AT4G07780 : -
Query Information
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AGICode AT4G07780
Description transposable element gene
Gene information
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  Gene Code Description / Information Gene name Correlation link
pcc 2.5% 97.5% PPI
1 AT4G07780 transposable element gene 1 0.33 -0.32
2 AT5G11820 Plant self-incompatibility protein S1 family 0.75 0.31 -0.31
3 AT5G25290 F-box family protein with a domain of unknown function
(DUF295)		 -0.71 0.31 -0.33
4 AT4G20290 unknown protein; Has 30201 Blast hits to 17322 proteins in
780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338;
Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes
- 2996 (source: NCBI BLink).		 0.7 0.31 -0.33
5 AT4G10880 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT4G10870.1); Has 1807 Blast hits
to 1807 proteins in 277 species: Archae - 0; Bacteria - 0;
Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0;
Other Eukaryotes - 339 (source: NCBI BLink).		 -0.67 0.32 -0.32
6 AT3G19510 Homeodomain-like protein with RING/FYVE/PHD-type zinc
finger domain		 HAT3.1 -0.66 0.31 -0.29
7 AT5G19640 Major facilitator superfamily protein 0.65 0.32 -0.3
8 AT5G59050 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT3G54000.1); Has 35333 Blast
hits to 34131 proteins in 2444 species: Archae - 798;
Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531;
Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink).		 0.65 0.3 -0.32
9 AT1G61440 S-locus lectin protein kinase family protein 0.65 0.33 -0.31
10 AT1G33320 Pyridoxal phosphate (PLP)-dependent transferases
superfamily protein		 -0.65 0.32 -0.32
11 AT4G10730 Protein kinase superfamily protein 0.65 0.31 -0.33
12 AT2G36700 Pectin lyase-like superfamily protein -0.64 0.33 -0.32
13 AT5G48290 Heavy metal transport/detoxification superfamily protein -0.64 0.33 -0.32
14 AT2G31210 basic helix-loop-helix (bHLH) DNA-binding superfamily
protein		 0.64 0.35 -0.33
15 AT5G63070 Ribosomal protein S19 family protein 0.64 0.31 -0.33
16 AT1G31260 zinc transporter 10 precursor zinc transporter 10 precursor 0.63 0.31 -0.31
17 AT1G47680 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
endomembrane system; BEST Arabidopsis thaliana protein
match is: unknown protein (TAIR:AT1G47700.1); Has 3 Blast
hits to 3 proteins in 1 species: Archae - 0; Bacteria - 0;
Metazoa - 0; Fungi - 0; Plants - 3; Viruses - 0; Other
Eukaryotes - 0 (source: NCBI BLink).		 0.63 0.32 -0.33
18 AT2G33240 myosin XI D MYOSIN XI D, myosin XI D 0.63 0.3 -0.31
19 AT5G44970 Protein with RNI-like/FBD-like domains -0.63 0.33 -0.3
20 AT2G04600 transposable element gene -0.63 0.33 -0.29
21 AT1G02540 unknown protein; Has 3327 Blast hits to 2216 proteins in
265 species: Archae - 18; Bacteria - 202; Metazoa - 802;
Fungi - 283; Plants - 84; Viruses - 187; Other Eukaryotes -
1751 (source: NCBI BLink).		 -0.63 0.29 -0.31
22 AT3G50170 Plant protein of unknown function (DUF247) 0.63 0.33 -0.31
23 AT1G10010 amino acid permease 8 amino acid permease 8, ATAAP8 0.62 0.34 -0.31
24 AT4G04100 transposable element gene 0.62 0.3 -0.33
25 AT5G38820 Transmembrane amino acid transporter family protein -0.62 0.32 -0.3
26 AT2G02830 transposable element gene -0.62 0.33 -0.29
27 AT2G24010 serine carboxypeptidase-like 23 serine carboxypeptidase-like 23 0.61 0.31 -0.31
28 AT3G42070 transposable element gene -0.61 0.32 -0.31
29 AT1G02720 galacturonosyltransferase 5 galacturonosyltransferase 5 -0.61 0.31 -0.29
30 AT5G52360 actin depolymerizing factor 10 actin depolymerizing factor 10 0.61 0.34 -0.32
31 AT5G08535 D111/G-patch domain-containing protein 0.61 0.36 -0.3
32 AT3G04420 NAC domain containing protein 48 NAC domain containing protein 48,
NAC domain containing protein 48		 -0.61 0.29 -0.31
