AT4G07460 : -
Query Information
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AGICode AT4G07460
Description transposable element gene
Gene information
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  Gene Code Description / Information Gene name Correlation link
pcc 2.5% 97.5% PPI
1 AT4G07460 transposable element gene 1 0.33 -0.32
2 AT5G54420 Protein of unknown function (DUF295) -0.77 0.31 -0.3
3 AT1G10010 amino acid permease 8 amino acid permease 8, ATAAP8 0.73 0.33 -0.31
4 AT4G40040 Histone superfamily protein 0.72 0.35 -0.29
5 AT4G10370 Cysteine/Histidine-rich C1 domain family protein 0.72 0.29 -0.33
6 AT5G04880 pseudogene of ABC transporter family protein -0.71 0.31 -0.34
7 AT3G42530 transposable element gene -0.71 0.3 -0.3
8 AT4G10220 Protein of Unknown Function (DUF239) -0.71 0.32 -0.29
9 AT4G21130 Transducin/WD40 repeat-like superfamily protein EMBRYO DEFECTIVE 2271 0.71 0.31 -0.32
10 AT2G19250 pseudogene, similar to Magnesium-chelatase subunit chlD,
chloroplast precursor (Mg- protoporphyrin IX chelatase)
(Mg-chelatase subunit D). (Common tobacco), similar to
SP|O24133 Magnesium-chelatase subunit chlD, chloroplast
precursor (Mg-protoporphyrin IX chelatase) (Mg-chelatase
subunit D) {Nicotiana tabacum}; blastp match of 78%
identity and 5.0e-07 P-value to SP|O24133|CHLD_TOBAC
Magnesium-chelatase subunit chlD, chloroplast precursor
(Mg- protoporphyrin IX chelatase) (Mg-chelatase subunit D).
(Common tobacco) {Nicotiana tabacum}		 -0.71 0.3 -0.31
11 AT5G61940 Ubiquitin carboxyl-terminal hydrolase-related protein -0.7 0.32 -0.34
12 AT4G03480 Ankyrin repeat family protein 0.7 0.31 -0.31
13 AT1G69990 Leucine-rich repeat protein kinase family protein -0.7 0.31 -0.34
14 AT1G30350 Pectin lyase-like superfamily protein -0.7 0.32 -0.32
15 AT2G33030 receptor like protein 25 receptor like protein 25, receptor
like protein 25		 0.7 0.3 -0.33
16 AT1G23910 Polyketide cyclase/dehydrase and lipid transport
superfamily protein		 -0.69 0.32 -0.33
17 AT1G66150 transmembrane kinase 1 transmembrane kinase 1 0.69 0.32 -0.32
18 AT5G28880 transposable element gene -0.69 0.32 -0.32
19 AT3G44770 Protein of unknown function (DUF626) -0.69 0.29 -0.3
20 AT3G21810 Zinc finger C-x8-C-x5-C-x3-H type family protein -0.69 0.31 -0.33
21 AT3G46390 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT1G32337.1); Has 5 Blast hits to
5 proteins in 1 species: Archae - 0; Bacteria - 0; Metazoa
- 0; Fungi - 0; Plants - 5; Viruses - 0; Other Eukaryotes -
0 (source: NCBI BLink).		 -0.69 0.33 -0.3
22 AT1G27820 Polynucleotidyl transferase, ribonuclease H-like
superfamily protein		 0.69 0.32 -0.3
23 AT3G29110 Terpenoid cyclases/Protein prenyltransferases superfamily
protein		 0.69 0.31 -0.32
24 AT5G37640 ubiquitin 9 ubiquitin 9 0.68 0.34 -0.33
25 AT2G13940 transposable element gene -0.68 0.32 -0.3
26 AT2G19700 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
endomembrane system; Has 5 Blast hits to 5 proteins in 2
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 5; Viruses - 0; Other Eukaryotes - 0 (source: NCBI
BLink).		 0.68 0.3 -0.3
27 AT1G54280 ATPase E1-E2 type family protein / haloacid
dehalogenase-like hydrolase family protein		 -0.68 0.3 -0.33
28 AT3G49480 Protein with RNI-like/FBD-like domains 0.68 0.32 -0.32
29 AT2G32710 Cyclin-dependent kinase inhibitor family protein CYCLIN-DEPENDENT KINASE INHIBITOR
2, INTERACTORS OF CDC2 KINASE 7,
KRP4, KIP-RELATED PROTEIN 4		 0.68 0.31 -0.31
30 AT4G04480 unknown protein; LOCATED IN: chloroplast; EXPRESSED IN:
flower, pollen tube; EXPRESSED DURING: petal
