AT4G05500 : -
Query Information
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AGICode AT4G05500
Description pseudogene, F-box protein family, AtFBL9/AtFBL23, contains similarity to N7 protein GI:3273101 from (Medicago truncatula); blastp match of 39% identity and 1.6e-34 P-value to GP|3273101|emb|CAA76808.1||Y17613 N7 protein {Medicago truncatula}
Gene information
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  Gene Code Description / Information Gene name Correlation link
pcc 2.5% 97.5% PPI
1 AT4G05500 pseudogene, F-box protein family, AtFBL9/AtFBL23, contains
similarity to N7 protein GI:3273101 from (Medicago
truncatula); blastp match of 39% identity and 1.6e-34
P-value to GP|3273101|emb|CAA76808.1||Y17613 N7 protein
{Medicago truncatula}		 1 0.31 -0.34
2 AT3G42850 Mevalonate/galactokinase family protein 0.8 0.3 -0.3
3 AT2G07070 transposable element gene 0.79 0.3 -0.33
4 AT4G30300 non-intrinsic ABC protein 15 ATP-binding cassette E3,
ARABIDOPSIS THALIANA NON-INTRINSIC
ABC PROTEIN 15, non-intrinsic ABC
protein 15		 0.79 0.31 -0.31
5 AT2G31100 alpha/beta-Hydrolases superfamily protein 0.78 0.32 -0.3
6 AT3G46860 Serine protease inhibitor, potato inhibitor I-type family
protein		 0.78 0.29 -0.34
7 AT1G46336 unknown protein; Has 1 Blast hits to 1 proteins in 1
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 1; Viruses - 0; Other Eukaryotes - 0 (source: NCBI
BLink).		 0.76 0.32 -0.3
8 AT5G61940 Ubiquitin carboxyl-terminal hydrolase-related protein 0.75 0.32 -0.32
9 AT2G37670 Transducin/WD40 repeat-like superfamily protein 0.75 0.3 -0.29
10 AT1G48095 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT1G36960.1); Has 82 Blast hits
to 82 proteins in 3 species: Archae - 0; Bacteria - 0;
Metazoa - 0; Fungi - 0; Plants - 82; Viruses - 0; Other
Eukaryotes - 0 (source: NCBI BLink).		 0.75 0.32 -0.32
11 AT5G39620 RAB GTPase homolog G1 RAB GTPase homolog G1, RAB GTPase
homolog G1		 0.74 0.31 -0.32
12 AT3G21800 UDP-glucosyl transferase 71B8 UDP-glucosyl transferase 71B8 0.74 0.33 -0.31
13 AT3G66656 AGAMOUS-like 91 AGAMOUS-like 91 -0.74 0.31 -0.31
14 AT4G11530 cysteine-rich RLK (RECEPTOR-like protein kinase) 34 cysteine-rich RLK (RECEPTOR-like
protein kinase) 34		 0.74 0.32 -0.32
15 AT2G18340 late embryogenesis abundant domain-containing protein / LEA
domain-containing protein		 -0.73 0.31 -0.32
16 AT5G13150 exocyst subunit exo70 family protein C1 exocyst subunit exo70 family
protein C1, exocyst subunit exo70
family protein C1		 0.73 0.3 -0.3
17 AT1G43140 Cullin family protein 0.73 0.31 -0.32
18 AT3G13820 F-box and associated interaction domains-containing protein 0.73 0.32 -0.32
19 AT4G29580 Cytidine/deoxycytidylate deaminase family protein 0.73 0.3 -0.31
20 AT1G30710 FAD-binding Berberine family protein -0.73 0.33 -0.33
21 AT5G30380 transposable element gene 0.72 0.32 -0.32
22 AT5G52850 Pentatricopeptide repeat (PPR) superfamily protein 0.72 0.31 -0.3
23 AT1G67710 response regulator 11 response regulator 11 0.72 0.32 -0.32
24 AT2G36760 UDP-glucosyl transferase 73C2 UDP-glucosyl transferase 73C2 0.72 0.32 -0.29
25 AT1G31260 zinc transporter 10 precursor zinc transporter 10 precursor -0.71 0.32 -0.3
26 AT2G20160 E3 ubiquitin ligase SCF complex subunit SKP1/ASK1 family
protein		 ARABIDOPSIS SKP1-LIKE 17, MEIDOS 0.71 0.31 -0.35
