AT4G07920 : -
Query Information
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AGICode AT4G07920
Description transposable element gene
Gene information
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  Gene Code Description / Information Gene name Correlation link
pcc 2.5% 97.5% PPI
1 AT4G07920 transposable element gene 1 0.33 -0.29
2 AT5G45080 phloem protein 2-A6 phloem protein 2-A6, phloem
protein 2-A6		 -0.68 0.32 -0.31
3 AT2G33240 myosin XI D MYOSIN XI D, myosin XI D 0.65 0.32 -0.29
4 AT3G13400 SKU5 similar 13 SKU5 similar 13 -0.65 0.31 -0.32
5 AT1G68980 Tetratricopeptide repeat (TPR)-like superfamily protein -0.64 0.32 -0.31
6 AT1G49250 ATP-dependent DNA ligase -0.64 0.32 -0.31
7 AT2G28830 PLANT U-BOX 12 AtPUB12, PLANT U-BOX 12 0.64 0.32 -0.3
8 AT3G10780 emp24/gp25L/p24 family/GOLD family protein 0.63 0.31 -0.33
9 AT3G48900 single-stranded DNA endonuclease family protein -0.63 0.33 -0.32
10 AT5G24830 Tetratricopeptide repeat (TPR)-like superfamily protein -0.63 0.35 -0.33
11 AT2G15260 RING/U-box superfamily protein -0.63 0.31 -0.33
12 AT5G53290 cytokinin response factor 3 cytokinin response factor 3 0.62 0.32 -0.32
13 AT1G25270 nodulin MtN21 /EamA-like transporter family protein -0.62 0.3 -0.32
14 AT1G51290 F-box and associated interaction domains-containing protein -0.61 0.3 -0.31
15 AT3G42100 transposable element gene -0.6 0.31 -0.31
16 AT3G43140 transposable element gene -0.6 0.31 -0.32
17 AT3G09470 Major facilitator superfamily protein -0.6 0.3 -0.31
18 AT5G52770 Copper transport protein family -0.6 0.32 -0.3
19 AT5G01310 APRATAXIN-like APRATAXIN-like -0.6 0.33 -0.29
20 AT1G56610 Protein with RNI-like/FBD-like domains 0.59 0.31 -0.32
21 AT3G43120 SAUR-like auxin-responsive protein family -0.59 0.32 -0.31
22 AT3G19460 Reticulon family protein -0.58 0.31 -0.3
23 AT3G48080 alpha/beta-Hydrolases superfamily protein 0.58 0.33 -0.3
24 AT4G29200 Beta-galactosidase related protein 0.58 0.31 -0.32
25 AT4G08380 Proline-rich extensin-like family protein 0.58 0.33 -0.33
26 AT3G42730 transposable element gene 0.57 0.33 -0.32
27 AT5G59800 methyl-CPG-binding domain 7 ARABIDOPSIS THALIANA
METHYL-CPG-BINDING DOMAIN 7,
methyl-CPG-binding domain 7		 -0.56 0.3 -0.32
28 AT1G67370 DNA-binding HORMA family protein ASYNAPTIC 1, ATASY1 0.55 0.32 -0.32
29 AT5G19380 CRT (chloroquine-resistance transporter)-like transporter 1 CRT (chloroquine-resistance
transporter)-like transporter 1		 -0.55 0.32 -0.31
30 AT1G72500 LOCATED IN: plasma membrane; EXPRESSED IN: 23 plant
structures; EXPRESSED DURING: 13 growth stages; CONTAINS
InterPro DOMAIN/s: von Willebrand factor, type A
(InterPro:IPR002035); BEST Arabidopsis thaliana protein
match is: inter-alpha-trypsin inhibitor heavy chain-related
(TAIR:AT1G19110.1); Has 1407 Blast hits to 1406 proteins in
307 species: Archae - 6; Bacteria - 522; Metazoa - 484;
Fungi - 59; Plants - 110; Viruses - 0; Other Eukaryotes -
226 (source: NCBI BLink).		 -0.55 0.31 -0.3
31 AT2G05870 transposable element gene -0.55 0.31 -0.31
32 AT2G07630 transposable element gene -0.55 0.31 -0.3
33 AT5G46730 glycine-rich protein 0.55 0.31 -0.3
34 AT1G08990 plant glycogenin-like starch initiation protein 5 plant glycogenin-like starch
initiation protein 5		 0.55 0.31 -0.3
35 AT4G11510 ralf-like 28 ralf-like 28 -0.54 0.3 -0.31
36 AT3G02670 Glycine-rich protein family 0.54 0.32 -0.34
37 AT3G32090 WRKY family transcription factor 0.54 0.29 -0.3
38 AT1G16130 wall associated kinase-like 2 wall associated kinase-like 2 0.54 0.3 -0.31
39 AT3G12910 NAC (No Apical Meristem) domain transcriptional regulator
superfamily protein		 0.54 0.31 -0.31
40 AT4G05640 transposable element gene 0.54 0.29 -0.31
41 AT4G25380 stress-associated protein 10 Arabidopsis thaliana
stress-associated protein 10,
stress-associated protein 10		 0.54 0.33 -0.3
42 AT2G29800 Galactose oxidase/kelch repeat superfamily protein -0.53 0.31 -0.32
43 AT5G54700 Ankyrin repeat family protein 0.53 0.31 -0.31
44 AT1G18290 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: N-terminal protein myristoylation; LOCATED IN:
chloroplast; EXPRESSED IN: root; Has 94 Blast hits to 94
proteins in 12 species: Archae - 0; Bacteria - 0; Metazoa -
0; Fungi - 0; Plants - 94; Viruses - 0; Other Eukaryotes -
0 (source: NCBI BLink).		 0.53 0.32 -0.33
45 AT5G42440 Protein kinase superfamily protein 0.53 0.31 -0.32
46 AT2G41060 RNA-binding (RRM/RBD/RNP motifs) family protein -0.53 0.31 -0.31