differentiation and expansion stage; BEST Arabidopsis
thaliana protein match is: F-box family protein with a
domain of unknown function (DUF295) (TAIR:AT4G22030.1); Has
78 Blast hits to 78 proteins in 10 species: Archae - 0;
Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 78; Viruses
- 0; Other Eukaryotes - 0 (source: NCBI BLink).		 -0.68 0.32 -0.3
31 AT5G15110 Pectate lyase family protein -0.68 0.29 -0.33
32 AT4G11170 Disease resistance protein (TIR-NBS-LRR class) family -0.68 0.3 -0.31
33 AT3G32100 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
chloroplast; Has 1 Blast hits to 1 proteins in 1 species:
Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants -
1; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).		 0.68 0.31 -0.33
34 AT5G02550 unknown protein; Has 3 Blast hits to 3 proteins in 1
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 3; Viruses - 0; Other Eukaryotes - 0 (source: NCBI
BLink).		 0.68 0.31 -0.31
35 AT4G18410 transposable element gene -0.68 0.33 -0.33
36 AT5G46500 BEST Arabidopsis thaliana protein match is: disease
resistance protein (TIR-NBS-LRR class) family
(TAIR:AT5G46260.1); Has 1807 Blast hits to 1807 proteins in
277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi
- 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339
(source: NCBI BLink).		 0.67 0.32 -0.31
37 AT1G09550 Pectinacetylesterase family protein -0.67 0.32 -0.3
38 AT1G62820 Calcium-binding EF-hand family protein 0.67 0.31 -0.3
39 AT5G08440 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN: plasma
membrane; EXPRESSED IN: 21 plant structures; EXPRESSED
DURING: 13 growth stages; BEST Arabidopsis thaliana protein
match is: unknown protein (TAIR:AT5G23490.1); Has 141 Blast
hits to 139 proteins in 35 species: Archae - 0; Bacteria -
9; Metazoa - 21; Fungi - 6; Plants - 94; Viruses - 0; Other
Eukaryotes - 11 (source: NCBI BLink).		 -0.67 0.32 -0.34
40 AT3G14070 cation exchanger 9 CATION CALCIUM EXCHANGER 3, cation
exchanger 9, CATION CALCIUM
EXCHANGER 3		 0.67 0.3 -0.32
41 AT3G56610 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
endomembrane system; EXPRESSED IN: embryo, sperm cell,
sepal, pedicel, synergid; EXPRESSED DURING: 4 anthesis, C
globular stage; CONTAINS InterPro DOMAIN/s: Protein of
unknown function DUF784, Arabidopsis thaliana
(InterPro:IPR008502); Has 5 Blast hits to 5 proteins in 2
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 5; Viruses - 0; Other Eukaryotes - 0 (source: NCBI
BLink).		 -0.67 0.31 -0.33
42 AT5G52160 Bifunctional inhibitor/lipid-transfer protein/seed storage
2S albumin superfamily protein		 -0.67 0.34 -0.29
43 AT4G15200 formin 3 formin 3, formin 3 -0.67 0.31 -0.31
44 AT2G35890 calcium-dependent protein kinase 25 calcium-dependent protein kinase
25		 0.67 0.31 -0.3
45 AT4G19370 Protein of unknown function (DUF1218) -0.67 0.33 -0.33
46 AT4G03640 transposable element gene -0.66 0.32 -0.32
47 AT5G22550 Plant protein of unknown function (DUF247) -0.66 0.31 -0.32
48 AT3G04280 response regulator 22 response regulator 22, response
regulator 22		 0.66 0.31 -0.31
49 AT1G43140 Cullin family protein -0.66 0.32 -0.32
50 AT3G44270 transposable element gene 0.66 0.32 -0.33
51 AT5G49945 Protein of unknown function (DUF1682) 0.66 0.32 -0.33
52 AT1G19060 Protein of unknown function (DUF626) -0.66 0.29 -0.32
53 AT1G31600 RNA-binding (RRM/RBD/RNP motifs) family protein Arabidopsis thaliana tRNA
methyltransferase 9, tRNA
methyltransferase 9		 -0.65 0.3 -0.29
54 AT1G67420 Zn-dependent exopeptidases superfamily protein -0.65 0.32 -0.32