27 AT5G30470 transposable element gene 0.71 0.32 -0.33
28 AT1G56690 Pentatricopeptide repeat (PPR) superfamily protein 0.71 0.31 -0.31
29 AT3G16890 pentatricopeptide (PPR) domain protein 40 pentatricopeptide (PPR) domain
protein 40		 0.71 0.31 -0.33
30 AT3G06250 FAR1-related sequence 7 FAR1-related sequence 7 0.71 0.31 -0.33
31 AT1G50340 Plant invertase/pectin methylesterase inhibitor superfamily
protein		 0.71 0.33 -0.33
32 AT1G33410 SUPPRESSOR OF AUXIN RESISTANCE1 ARABIDOPSIS NUCLEOPORIN 160,
NUCLEOPORIN 160, SUPPRESSOR OF
AUXIN RESISTANCE1		 0.7 0.33 -0.31
33 AT2G11650 transposable element gene 0.7 0.31 -0.32
34 AT3G60590 unknown protein; LOCATED IN: chloroplast, chloroplast inner
membrane, chloroplast envelope; EXPRESSED IN: 23 plant
structures; EXPRESSED DURING: 14 growth stages; BEST
Arabidopsis thaliana protein match is: unknown protein
(TAIR:AT1G48460.1); Has 81 Blast hits to 81 proteins in 19
species: Archae - 0; Bacteria - 10; Metazoa - 0; Fungi - 0;
Plants - 70; Viruses - 0; Other Eukaryotes - 1 (source:
NCBI BLink).		 -0.7 0.34 -0.34
35 AT4G35170 Late embryogenesis abundant (LEA) hydroxyproline-rich
glycoprotein family		 -0.7 0.31 -0.3
36 AT4G36370 unknown protein; Has 3 Blast hits to 3 proteins in 1
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 3; Viruses - 0; Other Eukaryotes - 0 (source: NCBI
BLink).		 0.7 0.32 -0.31
37 ATMG00820 Reverse transcriptase (RNA-dependent DNA polymerase) ORF170 0.7 0.32 -0.31
38 AT1G18220 purine permease 9 purine permease 9, purine permease
9		 0.7 0.31 -0.31
39 AT1G51880 root hair specific 6 root hair specific 6 -0.7 0.33 -0.3
40 AT5G65520 Tetratricopeptide repeat (TPR)-like superfamily protein -0.7 0.31 -0.33
41 AT3G30660 transposable element gene 0.7 0.31 -0.32
42 AT4G20200 Terpenoid cyclases/Protein prenyltransferases superfamily
protein		 0.69 0.33 -0.31
43 AT1G56145 Leucine-rich repeat transmembrane protein kinase 0.69 0.31 -0.3
44 AT3G42430 transposable element gene -0.69 0.34 -0.31
45 AT1G35380 transposable element gene -0.69 0.31 -0.33
46 AT1G78470 BEST Arabidopsis thaliana protein match is: F-box family
protein (TAIR:AT1G67390.1); Has 40 Blast hits to 40
proteins in 4 species: Archae - 0; Bacteria - 0; Metazoa -
0; Fungi - 0; Plants - 40; Viruses - 0; Other Eukaryotes -
0 (source: NCBI BLink).		 0.69 0.31 -0.31
47 AT1G54955 transposable element gene -0.69 0.29 -0.31
48 AT3G42600 transposable element gene 0.69 0.32 -0.32
49 AT3G57680 Peptidase S41 family protein -0.69 0.3 -0.31
50 AT2G24070 Family of unknown function (DUF566) QWRF domain containing 4 0.69 0.3 -0.32
51 AT1G57780 heavy-metal-associated domain-containing protein -0.69 0.31 -0.32
52 AT3G04810 NIMA-related kinase 2 NIMA-related kinase 2,
NIMA-related kinase 2		 0.69 0.32 -0.31
53 AT4G05060 PapD-like superfamily protein -0.69 0.33 -0.31
54 AT1G02540 unknown protein; Has 3327 Blast hits to 2216 proteins in
265 species: Archae - 18; Bacteria - 202; Metazoa - 802;
Fungi - 283; Plants - 84; Viruses - 187; Other Eukaryotes -
1751 (source: NCBI BLink).		 0.69 0.31 -0.31
55 AT3G01380 transferases;sulfuric ester
hydrolases;catalytics;transferases		 0.69 0.33 -0.31
56 AT4G18530 Protein of unknown function (DUF707) -0.69 0.33 -0.31
57 AT1G45545 Plant protein of unknown function (DUF827) 0.69 0.31 -0.33