33 AT2G17860 Pathogenesis-related thaumatin superfamily protein -0.61 0.32 -0.32
34 AT5G35820 transposable element gene 0.61 0.31 -0.32
35 AT5G53520 oligopeptide transporter 8 oligopeptide transporter 8,
oligopeptide transporter 8		 -0.6 0.3 -0.32
36 AT3G09090 defective in exine formation protein (DEX1) DEFECTIVE IN EXINE FORMATION 1 -0.6 0.33 -0.3
37 AT4G04440 transposable element gene 0.6 0.32 -0.3
38 AT1G50140 P-loop containing nucleoside triphosphate hydrolases
superfamily protein		 0.6 0.31 -0.32
39 AT3G19070 Homeodomain-like superfamily protein -0.6 0.31 -0.3
40 AT4G37950 Rhamnogalacturonate lyase family protein -0.6 0.31 -0.31
41 AT1G19100 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
family protein		 0.6 0.33 -0.32
42 AT2G03450 purple acid phosphatase 9 PURPLE ACID PHOSPHATASE 9, purple
acid phosphatase 9		 -0.6 0.33 -0.32
43 AT1G65640 DegP protease 4 DegP protease 4 0.59 0.33 -0.34
44 AT4G12920 Eukaryotic aspartyl protease family protein UNDEAD -0.59 0.3 -0.31
45 AT5G45070 phloem protein 2-A8 phloem protein 2-A8, phloem
protein 2-A8		 -0.59 0.34 -0.32
46 AT5G38910 RmlC-like cupins superfamily protein -0.59 0.29 -0.35
47 AT3G22040 Domain of unknown function (DUF26) 0.59 0.34 -0.31
48 AT3G29796 unknown protein; Has 28 Blast hits to 20 proteins in 8
species: Archae - 0; Bacteria - 0; Metazoa - 18; Fungi - 0;
Plants - 1; Viruses - 0; Other Eukaryotes - 9 (source: NCBI
BLink).		 -0.59 0.31 -0.3
49 AT1G44935 transposable element gene sadhu non-coding retrotransposon
9-1		 0.59 0.33 -0.32
50 AT5G20330 beta-1,3-glucanase 4 beta-1,3-glucanase 4 -0.59 0.31 -0.32
51 AT2G19640 ASH1-related protein 2 ASH1-related 2, SET DOMAIN PROTEIN
39		 -0.59 0.31 -0.33
52 AT2G45750 S-adenosyl-L-methionine-dependent methyltransferases
superfamily protein		 -0.59 0.32 -0.31
53 AT2G35590 pseudogene, serpin (serine protease inhibitor), putative,
similar to protein zx (Hordeum vulgare subsp. vulgare)
GI:19071, serpin (Triticum aestivum) GI:1885346; contains
Pfam profile PF00079: Serpin (serine protease inhibitor);
this is very likely a pseudogene.; blastp match of 52%
identity and 2.2e-73 P-value to
GP|26224736|gb|AAN76362.1||AY158152 serpin-like protein
{Citrus x paradisi}		 0.58 0.31 -0.31
54 AT1G10980 Lung seven transmembrane receptor family protein -0.58 0.31 -0.3
55 AT3G45320 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT5G60330.1); Has 7 Blast hits to
7 proteins in 2 species: Archae - 0; Bacteria - 0; Metazoa
- 0; Fungi - 0; Plants - 7; Viruses - 0; Other Eukaryotes -
0 (source: NCBI BLink).		 0.58 0.32 -0.33
56 AT3G43420 unknown protein; Has 1 Blast hits to 1 proteins in 1
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 1; Viruses - 0; Other Eukaryotes - 0 (source: NCBI
BLink).		 0.58 0.31 -0.3
57 AT5G40560 DegP protease 13 DegP protease 13 0.58 0.31 -0.34
58 AT1G25240 ENTH/VHS/GAT family protein 0.58 0.32 -0.31
59 AT2G03320 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
endomembrane system; Has 4 Blast hits to 4 proteins in 2
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 4; Viruses - 0; Other Eukaryotes - 0 (source: NCBI
BLink).		 0.58 0.33 -0.32
60 AT5G39420 CDC2C CDC2C 0.58 0.31 -0.31
61 AT5G52770 Copper transport protein family -0.58 0.31 -0.3
62 AT5G35150 transposable element gene -0.58 0.32 -0.32
63 AT4G02910 unknown protein; Has 5 Blast hits to 5 proteins in 2
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 5; Viruses - 0; Other Eukaryotes - 0 (source: NCBI
BLink).		 0.58 0.31 -0.31
64 AT1G32330 heat shock transcription factor A1D heat shock transcription factor
A1D, heat shock transcription
factor A1D		 -0.58 0.33 -0.29
65 AT1G43886 transposable element gene 0.57 0.31 -0.31
66 AT1G76530 Auxin efflux carrier family protein 0.57 0.34 -0.32