55 AT5G24560 phloem protein 2-B12 phloem protein 2-B12, phloem
protein 2-B12		 -0.65 0.32 -0.32
56 AT4G18420 transposable element gene -0.65 0.3 -0.31
57 AT3G59410 protein kinase family protein ARABIDOPSIS THALIANA GENERAL
CONTROL NON-REPRESSIBLE 2, GENERAL
CONTROL NON-REPRESSIBLE 2		 -0.65 0.33 -0.35
58 AT1G43260 hAT transposon superfamily protein -0.65 0.33 -0.3
59 AT1G02580 SET domain-containing protein EMBRYO DEFECTIVE 173,
FERTILIZATION INDEPENDENT SEED 1,
MEDEA, SET DOMAIN-CONTAINING
PROTEIN 5		 -0.65 0.31 -0.3
60 AT5G28070 unknown protein; Has 1807 Blast hits to 1807 proteins in
277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi
- 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339
(source: NCBI BLink).		 0.65 0.32 -0.3
61 AT3G57970 Emsy N Terminus (ENT)/ plant Tudor-like domains-containing
protein		 0.65 0.33 -0.32
62 AT2G16210 Transcriptional factor B3 family protein -0.65 0.34 -0.31
63 AT3G18900 FUNCTIONS IN: molecular_function unknown; INVOLVED IN:
biological_process unknown; LOCATED IN: cellular_component
unknown; EXPRESSED IN: synergid; CONTAINS InterPro
DOMAIN/s: F-box associated domain, type 1
(InterPro:IPR006527), F-box associated interaction domain
(InterPro:IPR017451), Protein of unknown function DUF547
(InterPro:IPR006869); BEST Arabidopsis thaliana protein
match is: Protein of unknown function, DUF547
(TAIR:AT5G66600.3).		 -0.65 0.32 -0.33
64 AT1G76710 SET domain group 26 ASH1 RELATED PROTEIN 1,
ASH1-RELATED PROTEIN 1, SET domain
group 26		 -0.65 0.3 -0.34
65 AT1G59535 unknown protein; Has 2 Blast hits to 2 proteins in 1
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 2; Viruses - 0; Other Eukaryotes - 0 (source: NCBI
BLink).		 0.64 0.31 -0.31
66 AT5G02410 DIE2/ALG10 family homolog of yeast ALG10 -0.64 0.32 -0.32
67 AT4G04300 transposable element gene 0.64 0.32 -0.33
68 AT5G19660 SITE-1 protease SITE-1 PROTEASE, ATSBT6.1, SITE-1
protease		 -0.64 0.31 -0.32
69 ATMG00400 hypothetical protein ORF157 -0.64 0.33 -0.3
70 AT5G12180 calcium-dependent protein kinase 17 calcium-dependent protein kinase
17		 -0.64 0.31 -0.31
71 AT2G47560 RING/U-box superfamily protein 0.64 0.31 -0.32
72 AT2G11590 transposable element gene -0.64 0.3 -0.31
73 AT3G62660 galacturonosyltransferase-like 7 galacturonosyltransferase-like 7 0.64 0.34 -0.29
74 AT1G57780 heavy-metal-associated domain-containing protein 0.64 0.32 -0.32
75 AT5G42400 SET domain protein 25 ARABIDOPSIS TRITHORAX-RELATED7,
SET domain protein 25		 -0.64 0.31 -0.31
76 AT3G33064 transposable element gene 0.64 0.33 -0.32
77 AT4G39400 Leucine-rich receptor-like protein kinase family protein ATBRI1, BR INSENSITIVE 1,
BRASSINOSTEROID INSENSITIVE 1,
CABBAGE 2, DWARF 2		 0.63 0.31 -0.32
78 AT5G58280 AP2/B3-like transcriptional factor family protein 0.63 0.29 -0.31
79 AT1G20400 Protein of unknown function (DUF1204) 0.63 0.31 -0.31
80 AT1G36910 transposable element gene 0.63 0.31 -0.3
81 AT4G08790 Nitrilase/cyanide hydratase and apolipoprotein
N-acyltransferase family protein		 -0.63 0.3 -0.33
82 AT3G01490 Protein kinase superfamily protein 0.63 0.33 -0.31
83 AT3G29690 HXXXD-type acyl-transferase family protein 0.63 0.32 -0.33
84 AT5G12460 Protein of unknown function (DUF604) -0.63 0.33 -0.33
85 AT4G12350 myb domain protein 42 myb domain protein 42, myb domain
protein 42		 -0.63 0.31 -0.32
86 AT3G54010 FKBP-type peptidyl-prolyl cis-trans isomerase family
protein		 DEI1, PASTICCINO 1 -0.63 0.31 -0.33
87 AT1G56290 CwfJ-like family protein 0.62 0.33 -0.32
88 AT4G13320 unknown protein; Has 68 Blast hits to 67 proteins in 12