58 AT5G13570 decapping 2 ATDCP2, decapping 2, TRIDENT -0.68 0.31 -0.31
59 AT3G51500 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED
DURING: 13 growth stages; Has 23 Blast hits to 23 proteins
in 10 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi
- 0; Plants - 23; Viruses - 0; Other Eukaryotes - 0
(source: NCBI BLink).		 -0.68 0.31 -0.32
60 AT1G68990 male gametophyte defective 3 male gametophyte defective 3 0.68 0.34 -0.31
61 AT1G19290 Pentatricopeptide repeat (PPR) superfamily protein 0.68 0.31 -0.33
62 AT2G37510 RNA-binding (RRM/RBD/RNP motifs) family protein 0.68 0.3 -0.32
63 AT2G46300 Late embryogenesis abundant (LEA) hydroxyproline-rich
glycoprotein family		 -0.68 0.33 -0.33
64 AT1G54720 early-responsive to dehydration protein-related / ERD
protein-related		 0.68 0.31 -0.31
65 AT5G08190 nuclear factor Y, subunit B12 nuclear factor Y, subunit B12 -0.68 0.31 -0.33
66 AT4G10330 glycine-rich protein -0.68 0.31 -0.34
67 AT2G05900 SET domain protein 11 SET domain protein 11, SU(VAR)3-9
HOMOLOG 10		 0.68 0.33 -0.32
68 AT1G33870 P-loop containing nucleoside triphosphate hydrolases
superfamily protein		 0.68 0.33 -0.31
69 AT2G16200 structural molecules 0.68 0.34 -0.31
70 AT5G17140 Cysteine proteinases superfamily protein 0.68 0.33 -0.32
71 AT1G20550 O-fucosyltransferase family protein 0.68 0.28 -0.32
72 AT1G59535 unknown protein; Has 2 Blast hits to 2 proteins in 1
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 2; Viruses - 0; Other Eukaryotes - 0 (source: NCBI
BLink).		 -0.67 0.32 -0.32
73 AT1G23910 Polyketide cyclase/dehydrase and lipid transport
superfamily protein		 0.67 0.32 -0.3
74 AT4G24650 isopentenyltransferase 4 ARABIDOPSIS THALIANA
ISOPENTENYLTRANSFERASE 4,
isopentenyltransferase 4		 0.67 0.3 -0.3
75 AT4G15200 formin 3 formin 3, formin 3 0.67 0.31 -0.32
76 AT1G03100 Pentatricopeptide repeat (PPR) superfamily protein 0.67 0.3 -0.32
77 AT2G36210 SAUR-like auxin-responsive protein family 0.66 0.32 -0.31
78 AT5G17690 like heterochromatin protein (LHP1) AtLHP1, LIKE HETEROCHROMATIN
PROTEIN 1, TERMINAL FLOWER 2		 0.66 0.32 -0.33
79 AT3G12440 Polynucleotidyl transferase, ribonuclease H-like
superfamily protein		 0.66 0.31 -0.31
80 AT1G44910 pre-mRNA-processing protein 40A pre-mRNA-processing protein 40A,
pre-mRNA-processing protein 40A		 0.66 0.32 -0.31
81 AT3G42290 transposable element gene -0.66 0.31 -0.3
82 AT5G60090 Protein kinase superfamily protein 0.66 0.31 -0.33
83 AT1G76430 phosphate transporter 1;9 phosphate transporter 1;9 0.66 0.31 -0.31
84 AT1G20750 RAD3-like DNA-binding helicase protein -0.66 0.29 -0.31
85 AT5G50910 unknown protein; Has 1 Blast hits to 1 proteins in 1
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 1; Viruses - 0; Other Eukaryotes - 0 (source: NCBI
BLink).		 0.66 0.29 -0.31
86 AT3G27700 zinc finger (CCCH-type) family protein / RNA recognition
motif (RRM)-containing protein		 0.66 0.32 -0.32
87 AT5G44330 Tetratricopeptide repeat (TPR)-like superfamily protein 0.66 0.3 -0.33
88 AT5G49260 unknown protein; Has 1807 Blast hits to 1807 proteins in
277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi
- 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339
(source: NCBI BLink).		 0.66 0.33 -0.3
89 AT4G08710 transposable element gene -0.66 0.34 -0.31
90 AT3G45490 BEST Arabidopsis thaliana protein match is: RING/U-box