67 AT5G17260 NAC domain containing protein 86 NAC domain containing protein 86,
NAC domain containing protein 86		 0.57 0.32 -0.3
68 AT5G38450 cytochrome P450, family 735, subfamily A, polypeptide 1 cytochrome P450, family 735,
subfamily A, polypeptide 1		 -0.57 0.33 -0.31
69 AT3G15930 Pentatricopeptide repeat (PPR) superfamily protein -0.57 0.31 -0.36
70 AT1G23690 Domain of unknown function DUF220 0.57 0.33 -0.3
71 AT3G46070 C2H2-type zinc finger family protein -0.57 0.34 -0.3
72 AT2G26940 C2H2-type zinc finger family protein 0.57 0.31 -0.31
73 AT3G59070 Cytochrome b561/ferric reductase transmembrane with DOMON
related domain		 0.57 0.34 -0.3
74 AT4G07540 transposable element gene 0.57 0.31 -0.32
75 AT1G37537 transposable element gene -0.57 0.32 -0.31
76 AT5G25380 cyclin a2;1 cyclin a2;1 0.57 0.31 -0.33
77 AT5G10140 K-box region and MADS-box transcription factor family
protein 		AGAMOUS-like 25, FLC, FLOWERING
LOCUS C, FLOWERING LOCUS F		 0.56 0.32 -0.3
78 AT4G07586 transposable element gene -0.56 0.32 -0.3
79 AT3G61720 Ca2+dependent plant phosphoribosyltransferase family
protein		 0.56 0.31 -0.31
80 AT2G18610 unknown protein; Has 1 Blast hits to 1 proteins in 1
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 1; Viruses - 0; Other Eukaryotes - 0 (source: NCBI
BLink).		 0.56 0.31 -0.29
81 AT2G16340 unknown protein; Has 64 Blast hits to 48 proteins in 21
species: Archae - 2; Bacteria - 36; Metazoa - 11; Fungi -
6; Plants - 3; Viruses - 2; Other Eukaryotes - 4 (source:
NCBI BLink).		 -0.56 0.32 -0.33
82 AT3G44840 S-adenosyl-L-methionine-dependent methyltransferases
superfamily protein		 -0.56 0.31 -0.32
83 ATMG00070 NADH dehydrogenase subunit 9 NADH dehydrogenase subunit 9 -0.56 0.3 -0.31
84 AT3G31300 transposable element gene -0.56 0.35 -0.32
85 AT5G27650 Tudor/PWWP/MBT superfamily protein 0.55 0.31 -0.3
86 AT5G40050 F-box/FBD-like domains containing protein 0.55 0.32 -0.31
87 AT1G35150 General transcription factor 2-related zinc finger protein 0.55 0.33 -0.3
88 AT1G69500 cytochrome P450, family 704, subfamily B, polypeptide 1 cytochrome P450, family 704,
subfamily B, polypeptide 1		 0.55 0.31 -0.31
89 AT5G38610 Plant invertase/pectin methylesterase inhibitor superfamily
protein		 0.55 0.31 -0.32
90 AT5G27240 DNAJ heat shock N-terminal domain-containing protein -0.55 0.32 -0.33
91 AT5G66890 Leucine-rich repeat (LRR) family protein -0.55 0.34 -0.31
92 AT1G66120 AMP-dependent synthetase and ligase family protein -0.55 0.3 -0.32
93 AT5G60740 ABC transporter family protein ATP-binding cassette G28 0.55 0.32 -0.32
94 AT4G15030 CONTAINS InterPro DOMAIN/s: Folate-sensitive fragile site
protein Fra10Ac1 (InterPro:IPR019129); Has 8455 Blast hits
to 5700 proteins in 376 species: Archae - 6; Bacteria -
264; Metazoa - 3820; Fungi - 744; Plants - 645; Viruses -
76; Other Eukaryotes - 2900 (source: NCBI BLink).		 0.55 0.3 -0.3
95 AT3G55670 CONTAINS InterPro DOMAIN/s: FBD (InterPro:IPR013596),
FBD-like (InterPro:IPR006566); BEST Arabidopsis thaliana
protein match is: F-box/RNI-like/FBD-like
domains-containing protein (TAIR:AT3G52680.2); Has 400
Blast hits to 249 proteins in 3 species: Archae - 0;
Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 400; Viruses
- 0; Other Eukaryotes - 0 (source: NCBI BLink).		 0.55 0.34 -0.33
96 AT4G20370 PEBP (phosphatidylethanolamine-binding protein) family
protein		 TWIN SISTER OF FT -0.54 0.34 -0.32
97 AT1G67220 histone acetyltransferase of the CBP family 2 ARABIDOPSIS THALIANA P300/CBP
ACETYLTRANSFERASE-RELATED PROTEIN
1, HAC02, histone
acetyltransferase of the CBP
family 2		 -0.54 0.29 -0.32
98 AT4G30120 heavy metal atpase 3 A. THALIANA HEAVY METAL ATPASE 3,
heavy metal atpase 3		 0.54 0.33 -0.29