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 68; Viruses - 0; Other Eukaryotes - 0 (source:
NCBI BLink).		 0.62 0.3 -0.3
89 AT4G18850 unknown protein; Has 6 Blast hits to 6 proteins in 2
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 6; Viruses - 0; Other Eukaryotes - 0 (source: NCBI
BLink).		 0.62 0.33 -0.29
90 AT3G06190 BTB-POZ and MATH domain 2 BTB-POZ AND MATH DOMAIN 2, BTB-POZ
and MATH domain 2		 0.62 0.3 -0.32
91 AT3G25260 Major facilitator superfamily protein -0.62 0.33 -0.3
92 AT5G25820 Exostosin family protein -0.62 0.3 -0.29
93 AT1G73510 unknown protein; Has 7 Blast hits to 7 proteins in 2
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 7; Viruses - 0; Other Eukaryotes - 0 (source: NCBI
BLink).		 0.62 0.32 -0.31
94 AT1G28560 snRNA activating complex family protein SHOOT REDIFFERENTIATION DEFECTIVE
2		 -0.62 0.31 -0.32
95 AT5G37420 Family of unknown function (DUF577) -0.62 0.32 -0.31
96 ATMG00820 Reverse transcriptase (RNA-dependent DNA polymerase) ORF170 -0.62 0.32 -0.32
97 AT1G24010 Polyketide cyclase/dehydrase and lipid transport
superfamily protein		 -0.62 0.32 -0.3
98 AT1G26760 SET domain protein 35 ATXR1, SET domain protein 35 -0.62 0.33 -0.32
99 AT4G14815 Bifunctional inhibitor/lipid-transfer protein/seed storage
2S albumin superfamily protein		 0.62 0.35 -0.3
100 AT1G01450 Protein kinase superfamily protein -0.62 0.32 -0.31
101 AT3G42850 Mevalonate/galactokinase family protein -0.61 0.32 -0.3
102 AT4G20200 Terpenoid cyclases/Protein prenyltransferases superfamily
protein		 -0.61 0.31 -0.32
103 AT4G35820 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase
superfamily protein		 -0.61 0.3 -0.3
104 AT5G58850 myb domain protein 119 MYB DOMAIN PROTEIN 119, myb domain
protein 119		 0.61 0.3 -0.31
105 AT1G50180 NB-ARC domain-containing disease resistance protein -0.61 0.32 -0.33
106 AT5G13130 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
family protein		 0.61 0.31 -0.31
107 AT1G27650 U2 snRNP auxiliary factor small subunit, putative ATU2AF35A 0.61 0.31 -0.31
108 AT1G34590 transposable element gene -0.61 0.31 -0.31
109 AT4G09100 RING/U-box superfamily protein -0.61 0.32 -0.31
110 AT2G03170 SKP1-like 14 SKP1-like 14, SKP1-like 14 -0.61 0.31 -0.29
111 AT4G18710 Protein kinase superfamily protein SHAGGY-LIKE KINASE 21,
BRASSINOSTEROID-INSENSITIVE 2,
DWARF 12, SHAGGY-LIKE KINASE 21,
ULTRACURVATA 1		 0.61 0.3 -0.33
112 AT1G46336 unknown protein; Has 1 Blast hits to 1 proteins in 1
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 1; Viruses - 0; Other Eukaryotes - 0 (source: NCBI
BLink).		 -0.61 0.32 -0.3
113 AT1G33870 P-loop containing nucleoside triphosphate hydrolases
superfamily protein		 -0.61 0.3 -0.32
114 AT3G48880 RNI-like superfamily protein 0.61 0.3 -0.32
115 AT1G31240 Bromodomain transcription factor 0.61 0.29 -0.31
116 AT2G23480 transposable element gene 0.61 0.31 -0.32
117 AT1G33060 NAC 014 NAC 014, NAC 014 0.61 0.33 -0.33
118 AT1G45545 Plant protein of unknown function (DUF827) -0.61 0.3 -0.3
119 AT2G30650 ATP-dependent caseinolytic (Clp) protease/crotonase family
protein		 0.61 0.32 -0.33
120 AT1G75940 Glycosyl hydrolase superfamily protein ATA27, BETA GLUCOSIDASE 20 0.6 0.31 -0.32
121 AT3G47230 transposable element gene 0.6 0.34 -0.31
122 AT4G10950 SGNH hydrolase-type esterase superfamily protein -0.6 0.35 -0.34
123 AT3G58280 Arabidopsis phospholipase-like protein (PEARLI 4) with
TRAF-like domain		 -0.6 0.32 -0.32
124 AT1G74580 Pentatricopeptide repeat (PPR) superfamily protein -0.6 0.3 -0.3
125 AT4G39160 Homeodomain-like superfamily protein -0.6 0.32 -0.32
