101 0.65 0.33 -0.31
27 AT5G21150 Argonaute family protein ARGONAUTE 9 0.65 0.31 -0.32
28 AT4G11260 phosphatase-related ATSGT1B, ENHANCED DOWNY MILDEW 1,
ENHANCER OF TIR1-1 AUXIN
RESISTANCE 3, RPR1, SGT1B		 -0.65 0.33 -0.31
29 AT1G63190 Cystatin/monellin superfamily protein 0.65 0.32 -0.31
30 AT1G69170 Squamosa promoter-binding protein-like (SBP domain)
transcription factor family protein		 0.64 0.31 -0.3
31 AT1G67220 histone acetyltransferase of the CBP family 2 ARABIDOPSIS THALIANA P300/CBP
ACETYLTRANSFERASE-RELATED PROTEIN
1, HAC02, histone
acetyltransferase of the CBP
family 2		 0.64 0.33 -0.33
32 AT3G20020 protein arginine methyltransferase 6 ARABIDOPSIS THALIANA PROTEIN
ARGININE METHYLTRANSFERASE 6,
protein arginine methyltransferase
6		 0.64 0.3 -0.34
33 AT2G04380 unknown protein; Has 2 Blast hits to 2 proteins in 1
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 2; Viruses - 0; Other Eukaryotes - 0 (source: NCBI
BLink).		 0.64 0.31 -0.3
34 AT1G43970 unknown protein; Has 10 Blast hits to 8 proteins in 1
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 10; Viruses - 0; Other Eukaryotes - 0 (source:
NCBI BLink).		 0.64 0.31 -0.31
35 AT2G41570 transposable element gene -0.64 0.31 -0.31
36 AT3G43100 transposable element gene 0.63 0.32 -0.33
37 AT5G38500 Domain of unknown function (DUF313) 0.63 0.35 -0.31
38 AT4G14810 unknown protein; Has 30201 Blast hits to 17322 proteins in
780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338;
Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes
- 2996 (source: NCBI BLink).		 0.63 0.32 -0.31
39 AT3G15120 P-loop containing nucleoside triphosphate hydrolases
superfamily protein		 0.63 0.3 -0.33
40 AT3G24650 AP2/B3-like transcriptional factor family protein ABA INSENSITIVE 3, ABSCISIC ACID
INSENSITIVE 3, SUGAR INSENSITIVE
10		 0.63 0.33 -0.32
41 AT3G10580 Homeodomain-like superfamily protein 0.63 0.31 -0.3
42 AT3G13280 Putative endonuclease or glycosyl hydrolase 0.63 0.3 -0.33
43 AT1G34080 transposable element gene 0.63 0.31 -0.31
44 AT3G45500 BEST Arabidopsis thaliana protein match is: RING/U-box
protein with C6HC-type zinc finger (TAIR:AT3G45580.1); Has
48 Blast hits to 46 proteins in 4 species: Archae - 0;
Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 48; Viruses
- 0; Other Eukaryotes - 0 (source: NCBI BLink).		 -0.63 0.31 -0.3
45 AT1G44980 pectin methylesterase 7 A. THALIANA PECTIN METHYLESTERASE
7, pectin methylesterase 7		 0.63 0.3 -0.29
46 AT2G13550 unknown protein; Has 23 Blast hits to 20 proteins in 10
species: Archae - 0; Bacteria - 0; Metazoa - 10; Fungi - 0;
Plants - 4; Viruses - 0; Other Eukaryotes - 9 (source: NCBI
BLink).		 0.63 0.3 -0.3
47 AT5G35920 cytochrome P450, family 79, subfamily A, polypeptide 4
pseudogene		 cytochrome P450, family 79,
subfamily A, polypeptide 4
pseudogene		 -0.63 0.32 -0.28
48 AT5G45090 phloem protein 2-A7 phloem protein 2-A7, phloem
protein 2-A7		 0.62 0.32 -0.3
49 AT2G06700 transposable element gene 0.62 0.29 -0.33
50 AT1G69120 K-box region and MADS-box transcription factor family
protein 		AGAMOUS-like 7, APETALA1 0.62 0.32 -0.34
51 AT1G31030 transposable element gene 0.62 0.3 -0.31
52 AT5G43340 phosphate transporter 1;6 phosphate transporter 1;6,
PHOSPHATE TRANSPORTER 6		 0.62 0.32 -0.29
53 AT4G15730 CW-type Zinc Finger 0.62 0.32 -0.34
54 AT2G46940 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT3G62070.1); Has 143 Blast hits
to 141 proteins in 14 species: Archae - 0; Bacteria - 0;
Metazoa - 4; Fungi - 0; Plants - 139; Viruses - 0; Other
Eukaryotes - 0 (source: NCBI BLink).		 0.62 0.31 -0.32
