AT4G07450 : -
Cytoscape Web will replace the contents of this div with your graph.
AGICode AT4G07450
Description transposable element gene
Gene information
Help   
  Gene Code Description / Information Gene name Correlation link
pcc 2.5% 97.5% PPI
1 AT4G07450 transposable element gene 1 0.32 -0.3
2 AT5G65170 VQ motif-containing protein -0.74 0.33 -0.31
3 AT5G50300 Xanthine/uracil permease family protein ARABIDOPSIS THALIANA AZA-GUANINE
RESISTANT2, AZA-GUANINE RESISTANT2
-0.68 0.31 -0.34
4 AT3G27150 Galactose oxidase/kelch repeat superfamily protein -0.68 0.33 -0.32
5 AT1G51640 exocyst subunit exo70 family protein G2 exocyst subunit exo70 family
protein G2, exocyst subunit exo70
family protein G2
-0.67 0.32 -0.3
6 AT2G30840 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase
superfamily protein
-0.66 0.33 -0.33
7 AT4G39590 Galactose oxidase/kelch repeat superfamily protein 0.66 0.31 -0.32
8 AT2G01090 Ubiquinol-cytochrome C reductase hinge protein 0.66 0.31 -0.3
9 AT1G80240 Protein of unknown function, DUF642 -0.65 0.33 -0.3
10 AT4G04690 F-box and associated interaction domains-containing protein 0.65 0.32 -0.32
11 AT3G42390 unknown protein; Has 1 Blast hits to 1 proteins in 1
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 1; Viruses - 0; Other Eukaryotes - 0 (source: NCBI
BLink).
0.65 0.31 -0.32
12 AT3G04170 RmlC-like cupins superfamily protein 0.64 0.32 -0.31
13 AT4G28380 Leucine-rich repeat (LRR) family protein 0.64 0.3 -0.31
14 AT1G36810 transposable element gene 0.64 0.32 -0.3
15 AT2G17080 Arabidopsis protein of unknown function (DUF241) -0.64 0.33 -0.29
16 AT3G30190 transposable element gene -0.63 0.32 -0.32
17 AT5G37980 Zinc-binding dehydrogenase family protein 0.63 0.32 -0.32
18 AT2G03130 Ribosomal protein L12/ ATP-dependent Clp protease adaptor
protein ClpS family protein
0.62 0.31 -0.33
19 AT5G10090 Tetratricopeptide repeat (TPR)-like superfamily protein tetratricopeptide repeat 13 0.62 0.31 -0.33
20 AT5G13560 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT2G37370.1); Has 12055 Blast
hits to 8846 proteins in 811 species: Archae - 217;
Bacteria - 1046; Metazoa - 6104; Fungi - 1115; Plants -
528; Viruses - 14; Other Eukaryotes - 3031 (source: NCBI
BLink).
-0.61 0.32 -0.3
21 AT3G48960 Ribosomal protein L13e family protein -0.61 0.32 -0.32
22 AT4G15400 HXXXD-type acyl-transferase family protein -0.61 0.32 -0.32
23 AT2G46940 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT3G62070.1); Has 143 Blast hits
to 141 proteins in 14 species: Archae - 0; Bacteria - 0;
Metazoa - 4; Fungi - 0; Plants - 139; Viruses - 0; Other
Eukaryotes - 0 (source: NCBI BLink).
-0.61 0.3 -0.33
24 AT4G39720 VQ motif-containing protein -0.6 0.33 -0.33
25 AT2G39380 exocyst subunit exo70 family protein H2 exocyst subunit exo70 family
protein H2, exocyst subunit exo70
family protein H2
-0.6 0.33 -0.31
26 AT3G30750 transposable element gene 0.6 0.31 -0.3
27 AT1G31640 AGAMOUS-like 92 AGAMOUS-like 92 0.6 0.36 -0.31
28 AT1G18530 EF hand calcium-binding protein family 0.6 0.32 -0.33
29 AT4G33130 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
chloroplast; EXPRESSED IN: 9 plant structures; EXPRESSED
DURING: 6 growth stages; BEST Arabidopsis thaliana protein
match is: Protein of unknown function, DUF547
(TAIR:AT1G16750.1); Has 192 Blast hits to 192 proteins in
18 species: Archae - 0; Bacteria - 0; Metazoa - 1; Fungi -
0; Plants - 189; Viruses - 0; Other Eukaryotes - 2 (source:
NCBI BLink).
-0.59 0.29 -0.35
30 AT3G23060 RING/U-box superfamily protein -0.59 0.33 -0.31
31 AT1G21510 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: N-terminal protein myristoylation; LOCATED IN:
cellular_component unknown; EXPRESSED IN: cotyledon; Has
380 Blast hits to 286 proteins in 63 species: Archae - 0;
Bacteria - 6; Metazoa - 254; Fungi - 44; Plants - 13;
Viruses - 5; Other Eukaryotes - 58 (source: NCBI BLink).
