AT4G05420 : damaged DNA binding protein 1A
Query Information
Cytoscape Web will replace the contents of this div with your graph.
AGICode AT4G05420
Description damaged DNA binding protein 1A
Gene information
Help   
  Gene Code Description / Information Gene name Correlation link
pcc 2.5% 97.5% PPI
1 AT4G05420 damaged DNA binding protein 1A damaged DNA binding protein 1A 1 0.3 -0.31
2 AT3G11910 ubiquitin-specific protease 13 AtUBP13, ubiquitin-specific
protease 13		 0.79 0.34 -0.33
3 AT1G32130 Transcription elongation factor (TFIIS) family protein ARABIDOPSIS THALIANA IWS1 (FROM
YEAST INTERACTS WITH SPT6), HIGH
NITROGEN INSENSITIVE 9, IWS1		 0.76 0.32 -0.31
4 AT1G71030 MYB-like 2 ARABIDOPSIS MYB-LIKE 2, MYB-like 2 0.74 0.3 -0.32
5 AT3G11090 LOB domain-containing protein 21 LOB domain-containing protein 21 -0.73 0.33 -0.33
6 AT3G42725 Putative membrane lipoprotein -0.73 0.32 -0.31
7 AT4G25940 ENTH/ANTH/VHS superfamily protein -0.72 0.32 -0.33
8 AT5G42950 GYF domain-containing protein 0.72 0.3 -0.31
9 AT1G08210 Eukaryotic aspartyl protease family protein 0.71 0.34 -0.32
10 AT3G52720 alpha carbonic anhydrase 1 alpha carbonic anhydrase 1, A.
THALIANA ALPHA CARBONIC ANHYDRASE
1, CARBONIC ANHYDRASE 1		 -0.7 0.31 -0.34
11 AT2G17730 NEP-interacting protein 2 NEP-interacting protein 2 0.7 0.3 -0.32
12 AT5G53940 Yippee family putative zinc-binding protein -0.7 0.32 -0.32
13 AT4G02350 exocyst complex component sec15B exocyst complex component sec15B 0.7 0.31 -0.32
14 AT5G56260 Ribonuclease E inhibitor RraA/Dimethylmenaquinone
methyltransferase		 -0.7 0.32 -0.32
15 AT3G05510 Phospholipid/glycerol acyltransferase family protein 0.7 0.3 -0.3
16 AT1G61260 Protein of unknown function (DUF761) -0.7 0.34 -0.31
17 AT3G62370 heme binding -0.69 0.33 -0.31
18 AT3G09850 D111/G-patch domain-containing protein 0.69 0.3 -0.32
19 AT2G19270 CONTAINS InterPro DOMAIN/s: Mitotic checkpoint protein
PRCC, C-terminal (InterPro:IPR018800); Has 930 Blast hits
to 533 proteins in 146 species: Archae - 0; Bacteria - 18;
Metazoa - 327; Fungi - 143; Plants - 61; Viruses - 0; Other
Eukaryotes - 381 (source: NCBI BLink).		 0.69 0.3 -0.32
20 AT1G77180 chromatin protein family SKIP 0.69 0.32 -0.31
21 AT1G32490 RNA helicase family protein EMBRYO DEFECTIVE 2733, ENHANCED
SILENCING PHENOTYPE 3		 0.69 0.3 -0.32
22 AT2G42380 Basic-leucine zipper (bZIP) transcription factor family
protein		 ATBZIP34, BZIP34 -0.69 0.33 -0.32
23 AT1G16260 Wall-associated kinase family protein -0.69 0.32 -0.34
24 AT5G23110 Zinc finger, C3HC4 type (RING finger) family protein 0.68 0.33 -0.34
25 AT2G27170 Structural maintenance of chromosomes (SMC) family protein STRUCTURAL MAINTENANCE OF
CHROMOSOMES 3, TITAN7		 0.68 0.32 -0.33
26 AT1G04300 TRAF-like superfamily protein 0.68 0.34 -0.3
27 AT1G63980 D111/G-patch domain-containing protein 0.68 0.32 -0.31
28 AT5G23060 calcium sensing receptor calcium sensing receptor -0.68 0.32 -0.34
29 AT1G07880 Protein kinase superfamily protein ATMPK13 -0.68 0.32 -0.31
30 AT5G07290 MEI2-like 4 MEI2-like 4, MEI2-like 4 0.68 0.3 -0.3
31 AT1G65220 ARM repeat superfamily protein 0.68 0.31 -0.33
32 AT4G17140 pleckstrin homology (PH) domain-containing protein 0.67 0.3 -0.3
33 AT1G35660 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN: plasma
membrane; EXPRESSED IN: 19 plant structures; EXPRESSED
DURING: 11 growth stages; Has 309 Blast hits to 256
proteins in 99 species: Archae - 0; Bacteria - 11; Metazoa
- 192; Fungi - 12; Plants - 36; Viruses - 0; Other
Eukaryotes - 58 (source: NCBI BLink).		 0.67 0.31 -0.33
34 AT3G01310 Phosphoglycerate mutase-like family protein 0.67 0.33 -0.32