47 AT1G47540 Scorpion toxin-like knottin superfamily protein 0.53 0.31 -0.33
48 AT4G07840 transposable element gene -0.53 0.32 -0.33
49 AT5G16610 unknown protein; Has 30201 Blast hits to 17322 proteins in
780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338;
Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes
- 2996 (source: NCBI BLink).		 -0.53 0.31 -0.32
50 AT3G29300 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
endomembrane system; EXPRESSED IN: 12 plant structures;
EXPRESSED DURING: 6 growth stages; Has 451 Blast hits to
349 proteins in 91 species: Archae - 0; Bacteria - 85;
Metazoa - 81; Fungi - 88; Plants - 18; Viruses - 1; Other
Eukaryotes - 178 (source: NCBI BLink).		 0.52 0.3 -0.32
51 AT5G40990 GDSL lipase 1 GDSL lipase 1 0.52 0.3 -0.32
52 AT4G17220 microtubule-associated proteins 70-5 microtubule-associated proteins
70-5, microtubule-associated
proteins 70-5		 0.52 0.33 -0.3
53 AT1G08700 Presenilin-1 Presenilin-1 0.52 0.32 -0.31
54 AT2G36090 F-box family protein 0.52 0.3 -0.3
55 AT2G14060 S-adenosyl-L-methionine-dependent methyltransferases
superfamily protein		 -0.52 0.32 -0.32
56 AT1G24640 transposable element gene -0.52 0.32 -0.31
57 AT1G21220 transposable element gene 0.51 0.28 -0.32
58 AT3G21470 Pentatricopeptide repeat (PPR-like) superfamily protein 0.51 0.32 -0.3
59 AT2G44010 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT3G59880.1); Has 18 Blast hits
to 18 proteins in 7 species: Archae - 0; Bacteria - 0;
Metazoa - 0; Fungi - 0; Plants - 18; Viruses - 0; Other
Eukaryotes - 0 (source: NCBI BLink).		 0.51 0.3 -0.31
60 AT5G22980 serine carboxypeptidase-like 47 serine carboxypeptidase-like 47 -0.51 0.29 -0.32
61 AT2G45780 other RNA -0.51 0.32 -0.31
62 AT5G64210 alternative oxidase 2 alternative oxidase 2 0.51 0.3 -0.29
63 AT3G56250 unknown protein; Has 109 Blast hits to 83 proteins in 41
species: Archae - 0; Bacteria - 6; Metazoa - 18; Fungi -
20; Plants - 21; Viruses - 0; Other Eukaryotes - 44
(source: NCBI BLink).		 0.5 0.33 -0.3
64 AT5G25750 unknown protein; Has 1807 Blast hits to 1807 proteins in
277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi
- 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339
(source: NCBI BLink).		 0.5 0.3 -0.31
65 AT3G57220 Glycosyl transferase family 4 protein -0.5 0.32 -0.31
66 AT3G49070 Protein of unknown function (DUF677) 0.5 0.3 -0.31
67 AT1G02420 Pentatricopeptide repeat (PPR) superfamily protein -0.5 0.32 -0.31
68 AT3G52160 3-ketoacyl-CoA synthase 15 3-ketoacyl-CoA synthase 15 0.5 0.32 -0.34
69 AT1G10680 P-glycoprotein 10 ATP-binding cassette B10,
P-glycoprotein 10		 -0.5 0.32 -0.32
70 AT5G38035 transposable element gene -0.5 0.32 -0.32
Metabolite information
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  CID Metabolite name Pathway Information Correlation link
Compound name Stereochemistry Aracyc name pcc 2.5% 97.5% PPI
71 C0016 S-Adenosylmethionine S-Adenosyl-L-methionine S-Adenosyl-L-methionine ethylene biosynthesis I (plants),
scopoletin biosynthesis,
quercetinsulphates biosynthesis,
siroheme biosynthesis,
gibberellin inactivation II (methylation),
suberin biosynthesis,
volatile benzenoid biosynthesis I (ester formation),
S-adenosyl-L-methionine cycle II,
methylhalides biosynthesis (plants),
S-methylmethionine cycle,
ubiquinol-9 biosynthesis (eukaryotic),
nicotianamine biosynthesis,
methionine biosynthesis II,
spermine biosynthesis,
choline biosynthesis II,
diphthamide biosynthesis,
homogalacturonan biosynthesis,
phosphatidylcholine biosynthesis II,
methylquercetin biosynthesis,
plastoquinol biosynthesis,
chlorophyllide a biosynthesis I,
ferulate and sinapate biosynthesis,
ubiquinol-10 biosynthesis (eukaryotic),
phenylpropanoid biosynthesis,
free phenylpropanoid acid biosynthesis,
seleno-amino acid detoxification and volatilization I,
plant sterol biosynthesis,
lipoate biosynthesis and incorporation I,
methyl indole-3-acetate interconversion,
cyclopropane and cyclopropene fatty acid biosynthesis,
spermidine biosynthesis I,
thiamine biosynthesis II,
methionine salvage pathway,
spermidine hydroxycinnamic acid conjugates biosynthesis,
simple coumarins biosynthesis,
phosphatidylcholine biosynthesis IV,
glutathione-mediated detoxification II,
S-adenosyl-L-methionine biosynthesis,
methionine degradation I (to homocysteine),
phosphatidylcholine biosynthesis III,
phylloquinol biosynthesis,
choline biosynthesis I,
biotin biosynthesis II,
vitamin E biosynthesis 		-0.8 0.45 -0.43 C0016