0.59 0.31 -0.31
32 AT1G75930 extracellular lipase 6 extracellular lipase 6 0.59 0.3 -0.34
33 AT4G09940 P-loop containing nucleoside triphosphate hydrolases
superfamily protein
-0.59 0.33 -0.31
34 AT1G42700 FUNCTIONS IN: molecular_function unknown; INVOLVED IN:
response to cold; LOCATED IN: nucleus; BEST Arabidopsis
thaliana protein match is: Plant transposase (Ptta/En/Spm
family) (TAIR:AT1G40087.1); Has 10 Blast hits to 10
proteins in 3 species: Archae - 0; Bacteria - 0; Metazoa -
0; Fungi - 0; Plants - 10; Viruses - 0; Other Eukaryotes -
0 (source: NCBI BLink).
-0.59 0.31 -0.29
35 AT4G18890 BES1/BZR1 homolog 3 BES1/BZR1 homolog 3 -0.58 0.32 -0.32
36 AT4G15350 cytochrome P450, family 705, subfamily A, polypeptide 2 cytochrome P450, family 705,
subfamily A, polypeptide 2
-0.58 0.3 -0.31
37 AT1G21780 BTB/POZ domain-containing protein 0.58 0.32 -0.29
38 AT4G27780 acyl-CoA binding protein 2 acyl-CoA binding protein 2 -0.58 0.34 -0.33
39 AT4G38670 Pathogenesis-related thaumatin superfamily protein 0.58 0.31 -0.33
40 AT4G15320 cellulose synthase-like B6 cellulose synthase-like B6,
CELLULOSE SYNTHASE LIKE B6,
CSLB06, cellulose synthase-like B6
0.57 0.34 -0.31
41 AT3G13782 nucleosome assembly protein1;4 nucleosome assembly protein1;4,
NUCLEOSOME/CHROMATIN ASSEMBLY
FACTOR GROUP A 04,
NUCLEOSOME/CHROMATIN ASSEMBLY
FACTOR GROUP A 4
-0.57 0.32 -0.31
42 AT2G11150 transposable element gene -0.57 0.33 -0.31
43 AT4G29990 Leucine-rich repeat transmembrane protein kinase protein 0.57 0.33 -0.31
44 AT3G63230 Protein of unknown function (DUF581) 0.57 0.32 -0.31
45 AT3G53820 C2H2 and C2HC zinc fingers superfamily protein -0.57 0.31 -0.32
46 AT5G49050 FUNCTIONS IN: molecular_function unknown; INVOLVED IN:
response to stress; LOCATED IN: cellular_component unknown;
CONTAINS InterPro DOMAIN/s: UspA (InterPro:IPR006016),
Rossmann-like alpha/beta/alpha sandwich fold
(InterPro:IPR014729); BEST Arabidopsis thaliana protein
match is: Adenine nucleotide alpha hydrolases-like
superfamily protein (TAIR:AT2G47710.1); Has 1807 Blast hits
to 1807 proteins in 277 species: Archae - 0; Bacteria - 0;
Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0;
Other Eukaryotes - 339 (source: NCBI BLink).
0.57 0.31 -0.33
47 AT1G35370 transposable element gene 0.56 0.29 -0.32
48 AT3G15430 Regulator of chromosome condensation (RCC1) family protein -0.56 0.3 -0.3
49 AT5G24240 Phosphatidylinositol 3- and 4-kinase ;Ubiquitin family
protein
0.56 0.31 -0.32
50 AT1G14110 fucosyltransferase 9 ATFUT9, fucosyltransferase 9 -0.56 0.34 -0.3
51 AT1G13680 PLC-like phosphodiesterases superfamily protein -0.56 0.31 -0.31
52 AT1G33460 transposable element gene 0.56 0.32 -0.32
53 AT2G25340 vesicle-associated membrane protein 712 vesicle-associated membrane
protein 712, VAMP712,
vesicle-associated membrane
protein 712
0.56 0.32 -0.32
54 AT1G53930 Ubiquitin-like superfamily protein 0.56 0.31 -0.32
55 AT1G05770 Mannose-binding lectin superfamily protein 0.56 0.29 -0.31
56 AT4G33800 unknown protein; Has 30201 Blast hits to 17322 proteins in
780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338;
Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes
- 2996 (source: NCBI BLink).
-0.56 0.32 -0.32
57 AT3G09130 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT3G42786.1); Has 7 Blast hits to
7 proteins in 2 species: Archae - 0; Bacteria - 0; Metazoa
- 0; Fungi - 0; Plants - 7; Viruses - 0; Other Eukaryotes -
0 (source: NCBI BLink).
-0.56 0.31 -0.3
58 AT4G36105 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
nucleus; EXPRESSED IN: 6 plant structures; EXPRESSED
DURING: LP.04 four leaves visible, 4 anthesis, petal
differentiation and expansion stage; BEST Arabidopsis
thaliana protein match is: unknown protein
(TAIR:AT2G17990.1); Has 30201 Blast hits to 17322 proteins
in 780 species: Archae - 12; Bacteria - 1396; Metazoa -
17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other
Eukaryotes - 2996 (source: NCBI BLink).