35 AT2G21180 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT5G19875.1); Has 124 Blast hits
to 124 proteins in 12 species: Archae - 0; Bacteria - 0;
Metazoa - 0; Fungi - 0; Plants - 124; Viruses - 0; Other
Eukaryotes - 0 (source: NCBI BLink).		 0.67 0.33 -0.33
36 AT5G16520 unknown protein; Has 25 Blast hits to 25 proteins in 9
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 25; Viruses - 0; Other Eukaryotes - 0 (source:
NCBI BLink).		 0.67 0.31 -0.3
37 AT2G01120 origin recognition complex subunit 4 ORIGIN RECOGNITION COMPLEX SUBUNIT
4, origin recognition complex
subunit 4		 -0.67 0.31 -0.31
38 AT3G03380 DegP protease 7 degradation of periplasmic
proteins 7, DegP protease 7		 0.66 0.3 -0.3
39 AT3G48860 unknown protein; INVOLVED IN: biological_process unknown;
LOCATED IN: plasma membrane; EXPRESSED IN: 22 plant
structures; EXPRESSED DURING: 13 growth stages; BEST
Arabidopsis thaliana protein match is: unknown protein
(TAIR:AT5G23700.1); Has 12429 Blast hits to 9751 proteins
in 897 species: Archae - 180; Bacteria - 1190; Metazoa -
6552; Fungi - 1361; Plants - 886; Viruses - 50; Other
Eukaryotes - 2210 (source: NCBI BLink).		 0.66 0.29 -0.32
40 AT1G31580 ECS1 CXC750, ECS1 -0.66 0.31 -0.32
41 AT3G09100 mRNA capping enzyme family protein 0.66 0.31 -0.31
42 AT3G46220 unknown protein; CONTAINS InterPro DOMAIN/s: Protein of
unknown function DUF2042 (InterPro:IPR018611); Has 559
Blast hits to 533 proteins in 154 species: Archae - 3;
Bacteria - 32; Metazoa - 305; Fungi - 42; Plants - 50;
Viruses - 3; Other Eukaryotes - 124 (source: NCBI BLink).		 0.66 0.3 -0.31
43 AT1G68330 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT1G48780.1); Has 155 Blast hits
to 147 proteins in 23 species: Archae - 0; Bacteria - 0;
Metazoa - 19; Fungi - 3; Plants - 126; Viruses - 0; Other
Eukaryotes - 7 (source: NCBI BLink).		 -0.65 0.29 -0.34
44 AT5G28630 glycine-rich protein -0.65 0.32 -0.32
45 AT2G46520 cellular apoptosis susceptibility protein, putative /
importin-alpha re-exporter, putative		 0.65 0.29 -0.31
46 AT2G31955 cofactor of nitrate reductase and xanthine dehydrogenase 2 cofactor of nitrate reductase and
xanthine dehydrogenase 2		 0.65 0.31 -0.32
47 AT1G19960 BEST Arabidopsis thaliana protein match is: transmembrane
receptors (TAIR:AT2G32140.1); Has 41 Blast hits to 41
proteins in 17 species: Archae - 0; Bacteria - 2; Metazoa -
23; Fungi - 0; Plants - 11; Viruses - 0; Other Eukaryotes -
5 (source: NCBI BLink).		 -0.64 0.31 -0.3
48 AT2G44970 alpha/beta-Hydrolases superfamily protein 0.64 0.3 -0.3
49 AT3G12690 AGC kinase 1.5 AGC kinase 1.5 -0.64 0.31 -0.31
50 AT5G58380 SOS3-interacting protein 1 CBL-INTERACTING PROTEIN KINASE 10,
PKS2, SOS3-interacting protein 1,
SNF1-RELATED PROTEIN KINASE 3.8		 0.64 0.31 -0.31
51 AT3G07410 RAB GTPase homolog A5B RAB GTPase homolog A5B, RAB GTPase
homolog A5B		 -0.64 0.31 -0.32
52 AT3G46540 ENTH/VHS family protein -0.64 0.32 -0.33
53 AT5G55790 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT1G45163.1); Has 1807 Blast hits
to 1807 proteins in 277 species: Archae - 0; Bacteria - 0;
Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0;
Other Eukaryotes - 339 (source: NCBI BLink).		 -0.64 0.34 -0.31
54 AT1G06410 trehalose-phosphatase/synthase 7 trehalose-phosphatase/synthase 7,
ATTPSA, TREHALOSE -6-PHOSPHATASE
SYNTHASE S7,
trehalose-phosphatase/synthase 7		 0.64 0.33 -0.3
55 AT1G80930 MIF4G domain-containing protein / MA3 domain-containing
protein		 0.64 0.32 -0.33
56 AT5G50380 exocyst subunit exo70 family protein F1 exocyst subunit exo70 family
protein F1, exocyst subunit exo70
family protein F1		 0.63 0.31 -0.32
57 AT3G61210 S-adenosyl-L-methionine-dependent methyltransferases