superfamily protein (TAIR:AT2G25370.1); Has 99 Blast hits
to 96 proteins in 10 species: Archae - 0; Bacteria - 2;
Metazoa - 0; Fungi - 0; Plants - 97; Viruses - 0; Other
Eukaryotes - 0 (source: NCBI BLink).		 -0.66 0.31 -0.31
91 AT5G27660 Trypsin family protein with PDZ domain 0.66 0.32 -0.29
92 AT4G23950 Galactose-binding protein 0.66 0.31 -0.31
93 AT4G18420 transposable element gene 0.66 0.32 -0.32
94 AT4G38390 root hair specific 17 root hair specific 17 0.66 0.31 -0.33
95 AT5G58050 SHV3-like 4 Glycerophosphodiester
phosphodiesterase (GDPD) like 6,
SHV3-like 4		 0.66 0.31 -0.31
96 AT1G18280 Bifunctional inhibitor/lipid-transfer protein/seed storage
2S albumin superfamily protein		 -0.65 0.31 -0.32
97 AT3G49400 Transducin/WD40 repeat-like superfamily protein 0.65 0.3 -0.34
98 AT4G07740 Protein of unknown function (DUF3287) -0.65 0.3 -0.31
99 AT3G10590 Duplicated homeodomain-like superfamily protein -0.65 0.32 -0.31
100 AT3G15120 P-loop containing nucleoside triphosphate hydrolases
superfamily protein		 0.65 0.31 -0.31
101 AT3G29796 unknown protein; Has 28 Blast hits to 20 proteins in 8
species: Archae - 0; Bacteria - 0; Metazoa - 18; Fungi - 0;
Plants - 1; Viruses - 0; Other Eukaryotes - 9 (source: NCBI
BLink).		 0.65 0.33 -0.31
102 AT2G03160 SKP1-like 19 SKP1-like 19, SKP1-like 19 -0.65 0.32 -0.29
103 AT1G27160 valyl-tRNA synthetase / valine--tRNA ligase-related -0.65 0.3 -0.32
104 AT4G10550 Subtilase family protein 0.65 0.32 -0.31
105 AT4G17260 Lactate/malate dehydrogenase family protein -0.65 0.32 -0.31
106 AT3G05090 Transducin/WD40 repeat-like superfamily protein LATERAL ROOT STIMULATOR 1 0.65 0.33 -0.31
107 AT2G03320 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
endomembrane system; Has 4 Blast hits to 4 proteins in 2
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 4; Viruses - 0; Other Eukaryotes - 0 (source: NCBI
BLink).		 -0.65 0.28 -0.34
108 AT2G33530 serine carboxypeptidase-like 46 serine carboxypeptidase-like 46 -0.65 0.32 -0.3
109 AT5G07680 NAC domain containing protein 80 Arabidopsis NAC domain containing
protein 79, NAC domain containing
protein 80, ATNAC4, NAC domain
containing protein 80		 0.65 0.32 -0.3
110 AT3G05260 NAD(P)-binding Rossmann-fold superfamily protein -0.65 0.31 -0.3
111 AT2G23940 Protein of unknown function (DUF788) -0.64 0.3 -0.31
112 AT4G00355 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT2G45980.1); Has 100 Blast hits
to 97 proteins in 16 species: Archae - 0; Bacteria - 0;
Metazoa - 0; Fungi - 0; Plants - 100; Viruses - 0; Other
Eukaryotes - 0 (source: NCBI BLink).		 ATG8-interacting protein 2 -0.64 0.29 -0.32
113 AT5G01070 RING/FYVE/PHD zinc finger superfamily protein -0.64 0.3 -0.31
114 AT4G03480 Ankyrin repeat family protein -0.64 0.29 -0.32
115 AT1G63030 Integrase-type DNA-binding superfamily protein DWARF AND DELAYED FLOWERING 2 -0.64 0.29 -0.33
116 AT1G61750 Receptor-like protein kinase-related family protein -0.64 0.32 -0.31
117 AT4G08970 transposable element gene -0.64 0.3 -0.33
118 AT3G51690 PIF1 helicase -0.64 0.3 -0.3
119 AT5G28070 unknown protein; Has 1807 Blast hits to 1807 proteins in
277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi
- 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339
(source: NCBI BLink).		 -0.64 0.31 -0.31