-0.56 0.31 -0.31
59 AT5G22410 root hair specific 18 root hair specific 18 -0.55 0.31 -0.31
60 AT4G35010 beta-galactosidase 11 beta-galactosidase 11 0.55 0.33 -0.32
61 AT5G34895 transposable element gene 0.55 0.29 -0.3
62 AT3G60410 Protein of unknown function (DUF1639) 0.55 0.3 -0.3
63 AT5G65590 Dof-type zinc finger DNA-binding family protein 0.55 0.32 -0.32
64 AT3G50990 Peroxidase superfamily protein -0.55 0.31 -0.3
65 AT2G28580 Plant protein of unknown function (DUF247) 0.55 0.32 -0.33
66 ATMG00740 hypothetical protein ORF100A 0.55 0.31 -0.31
67 AT4G25790 CAP (Cysteine-rich secretory proteins, Antigen 5, and
Pathogenesis-related 1 protein) superfamily protein
-0.55 0.32 -0.31
68 AT1G20530 Protein of unknown function (DUF630 and DUF632) 0.55 0.33 -0.32
69 AT1G80740 chromomethylase 1 chromomethylase 1, DNA
METHYLTRANSFERASE 4
0.55 0.32 -0.3
70 AT3G44570 Arabidopsis retrotransposon ORF-1 protein 0.55 0.31 -0.33
71 AT1G56150 SAUR-like auxin-responsive protein family 0.55 0.32 -0.31
72 AT3G30150 transposable element gene 0.55 0.32 -0.32
73 AT1G06320 unknown protein; Has 24 Blast hits to 24 proteins in 10
species: Archae - 0; Bacteria - 2; Metazoa - 0; Fungi - 0;
Plants - 20; Viruses - 0; Other Eukaryotes - 2 (source:
NCBI BLink).
-0.54 0.32 -0.32
74 AT3G24260 FUNCTIONS IN: molecular_function unknown; INVOLVED IN:
biological_process unknown; LOCATED IN: chloroplast;
CONTAINS InterPro DOMAIN/s: Histone deacetylase interacting
(InterPro:IPR013194); BEST Arabidopsis thaliana protein
match is: unknown protein (TAIR:AT3G28870.1); Has 220 Blast
hits to 218 proteins in 65 species: Archae - 7; Bacteria -
6; Metazoa - 43; Fungi - 2; Plants - 115; Viruses - 0;
Other Eukaryotes - 47 (source: NCBI BLink).
0.54 0.3 -0.31
75 AT3G23960 F-box and associated interaction domains-containing protein 0.54 0.31 -0.31
76 AT3G26614 transposable element gene -0.54 0.33 -0.33
77 AT5G03980 SGNH hydrolase-type esterase superfamily protein 0.54 0.33 -0.31
78 AT2G07190 Domain of unknown function (DUF1985) 0.54 0.3 -0.29
79 AT3G05830 Encodes alpha-helical IF (intermediate filament)-like
protein.
-0.54 0.33 -0.33
80 ATMG01410 open reading frame 204 open reading frame 204 0.54 0.32 -0.31
81 AT4G32630 ArfGap/RecO-like zinc finger domain-containing protein 0.54 0.32 -0.32
82 AT5G09640 serine carboxypeptidase-like 19 serine carboxypeptidase-like 19,
SINAPOYLGLUCOSE ACCUMULATOR 2
0.54 0.31 -0.33
83 AT5G52620 F-box associated ubiquitination effector family protein 0.53 0.31 -0.29
84 AT3G45390 Concanavalin A-like lectin protein kinase family protein 0.53 0.31 -0.33
85 AT2G38150 alpha 1,4-glycosyltransferase family protein 0.53 0.32 -0.32
86 AT3G09280 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
endomembrane system; EXPRESSED IN: root; Has 31 Blast hits
to 31 proteins in 9 species: Archae - 0; Bacteria - 0;
Metazoa - 0; Fungi - 0; Plants - 31; Viruses - 0; Other
Eukaryotes - 0 (source: NCBI BLink).
-0.53 0.33 -0.32
87 AT5G48200 unknown protein; Has 1807 Blast hits to 1807 proteins in
277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi
- 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339
(source: NCBI BLink).
0.53 0.31 -0.32
88 AT5G59370 actin 4 actin 4 0.53 0.32 -0.31
89 AT2G19600 K+ efflux antiporter 4 K+ efflux antiporter 4, KEA4, K+
efflux antiporter 4
-0.53 0.31 -0.32
90 AT1G01410 pumilio 22 pumilio 22, pumilio 22 -0.53 0.32 -0.3
91 AT1G48390 RNI-like superfamily protein 0.53 0.31 -0.32
92 AT1G15220 cytochrome c biogenesis protein family ATCCMH, CCMH 0.52 0.31 -0.31
93 AT4G19650 Mitochondrial transcription termination factor family
protein
0.52 0.3 -0.32
94 AT3G57630 exostosin family protein -0.52 0.31 -0.31
95 AT1G07290 golgi nucleotide sugar transporter 2 golgi nucleotide sugar transporter
2
-0.52 0.3 -0.33
96 AT1G29770 Haloacid dehalogenase-like hydrolase (HAD) superfamily
protein
0.52 0.32 -0.29