AGICode | AT4G08140 |
Description | BEST Arabidopsis thaliana protein match is: 26S proteasome regulatory subunit S2 1A (TAIR:AT2G20580.1); Has 381 Blast hits to 381 proteins in 170 species: Archae - 0; Bacteria - 0; Metazoa - 138; Fungi - 132; Plants - 58; Viruses - 0; Other Eukaryotes - 53 (source: NCBI BLink). |
Gene Code | Description / Information | Gene name | Correlation | link | ||||
---|---|---|---|---|---|---|---|---|
pcc | 2.5% | 97.5% | PPI | |||||
1 | AT4G08140 | BEST Arabidopsis thaliana protein match is: 26S proteasome regulatory subunit S2 1A (TAIR:AT2G20580.1); Has 381 Blast hits to 381 proteins in 170 species: Archae - 0; Bacteria - 0; Metazoa - 138; Fungi - 132; Plants - 58; Viruses - 0; Other Eukaryotes - 53 (source: NCBI BLink). |
1 | 0.31 | -0.32 | |||
2 | AT3G23270 | Regulator of chromosome condensation (RCC1) family with FYVE zinc finger domain |
0.57 | 0.32 | -0.34 | |||
3 | AT1G06580 | Pentatricopeptide repeat (PPR) superfamily protein | 0.57 | 0.32 | -0.32 | |||
4 | AT2G35570 | pseudogene, serpin (serine protease inhibitor) family, similar to phloem serpin-1 (Cucurbita maxima) GI:9937311; blastp match of 49% identity and 9.9e-85 P-value to GP|26224736|gb|AAN76362.1||AY158152 serpin-like protein {Citrus x paradisi} |
0.55 | 0.32 | -0.3 | |||
5 | AT2G33100 | cellulose synthase-like D1 | cellulose synthase-like D1, cellulose synthase-like D1, CELLULOSE-SYNTHASE LIKE D1 |
-0.54 | 0.32 | -0.32 | ||
6 | AT3G55550 | Concanavalin A-like lectin protein kinase family protein | -0.54 | 0.33 | -0.33 | |||
7 | AT1G20290 | SWI-SNF-related chromatin binding protein | -0.54 | 0.31 | -0.32 | |||
8 | AT1G11220 | Protein of unknown function (DUF761) | 0.53 | 0.32 | -0.31 | |||
9 | AT2G10380 | transposable element gene | 0.52 | 0.28 | -0.31 | |||
10 | AT3G43170 | unknown protein; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF295 (InterPro:IPR005174); BEST Arabidopsis thaliana protein match is: Protein of unknown function (DUF295) (TAIR:AT5G54330.1); Has 90 Blast hits to 90 proteins in 2 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 90; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). |
0.52 | 0.29 | -0.32 | |||
11 | AT1G07690 | FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: root; CONTAINS InterPro DOMAIN/s: Orthoreovirus membrane fusion p10 (InterPro:IPR009854); BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G54950.1); Has 11 Blast hits to 11 proteins in 4 species: Archae - 0; Bacteria - 2; Metazoa - 0; Fungi - 0; Plants - 7; Viruses - 0; Other Eukaryotes - 2 (source: NCBI BLink). |
-0.52 | 0.32 | -0.3 | |||
12 | AT3G58210 | TRAF-like family protein | 0.51 | 0.31 | -0.3 | |||
13 | AT2G26850 | F-box family protein | 0.51 | 0.31 | -0.33 | |||
14 | AT4G29600 | Cytidine/deoxycytidylate deaminase family protein | 0.5 | 0.34 | -0.31 | |||
15 | AT3G14510 | Polyprenyl synthetase family protein | -0.49 | 0.3 | -0.32 | |||
16 | AT3G30180 | brassinosteroid-6-oxidase 2 | brassinosteroid-6-oxidase 2, CYP85A2 |
0.49 | 0.31 | -0.3 | ||
17 | AT5G57580 | Calmodulin-binding protein | 0.47 | 0.3 | -0.33 | |||
18 | AT4G02250 | Plant invertase/pectin methylesterase inhibitor superfamily protein |
0.47 | 0.3 | -0.31 | |||
19 | AT4G17200 | F-box and associated interaction domains-containing protein | -0.47 | 0.33 | -0.31 | |||
20 | AT3G43690 | transposable element gene | 0.47 | 0.32 | -0.31 | |||
21 | AT1G62670 | rna processing factor 2 | rna processing factor 2 | 0.46 | 0.29 | -0.32 | ||
22 | AT4G25200 | mitochondrion-localized small heat shock protein 23.6 | mitochondrion-localized small heat shock protein 23.6, mitochondrion-localized small heat shock protein 23.6 |
-0.46 | 0.31 | -0.32 | ||
23 | AT2G30480 | unknown protein; Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). |
-0.45 | 0.31 | -0.32 | |||
24 | AT2G27650 | Ubiquitin carboxyl-terminal hydrolase-related protein | -0.44 | 0.31 | -0.31 | |||
25 | AT3G52620 | unknown protein; Has 11 Blast hits to 11 proteins in 5 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 11; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). |
-0.43 | 0.28 | -0.32 | |||
26 | AT5G50030 | Plant invertase/pectin methylesterase inhibitor superfamily protein |
-0.43 | 0.3 | -0.31 | |||
27 | AT5G36190 | FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; BEST Arabidopsis thaliana protein match is: F-box and associated interaction domains-containing protein (TAIR:AT5G36200.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). |
0.41 | 0.3 | -0.33 | |||
28 | AT1G55790 | Domain of unknown function (DUF2431) | -0.39 | 0.33 | -0.31 |