55 AT5G11050 myb domain protein 64 myb domain protein 64, myb domain
protein 64		 0.61 0.29 -0.31
56 AT5G45080 phloem protein 2-A6 phloem protein 2-A6, phloem
protein 2-A6		 0.61 0.34 -0.32
57 AT2G10930 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT5G48500.1); Has 7 Blast hits to
7 proteins in 1 species: Archae - 0; Bacteria - 0; Metazoa
- 0; Fungi - 0; Plants - 7; Viruses - 0; Other Eukaryotes -
0 (source: NCBI BLink).		 0.61 0.3 -0.32
58 AT4G28140 Integrase-type DNA-binding superfamily protein 0.61 0.32 -0.32
59 AT3G03510 Phototropic-responsive NPH3 family protein 0.61 0.32 -0.33
60 AT5G52830 WRKY DNA-binding protein 27 ARABIDOPSIS THALIANA WRKY
DNA-BINDING PROTEIN 27, WRKY
DNA-binding protein 27		 -0.61 0.31 -0.31
61 AT2G16090 RING/U-box superfamily protein ARIADNE 2, ARABIDOPSIS ARIADNE 2 0.61 0.33 -0.31
62 AT3G04200 RmlC-like cupins superfamily protein 0.61 0.32 -0.31
63 AT5G42640 C2H2 and C2HC zinc fingers superfamily protein -0.61 0.33 -0.33
64 AT2G13760 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT1G24380.1); Has 68 Blast hits
to 68 proteins in 20 species: Archae - 0; Bacteria - 0;
Metazoa - 2; Fungi - 4; Plants - 43; Viruses - 0; Other
Eukaryotes - 19 (source: NCBI BLink).		 -0.61 0.31 -0.33
65 AT5G39380 Plant calmodulin-binding protein-related 0.61 0.31 -0.3
66 AT1G48090 calcium-dependent lipid-binding family protein 0.61 0.31 -0.32
67 AT1G09190 Tetratricopeptide repeat (TPR)-like superfamily protein -0.6 0.34 -0.32
68 AT2G34980 phosphatidylinositolglycan synthase family protein SETH1 0.6 0.31 -0.32
69 AT5G55300 DNA topoisomerase I alpha MGOUN 1, TOPOISOMERASE 1, DNA
topoisomerase I alpha		 0.6 0.32 -0.3
70 AT3G21830 SKP1-like 8 SKP1-like 8, SKP1-like 8 -0.6 0.3 -0.32
71 AT3G21865 peroxin 22 peroxin 22 -0.6 0.32 -0.32
72 AT2G21770 cellulose synthase A9 CESA09, cellulose synthase A9 0.6 0.32 -0.34
73 AT2G07728 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
cellular_component unknown; EXPRESSED IN: cultured cell;
Has 1 Blast hits to 1 proteins in 1 species: Archae - 0;
Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 1; Viruses -
0; Other Eukaryotes - 0 (source: NCBI BLink).		 0.6 0.32 -0.31
74 AT2G17950 Homeodomain-like superfamily protein PGA6, WUSCHEL, WUSCHEL 1 -0.59 0.32 -0.31
75 AT5G43000 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
endomembrane system; Has 1807 Blast hits to 1807 proteins
in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736;
Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes -
339 (source: NCBI BLink).		 -0.59 0.31 -0.3
76 AT3G19780 LOCATED IN: endomembrane system; CONTAINS InterPro
DOMAIN/s: Protein of unknown function DUF179
(InterPro:IPR003774), Thioredoxin fold
(InterPro:IPR012335), Thioredoxin-like fold
(InterPro:IPR012336); BEST Arabidopsis thaliana protein
match is: Protein of unknown function (DUF179)
(TAIR:AT1G33780.1); Has 74 Blast hits to 72 proteins in 32
species: Archae - 0; Bacteria - 24; Metazoa - 11; Fungi -
3; Plants - 32; Viruses - 0; Other Eukaryotes - 4 (source:
NCBI BLink).		 -0.58 0.3 -0.3
77 AT1G18290 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: N-terminal protein myristoylation; LOCATED IN:
chloroplast; EXPRESSED IN: root; Has 94 Blast hits to 94
proteins in 12 species: Archae - 0; Bacteria - 0; Metazoa -
0; Fungi - 0; Plants - 94; Viruses - 0; Other Eukaryotes -
0 (source: NCBI BLink).		 -0.58 0.32 -0.32
78 AT4G33370 DEA(D/H)-box RNA helicase family protein -0.58 0.32 -0.3
79 AT3G54170 FKBP12 interacting protein 37 FKBP12 interacting protein 37,