126 AT5G13380 Auxin-responsive GH3 family protein -0.6 0.31 -0.31
127 AT2G27380 extensin proline-rich 1 extensin proline-rich 1, extensin
proline-rich 1		 -0.6 0.3 -0.32
128 AT1G31000 F-box and associated interaction domains-containing protein -0.6 0.3 -0.31
129 AT2G29770 Galactose oxidase/kelch repeat superfamily protein -0.6 0.31 -0.31
130 AT2G36710 Pectin lyase-like superfamily protein 0.6 0.31 -0.34
131 AT3G22040 Domain of unknown function (DUF26) 0.6 0.32 -0.31
132 AT4G26170 FUNCTIONS IN: molecular_function unknown; INVOLVED IN:
biological_process unknown; LOCATED IN: chloroplast;
EXPRESSED IN: 7 plant structures; EXPRESSED DURING: F
mature embryo stage, petal differentiation and expansion
stage, E expanded cotyledon stage, D bilateral stage; BEST
Arabidopsis thaliana protein match is: effector of
transcription2 (TAIR:AT5G56780.1); Has 75 Blast hits to 42
proteins in 17 species: Archae - 0; Bacteria - 2; Metazoa -
2; Fungi - 0; Plants - 70; Viruses - 0; Other Eukaryotes -
1 (source: NCBI BLink).		 0.6 0.31 -0.33
133 AT4G32700 helicases;ATP-dependent helicases;nucleic acid binding;ATP
binding;DNA-directed DNA polymerases;DNA binding		 TEBICHI -0.6 0.33 -0.29
134 AT5G02690 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
endomembrane system; EXPRESSED IN: 11 plant structures;
EXPRESSED DURING: 9 growth stages; Has 2 Blast hits to 2
proteins in 1 species: Archae - 0; Bacteria - 0; Metazoa -
0; Fungi - 0; Plants - 2; Viruses - 0; Other Eukaryotes - 0
(source: NCBI BLink).		 -0.6 0.3 -0.31
135 AT2G21460 transposable element gene 0.6 0.33 -0.32
136 AT1G13200 F-box and associated interaction domains-containing protein -0.6 0.32 -0.32
137 AT5G07430 Pectin lyase-like superfamily protein 0.6 0.32 -0.33
138 AT3G19610 Plant protein of unknown function (DUF936) 0.6 0.32 -0.31
139 AT1G46696 Protein of unknown function, DUF601 0.6 0.33 -0.34
140 AT2G30090 Acyl-CoA N-acyltransferases (NAT) superfamily protein -0.6 0.33 -0.31
141 AT3G54310 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT2G38430.1); Has 44 Blast hits
to 41 proteins in 9 species: Archae - 0; Bacteria - 0;
Metazoa - 0; Fungi - 0; Plants - 44; Viruses - 0; Other
Eukaryotes - 0 (source: NCBI BLink).		 0.59 0.31 -0.32
142 AT1G65210 Galactose-binding protein 0.59 0.31 -0.32
143 AT1G35183 unknown protein; Has 5 Blast hits to 5 proteins in 2
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 5; Viruses - 0; Other Eukaryotes - 0 (source: NCBI
BLink).		 0.59 0.32 -0.31
144 AT5G25370 phospholipase D alpha 3 phospholipase D alpha 3 0.59 0.31 -0.33
145 AT5G59030 copper transporter 1 copper transporter 1 0.59 0.29 -0.32
146 AT4G18920 Protein of unknown function (DUF1264) 0.59 0.31 -0.31
147 AT5G18120 APR-like 7 APR-like 7, APR-like 7 0.59 0.29 -0.32
148 AT5G65370 ENTH/ANTH/VHS superfamily protein 0.59 0.3 -0.32
149 AT1G14750 Cyclin family protein SOLO DANCERS 0.59 0.35 -0.3
150 AT5G56450 Mitochondrial substrate carrier family protein PM-ANT 0.59 0.3 -0.29
Metabolite information
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  CID Metabolite name Pathway Information Correlation link
Compound name Stereochemistry Aracyc name pcc 2.5% 97.5% PPI
151 C0195 Phenylpyruvic acid - Phenylpyruvate phenylalanine degradation III -0.68 0.43 -0.45 C0195
152 C0012 n-Eicosanoic acid - Arachidate fatty acid activation,
fatty acid ω-oxidation,
sporopollenin precursor biosynthesis,
acyl-ACP thioesterase pathway,
ceramide degradation,
fatty acid α-oxidation,
fatty acid ω-oxidation,
phospholipases,
triacylglycerol degradation 		0.64 0.41 -0.45 C0012