AGICode | AT4G07480 |
Description | transposable element gene |
Gene Code | Description / Information | Gene name | Correlation | link | ||||
---|---|---|---|---|---|---|---|---|
pcc | 2.5% | 97.5% | PPI | |||||
1 | AT4G07480 | transposable element gene | 1 | 0.31 | -0.29 | |||
2 | AT4G11180 | Disease resistance-responsive (dirigent-like protein) family protein |
0.65 | 0.3 | -0.3 | |||
3 | AT2G48060 | unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: shoot, sperm cell; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF3595 (InterPro:IPR021999); Has 533 Blast hits to 341 proteins in 95 species: Archae - 2; Bacteria - 15; Metazoa - 318; Fungi - 0; Plants - 93; Viruses - 0; Other Eukaryotes - 105 (source: NCBI BLink). |
-0.63 | 0.31 | -0.34 | |||
4 | AT5G52340 | exocyst subunit exo70 family protein A2 | exocyst subunit exo70 family protein A2, exocyst subunit exo70 family protein A2 |
0.62 | 0.29 | -0.33 | ||
5 | AT2G17710 | unknown protein; Has 39 Blast hits to 39 proteins in 14 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 39; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). |
0.61 | 0.34 | -0.33 | |||
6 | AT2G23240 | Plant EC metallothionein-like protein, family 15 | Arabidopsis thaliana metallothionein 4b |
-0.61 | 0.34 | -0.3 | ||
7 | AT1G30300 | Metallo-hydrolase/oxidoreductase superfamily protein | -0.6 | 0.3 | -0.33 | |||
8 | AT3G10810 | zinc finger (C3HC4-type RING finger) family protein | -0.6 | 0.3 | -0.31 | |||
9 | AT4G37445 | BEST Arabidopsis thaliana protein match is: Calcium-binding EF hand family protein (TAIR:AT1G64850.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). |
0.6 | 0.3 | -0.3 | |||
10 | AT3G29220 | transposable element gene | -0.59 | 0.32 | -0.3 | |||
11 | AT1G43980 | Tetratricopeptide repeat (TPR)-like superfamily protein | 0.59 | 0.31 | -0.3 | |||
12 | AT5G47250 | LRR and NB-ARC domains-containing disease resistance protein |
-0.58 | 0.32 | -0.32 | |||
13 | AT5G35660 | Glycine-rich protein family | -0.58 | 0.32 | -0.32 | |||
14 | AT1G58230 | binding | -0.58 | 0.28 | -0.32 | |||
15 | AT3G31380 | transposable element gene | -0.57 | 0.34 | -0.31 | |||
16 | AT2G30690 | Protein of unknown function, DUF593 | 0.56 | 0.35 | -0.3 | |||
17 | AT1G06710 | Tetratricopeptide repeat (TPR)-like superfamily protein | 0.56 | 0.32 | -0.32 | |||
18 | AT3G57980 | DNA-binding bromodomain-containing protein | -0.56 | 0.34 | -0.31 | |||
19 | AT1G33540 | serine carboxypeptidase-like 18 | serine carboxypeptidase-like 18 | 0.56 | 0.31 | -0.32 | ||
20 | AT3G43950 | Protein kinase superfamily protein | 0.56 | 0.31 | -0.31 | |||
21 | AT5G22910 | cation/H+ exchanger 9 | ARABIDOPSIS THALIANA CATION/H+ EXCHANGER 9, cation/H+ exchanger 9 |
-0.55 | 0.3 | -0.3 | ||
22 | AT1G77780 | Glycosyl hydrolase superfamily protein | 0.55 | 0.32 | -0.33 | |||
23 | AT1G67670 | unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G24405.1); Has 18 Blast hits to 18 proteins in 6 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 18; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). |
0.55 | 0.34 | -0.34 | |||
24 | AT2G47300 | ribonuclease Ps | 0.55 | 0.32 | -0.3 | |||
25 | AT5G43410 | Integrase-type DNA-binding superfamily protein | -0.55 | 0.31 | -0.31 | |||
26 | AT5G39910 | Pectin lyase-like superfamily protein | -0.54 | 0.32 | -0.32 | |||
27 | AT3G23870 | Protein of unknown function (DUF803) | -0.54 | 0.32 | -0.32 | |||
28 | AT2G06190 | transposable element gene | -0.54 | 0.32 | -0.32 | |||
29 | AT2G25420 | transducin family protein / WD-40 repeat family protein | -0.54 | 0.33 | -0.32 | |||
30 | AT1G02680 | TBP-associated factor 13 | TBP-associated factor 13 | 0.53 | 0.31 | -0.32 | ||
31 | AT5G40260 | Nodulin MtN3 family protein | AtSWEET8, SWEET8 | -0.53 | 0.29 | -0.3 | ||
32 | AT2G16820 | transposable element gene | 0.53 | 0.3 | -0.3 | |||
33 | AT2G06700 | transposable element gene | -0.52 | 0.32 | -0.3 | |||
34 | AT1G28640 | GDSL-like Lipase/Acylhydrolase superfamily protein | -0.51 | 0.29 | -0.31 | |||
35 | AT5G56900 | CwfJ-like family protein / zinc finger (CCCH-type) family protein |
-0.51 | 0.3 | -0.31 | |||
36 | AT1G21850 | SKU5 similar 8 | SKU5 similar 8 | -0.5 | 0.31 | -0.31 | ||
37 | ATMG00890 | hypothetical protein | ORF106D | -0.5 | 0.33 | -0.32 | ||
38 | AT1G61290 | syntaxin of plants 124 | ATSYP124, syntaxin of plants 124 | -0.5 | 0.29 | -0.29 | ||
39 | AT4G31940 | cytochrome P450, family 82, subfamily C, polypeptide 4 | cytochrome P450, family 82, subfamily C, polypeptide 4 |
-0.5 | 0.3 | -0.31 | ||
40 | AT1G11630 | Tetratricopeptide repeat (TPR)-like superfamily protein | -0.5 | 0.32 | -0.31 |
CID | Metabolite name | Pathway Information | Correlation | link | ||||||
---|---|---|---|---|---|---|---|---|---|---|
Compound name | Stereochemistry | Aracyc name | pcc | 2.5% | 97.5% | PPI | ||||
41 | C0052 | Adenosine | - | Adenosine | adenine and adenosine salvage VI, S-adenosyl-L-methionine cycle II, cytokinins degradation, methionine degradation I (to homocysteine), adenine and adenosine salvage II |
-0.65 | 0.31 | -0.32 | ||
42 | C0088 | FAD | - | FAD | cytokinins degradation, lysine degradation II, valine degradation I, isoleucine degradation I, flavin biosynthesis I (bacteria and plants) |
-0.59 | 0.45 | -0.44 | ||
43 | C0140 | Lysine | L-Lysine | L-Lysine | lysine degradation II, tRNA charging, lysine biosynthesis VI, lysine degradation I |
-0.56 | 0.29 | -0.28 | ||
44 | C0218 | Pyridoxamine phosphate | Pyridoxamine-5'-phosphate | Pyridoxamine-5'-phosphate | pyridoxal 5'-phosphate salvage pathway | -0.54 | 0.3 | -0.3 | ||
45 | C0066 | Choline | - | Choline | choline biosynthesis III, phosphatidylcholine biosynthesis I, choline biosynthesis I, glycine betaine biosynthesis III (plants), choline biosynthesis II, sinapate ester biosynthesis, phospholipases |
-0.53 | 0.33 | -0.35 | ||
46 | C0113 | Histidinol | - | Histidinol | histidine biosynthesis | -0.5 | 0.31 | -0.3 |