FKBP12 interacting protein 37		 -0.58 0.32 -0.31
80 AT3G29010 Biotin/lipoate A/B protein ligase family -0.58 0.32 -0.31
81 AT2G20620 Protein of unknown function (DUF626) -0.57 0.33 -0.3
82 AT2G46505 succinate dehydrogenase subunit 4 succinate dehydrogenase subunit 4 -0.57 0.31 -0.33
83 AT2G39530 Uncharacterised protein family (UPF0497) -0.57 0.32 -0.31
84 AT5G66640 DA1-related protein 3 DA1-related protein 3 -0.57 0.31 -0.3
85 AT1G22885 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
endomembrane system; EXPRESSED IN: 22 plant structures;
EXPRESSED DURING: 13 growth stages; Has 15 Blast hits to 15
proteins in 2 species: Archae - 0; Bacteria - 0; Metazoa -
0; Fungi - 0; Plants - 15; Viruses - 0; Other Eukaryotes -
0 (source: NCBI BLink).		 -0.56 0.32 -0.33
86 AT4G01740 Cysteine/Histidine-rich C1 domain family protein -0.56 0.31 -0.3
87 AT1G68230 Reticulon family protein -0.56 0.33 -0.32
88 AT3G59130 Cysteine/Histidine-rich C1 domain family protein -0.56 0.33 -0.29
89 AT5G16500 Protein kinase superfamily protein -0.55 0.31 -0.32
90 AT1G42580 transposable element gene -0.55 0.31 -0.31
91 AT5G04670 Enhancer of polycomb-like transcription factor protein -0.55 0.34 -0.3
92 AT2G27550 centroradialis centroradialis -0.55 0.32 -0.32
93 AT5G54750 Transport protein particle (TRAPP) component -0.55 0.33 -0.32
94 AT3G28770 Protein of unknown function (DUF1216) -0.54 0.3 -0.34
95 AT4G08030 transposable element gene -0.54 0.32 -0.3
Metabolite information
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  CID Metabolite name Pathway Information Correlation link
Compound name Stereochemistry Aracyc name pcc 2.5% 97.5% PPI
96 C0261 UDP-glucose - UDP-D-glucose quercetin glucoside biosynthesis (Arabidopsis),
abscisic acid glucose ester biosynthesis,
anthocyanin biosynthesis (delphinidin 3-O-glucoside),
UDP-glucose biosynthesis (from sucrose),
2,4,6-trinitrotoluene degradation,
galactose degradation I (Leloir pathway),
cytokinins-O-glucoside biosynthesis,
trehalose biosynthesis I,
dolichyl-diphosphooligosaccharide biosynthesis,
phenolic malonylglucosides biosynthesis,
callose biosynthesis,
superpathway of anthocyanin biosynthesis (from cyanidin and cyanidin 3-O-glucoside),
glucosinolate biosynthesis from hexahomomethionine,
coniferin metabolism,
glucosinolate biosynthesis from phenylalanine,
xyloglucan biosynthesis,
glucosinolate biosynthesis from pentahomomethionine,
anthocyanin biosynthesis (pelargonidin 3-O-glucoside, cyanidin 3-O-glucoside),
glucosinolate biosynthesis from dihomomethionine,
cellulose biosynthesis,
sinapate ester biosynthesis,
superpathway of IAA conjugate biosynthesis,
salicylate glucosides biosynthesis IV,
sucrose biosynthesis I,
glucosinolate biosynthesis from trihomomethionine,
tetrahydrofolate biosynthesis II,
sucrose degradation III,
UDP-D-xylose and UDP-D-glucuronate biosynthesis,
coumarin biosynthesis (via 2-coumarate),
superpathway of sucrose and starch metabolism I (non-photosynthetic tissue),
monolignol glucosides biosynthesis,
glucosinolate biosynthesis from homomethionine,
kaempferol glucoside biosynthesis (Arabidopsis),
salicylate glucosides biosynthesis III,
cytokinins 7-N-glucoside biosynthesis,
galactose degradation III,
cytokinins 9-N-glucoside biosynthesis,
glucosinolate biosynthesis from tryptophan,
UDP-galactose biosynthesis,
salicylate glucosides biosynthesis II,
stachyose degradation,
superpathway of sucrose and starch metabolism II (photosynthetic tissue),
UDP-glucose biosynthesis (from glucose 6-phosphate),
sphingolipid biosynthesis (plants),