99 AT4G03940 unknown protein; Has 8 Blast hits to 8 proteins in 3
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 6; Viruses - 0; Other Eukaryotes - 2 (source: NCBI
BLink).		 -0.54 0.31 -0.34
100 AT5G05390 laccase 12 laccase 12 0.54 0.32 -0.29
101 AT5G14300 prohibitin 5 prohibitin 5, prohibitin 5 0.54 0.33 -0.3
102 AT2G46310 cytokinin response factor 5 cytokinin response factor 5 -0.54 0.32 -0.32
103 AT2G13760 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT1G24380.1); Has 68 Blast hits
to 68 proteins in 20 species: Archae - 0; Bacteria - 0;
Metazoa - 2; Fungi - 4; Plants - 43; Viruses - 0; Other
Eukaryotes - 19 (source: NCBI BLink).		 0.54 0.31 -0.31
104 AT1G73280 serine carboxypeptidase-like 3 serine carboxypeptidase-like 3 -0.54 0.32 -0.29
105 AT5G13790 AGAMOUS-like 15 AGAMOUS-like 15 0.54 0.3 -0.31
106 AT4G05640 transposable element gene 0.54 0.32 -0.32
107 AT2G37730 Protein of unknown function (DUF604) -0.54 0.29 -0.29
Metabolite information
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  CID Metabolite name Pathway Information Correlation link
Compound name Stereochemistry Aracyc name pcc 2.5% 97.5% PPI
108 C0101 Glutamic acid D,L-Glutamic acid L-Glutamate; D-Glutamate tyrosine biosynthesis I,
serine biosynthesis,
tyrosine degradation I,
uridine-5'-phosphate biosynthesis,
proline biosynthesis III,
glutamate biosynthesis V,
glycine biosynthesis,
lysine biosynthesis VI,
leucine biosynthesis,
UDP-N-acetyl-D-glucosamine biosynthesis II,
tRNA charging,
gamma-glutamyl cycle (plant pathway),
L-Ndelta-acetylornithine biosynthesis,
tryptophan biosynthesis,
glucosinolate biosynthesis from pentahomomethionine,
4-hydroxyphenylpyruvate biosynthesis,
proline degradation II,
photorespiration,
5-aminoimidazole ribonucleotide biosynthesis I,
folate polyglutamylation,
ammonia assimilation cycle II,
arginine degradation VI (arginase 2 pathway),
asparagine biosynthesis III (tRNA-dependent),
tetrahydrofolate biosynthesis II,
glutamine biosynthesis III,
valine degradation I,
glucosinolate biosynthesis from dihomomethionine,
phenylalanine biosynthesis II,
citrulline biosynthesis,
gamma-glutamyl cycle,
indole-3-acetyl-amino acid biosynthesis,
purine nucleotides de novo biosynthesis II,
IAA biosynthesis I,
NAD biosynthesis I (from aspartate),
alanine biosynthesis II,
purine nucleotide metabolism (phosphotransfer and nucleotide modification),
glucosinolate biosynthesis from homomethionine,
phenylalanine degradation III,
ornithine biosynthesis,
glutathione-mediated detoxification II,
pyrimidine ribonucleotides interconversion,
indole glucosinolate breakdown (active in intact plant cell),
aspartate degradation II,
glucosinolate biosynthesis from trihomomethionine,
glucosinolate biosynthesis from tetrahomomethionine,
L-glutamine biosynthesis II (tRNA-dependent),
camalexin biosynthesis,
glutathione biosynthesis,
aspartate biosynthesis,
leucine degradation I,
glutathione degradation,
pyridine nucleotide cycling (plants),
glutamate degradation I,
valine biosynthesis,
glucosinolate biosynthesis from tryptophan,
arginine biosynthesis II (acetyl cycle),
isoleucine biosynthesis I (from threonine),
arginine biosynthesis I,
arginine degradation I (arginase pathway),
glucosinolate biosynthesis from hexahomomethionine,
tetrapyrrole biosynthesis I,
alanine degradation III,
pyridoxal 5'-phosphate biosynthesis II,
glutamate biosynthesis IV,
glutamate degradation IV,
asparagine biosynthesis I,
histidine biosynthesis,
lysine degradation II,
pantothenate biosynthesis,
isoleucine degradation I,
folate polyglutamylation II,
glutamine biosynthesis I,
glucosinolate biosynthesis from phenylalanine,
tyrosine biosynthesis II,
nitrate reduction II (assimilatory),
alanine degradation II (to D-lactate) 		-0.63 0.33 -0.34 C0101