superfamily protein		 -0.63 0.32 -0.32
58 AT4G20300 Protein of unknown function (DUF1639) 0.63 0.32 -0.31
59 AT1G79440 aldehyde dehydrogenase 5F1 aldehyde dehydrogenase 5F1,
ENLARGED FIL EXPRESSION DOMAIN 1,
SUCCINIC SEMIALDEHYDE
DEHYDROGENASE, SUCCINIC
SEMIALDEHYDE DEHYDROGENASE 1		 0.63 0.34 -0.32
60 AT3G42680 transposable element gene -0.63 0.34 -0.31
61 AT1G70890 MLP-like protein 43 MLP-like protein 43 -0.63 0.3 -0.29
62 AT4G32160 Phox (PX) domain-containing protein 0.63 0.31 -0.32
63 AT1G26560 beta glucosidase 40 beta glucosidase 40 -0.63 0.32 -0.33
64 AT5G06610 Protein of unknown function (DUF620) -0.62 0.34 -0.31
65 AT5G03240 polyubiquitin 3 polyubiquitin 3 0.62 0.32 -0.29
66 AT5G11390 WPP domain-interacting protein 1 WPP domain-interacting protein 1 0.62 0.31 -0.33
67 AT1G62560 flavin-monooxygenase glucosinolate S-oxygenase 3 flavin-monooxygenase glucosinolate
S-oxygenase 3		 -0.62 0.32 -0.31
68 AT2G42100 Actin-like ATPase superfamily protein -0.62 0.3 -0.34
69 AT1G77600 ARM repeat superfamily protein 0.62 0.28 -0.3
70 AT4G32240 unknown protein; Has 30201 Blast hits to 17322 proteins in
780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338;
Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes
- 2996 (source: NCBI BLink).		 -0.62 0.31 -0.31
71 AT5G20300 Avirulence induced gene (AIG1) family protein translocon at the outer envelope
membrane of chloroplasts 90		 0.62 0.29 -0.31
72 AT5G23720 dual specificity protein phosphatase family protein PROPYZAMIDE-HYPERSENSITIVE 1 0.62 0.33 -0.31
73 AT2G29080 FTSH protease 3 FTSH protease 3 0.61 0.29 -0.31
74 AT3G63070 Tudor/PWWP/MBT domain-containing protein 0.61 0.3 -0.3
75 AT2G24390 AIG2-like (avirulence induced gene) family protein -0.61 0.3 -0.32
76 AT4G02710 Kinase interacting (KIP1-like) family protein 0.61 0.32 -0.31
77 AT3G26560 ATP-dependent RNA helicase, putative 0.61 0.32 -0.32
78 AT3G06370 sodium hydrogen exchanger 4 ATNHX4, sodium hydrogen exchanger
4		 -0.61 0.3 -0.32
79 AT1G55910 zinc transporter 11 precursor zinc transporter 11 precursor -0.61 0.3 -0.34
80 AT2G39260 binding;RNA binding 0.61 0.33 -0.34
81 AT5G07580 Integrase-type DNA-binding superfamily protein -0.61 0.32 -0.31
82 AT5G10540 Zincin-like metalloproteases family protein 0.6 0.32 -0.31
83 AT4G01390 TRAF-like family protein -0.6 0.3 -0.29
84 AT1G02100 Leucine carboxyl methyltransferase SUPPRESSOR OF BRI1 0.6 0.3 -0.32
85 AT1G17610 Disease resistance protein (TIR-NBS class) -0.6 0.32 -0.31
86 AT1G24340 FAD/NAD(P)-binding oxidoreductase family protein EMBRYO DEFECTIVE 2421, EMBRYO
DEFECTIVE 260		 0.6 0.3 -0.32
87 AT5G59830 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT5G13660.2); Has 174 Blast hits
to 139 proteins in 16 species: Archae - 0; Bacteria - 0;
Metazoa - 0; Fungi - 0; Plants - 172; Viruses - 0; Other
Eukaryotes - 2 (source: NCBI BLink).		 0.6 0.31 -0.31
88 AT2G15920 transposable element gene -0.6 0.3 -0.33
89 AT5G64270 splicing factor, putative 0.6 0.33 -0.3
90 AT5G42940 RING/U-box superfamily protein 0.6 0.34 -0.31
91 AT5G36930 Disease resistance protein (TIR-NBS-LRR class) family -0.6 0.34 -0.31
92 AT3G56400 WRKY DNA-binding protein 70 ARABIDOPSIS THALIANA WRKY
DNA-BINDING PROTEIN 70, WRKY
DNA-binding protein 70		 -0.59 0.31 -0.32
93 AT4G26070 MAP kinase/ ERK kinase 1 ATMEK1, MAP kinase/ ERK kinase 1,
MITOGEN ACTIVATED PROTEIN KINASE
KINASE 1, NMAPKK		 -0.59 0.33 -0.32
Metabolite information
Help   
  CID Metabolite name Pathway Information Correlation link
Compound name Stereochemistry Aracyc name pcc 2.5% 97.5% PPI
94 C0074 Cystine L-Cystine L-Cystine protein precursor 0.72 0.46 -0.45 C0074
95 C0183 MST_3033.1 - - - -0.66 0.45 -0.48