glucosinolate biosynthesis from tetrahomomethionine,
galactose degradation II,
UDP-L-rhamnose biosynthesis 		0.75 0.45 -0.43 C0261
97 C0262 UDP-glucuronic acid - UDP-D-glucuronate xylan biosynthesis,
UDP-D-glucuronate biosynthesis (from myo-inositol),
UDP-D-galacturonate biosynthesis I (from UDP-D-glucuronate),
UDP-D-apiose biosynthesis (from UDP-D-glucuronate),
galactose degradation III,
UDP-D-xylose and UDP-D-glucuronate biosynthesis 		0.73 0.44 -0.42 C0262
98 C0032 3-Phosphoglyceric acid 3-Phospho-(R)-glyceric acid 3-Phosphoglycerate glycolysis I,
gluconeogenesis I,
Calvin-Benson-Bassham cycle,
sucrose biosynthesis I,
serine biosynthesis,
photorespiration,
Rubisco shunt,
glycolysis IV (plant cytosol) 		0.71 0.45 -0.47 C0032
99 C0075 dGDP - dGDP purine nucleotide metabolism (phosphotransfer and nucleotide modification) 0.7 0.42 -0.42 C0075
100 C0234 Sinapoyl glucose 1-O-Sinapoyl-β-D-glucose 1-O-Sinapoyl-β-D-glucose sinapate ester biosynthesis 0.69 0.47 -0.44 C0234
101 C0099 Glucose-1-phosphate α,β-D-Glucose-1-phosphate α-D-Glucose-1-phosphate; β-D-Glucose-1-phosphate galactose degradation I (Leloir pathway) 0.68 0.42 -0.45 C0099
102 C0091 Fructose-1,6-bisphosphate D-Fructose-1,6-bisphosphate Fructose-1,6-bisphosphate gluconeogenesis I,
Calvin-Benson-Bassham cycle,
glycolysis IV (plant cytosol),
glycolysis I,
CA1P biosynthesis,
sucrose biosynthesis I 		0.66 0.44 -0.43 C0091
103 C0088 FAD - FAD cytokinins degradation,
lysine degradation II,
valine degradation I,
isoleucine degradation I,
flavin biosynthesis I (bacteria and plants) 		0.65 0.42 -0.43 C0088
104 C0027 2-Oxoglutaric acid - α-Ketoglutarate gibberellin biosynthesis III (early C-13 hydroxylation),
leucopelargonidin and leucocyanidin biosynthesis,
aspartate degradation II,
ornithine biosynthesis,
isoleucine biosynthesis I (from threonine),
pantothenate biosynthesis,
phenylalanine degradation III,
flavonol biosynthesis,
lysine biosynthesis VI,
luteolin biosynthesis,
ammonia assimilation cycle II,
serine biosynthesis,
flavonoid biosynthesis,
glutamate biosynthesis V,
aspartate biosynthesis,
glutamate degradation I,
gibberellin inactivation I (2beta-hydroxylation),
alanine degradation III,
photorespiration,
valine biosynthesis,
glycine biosynthesis,
arginine biosynthesis II (acetyl cycle),
arginine degradation I (arginase pathway),
gibberellin biosynthesis II (early C-3 hydroxylation),
leucine biosynthesis,
glutamate biosynthesis IV,
tyrosine biosynthesis II,
proline biosynthesis III,
citrulline biosynthesis,
anthocyanin biosynthesis (pelargonidin 3-O-glucoside, cyanidin 3-O-glucoside),
L-Ndelta-acetylornithine biosynthesis,
isoleucine degradation I,
alanine biosynthesis II,
tyrosine biosynthesis I,
TCA cycle variation III (eukaryotic),
leucine degradation I,
alanine degradation II (to D-lactate),
TCA cycle variation V (plant),
arginine degradation VI (arginase 2 pathway),
valine degradation I,
gibberellin biosynthesis I (non C-3, non C-13 hydroxylation),
1,4-dihydroxy-2-naphthoate biosynthesis II (plants),
2-ketoglutarate dehydrogenase complex,
glutamate degradation IV,
tyrosine degradation I,
anthocyanin biosynthesis (delphinidin 3-O-glucoside),
IAA biosynthesis I,
phenylalanine biosynthesis II,
lysine degradation II,
scopoletin biosynthesis,
4-hydroxyphenylpyruvate biosynthesis,
histidine biosynthesis,
glutamine biosynthesis III,
leucodelphinidin biosynthesis 		0.65 0.43 -0.42 C0027
105 C0149 Mevalonolactone D,L-Mevalonolactone - terpenoid biosynthesis 0.65 0.42 -0.44
106 C0006 β-Homothreonine L-β-Homothreonine - - 0.63 0.44 -0.46