120 AT2G30400 ovate family protein 2 ARABIDOPSIS THALIANA OVATE FAMILY
PROTEIN 2, ovate family protein 2		 -0.63 0.33 -0.34
121 AT3G13720 PRA1 (Prenylated rab acceptor) family protein PRENYLATED RAB ACCEPTOR 1.F3, PRA8 -0.63 0.3 -0.32
122 AT1G54110 Membrane fusion protein Use1 -0.63 0.29 -0.32
123 AT5G06020 Plant self-incompatibility protein S1 family -0.63 0.29 -0.32
124 AT5G58850 myb domain protein 119 MYB DOMAIN PROTEIN 119, myb domain
protein 119		 -0.62 0.32 -0.32
125 AT1G61410 DNA double-strand break repair and VJ recombination XRCC4 -0.62 0.34 -0.33
126 AT5G47260 ATP binding;GTP binding;nucleotide
binding;nucleoside-triphosphatases		 -0.62 0.31 -0.31
127 AT3G13662 Disease resistance-responsive (dirigent-like protein)
family protein		 -0.62 0.31 -0.34
128 AT1G01550 Protein of unknown function (DUF793) BYPASS 1 -0.62 0.32 -0.31
129 AT3G28840 Protein of unknown function (DUF1216) -0.62 0.32 -0.32
130 AT3G04900 Heavy metal transport/detoxification superfamily protein -0.62 0.3 -0.29
131 AT4G07920 transposable element gene -0.62 0.32 -0.32
132 AT2G34440 AGAMOUS-like 29 AGAMOUS-like 29 -0.62 0.32 -0.32
133 AT4G00420 Double-stranded RNA-binding domain (DsRBD)-containing
protein		 -0.62 0.3 -0.32
134 AT3G26125 cytochrome P450, family 86, subfamily C, polypeptide 2 cytochrome P450, family 86,
subfamily C, polypeptide 2		 -0.62 0.33 -0.31
135 AT1G33900 P-loop containing nucleoside triphosphate hydrolases
superfamily protein		 -0.62 0.3 -0.32
136 AT4G30540 Class I glutamine amidotransferase-like superfamily protein -0.61 0.29 -0.33
137 AT2G21780 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT4G39360.1); Has 13 Blast hits
to 13 proteins in 2 species: Archae - 0; Bacteria - 0;
Metazoa - 0; Fungi - 0; Plants - 13; Viruses - 0; Other
Eukaryotes - 0 (source: NCBI BLink).		 -0.61 0.34 -0.32
138 AT5G38170 Bifunctional inhibitor/lipid-transfer protein/seed storage
2S albumin superfamily protein		 -0.61 0.28 -0.32
139 AT4G00940 Dof-type zinc finger DNA-binding family protein -0.61 0.29 -0.33
140 AT1G07680 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
endomembrane system; BEST Arabidopsis thaliana protein
match is: unknown protein (TAIR:AT5G23903.1); Has 7 Blast
hits to 7 proteins in 2 species: Archae - 0; Bacteria - 0;
Metazoa - 0; Fungi - 0; Plants - 7; Viruses - 0; Other
Eukaryotes - 0 (source: NCBI BLink).		 -0.61 0.3 -0.31
141 AT2G33240 myosin XI D MYOSIN XI D, myosin XI D -0.6 0.32 -0.31
142 AT4G18920 Protein of unknown function (DUF1264) -0.6 0.32 -0.32
143 AT4G08030 transposable element gene -0.6 0.33 -0.29
144 AT5G36090 transposable element gene -0.6 0.29 -0.3
145 ATMG01410 open reading frame 204 open reading frame 204 -0.6 0.31 -0.3
146 AT1G18130 Class II aaRS and biotin synthetases superfamily protein -0.6 0.31 -0.29
147 AT1G23640 unknown protein; LOCATED IN: chloroplast; EXPRESSED IN:
petal, leaf whorl, sepal, flower; EXPRESSED DURING: 4
anthesis, petal differentiation and expansion stage;
CONTAINS InterPro DOMAIN/s: Protein of unknown function
DUF220 (InterPro:IPR003863); BEST Arabidopsis thaliana
protein match is: Domain of unknown function DUF220
(TAIR:AT1G23660.1); Has 270 Blast hits to 130 proteins in
12 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi -
0; Plants - 270; Viruses - 0; Other Eukaryotes - 0 (source:
NCBI BLink).		 -0.6 0.32 -0.32