AT4G05610 : -
Query Information
Cytoscape Web will replace the contents of this div with your graph.
AGICode AT4G05610
Description transposable element gene
Gene information
Help   
  Gene Code Description / Information Gene name Correlation link
pcc 2.5% 97.5% PPI
1 AT4G05610 transposable element gene 1 0.32 -0.3
2 AT1G78890 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT1G16840.1); Has 30201 Blast
hits to 17322 proteins in 780 species: Archae - 12;
Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants -
5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI
BLink).		 -0.79 0.32 -0.29
3 AT4G17940 Tetratricopeptide repeat (TPR)-like superfamily protein -0.71 0.29 -0.33
4 AT1G16840 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT1G78890.1); Has 71 Blast hits
to 71 proteins in 12 species: Archae - 0; Bacteria - 0;
Metazoa - 0; Fungi - 0; Plants - 71; Viruses - 0; Other
Eukaryotes - 0 (source: NCBI BLink).		 -0.71 0.32 -0.29
5 AT2G46260 BTB/POZ/Kelch-associated protein -0.71 0.34 -0.31
6 AT4G27470 RING membrane-anchor 3 ATRMA3, RING membrane-anchor 3 -0.7 0.32 -0.32
7 AT2G04820 transposable element gene 0.7 0.33 -0.32
8 AT1G76660 FUNCTIONS IN: molecular_function unknown; INVOLVED IN:
biological_process unknown; LOCATED IN: plasma membrane;
EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13
growth stages; BEST Arabidopsis thaliana protein match is:
hydroxyproline-rich glycoprotein family protein
(TAIR:AT5G52430.1); Has 353 Blast hits to 231 proteins in
60 species: Archae - 0; Bacteria - 6; Metazoa - 57; Fungi -
22; Plants - 125; Viruses - 4; Other Eukaryotes - 139
(source: NCBI BLink).		 -0.69 0.34 -0.31
9 AT3G20770 Ethylene insensitive 3 family protein AtEIN3, ETHYLENE-INSENSITIVE3 -0.69 0.32 -0.31
10 AT5G44080 Basic-leucine zipper (bZIP) transcription factor family
protein		 -0.69 0.31 -0.33
11 AT3G02340 RING/U-box superfamily protein -0.68 0.31 -0.32
12 AT2G15960 unknown protein; Has 14 Blast hits to 14 proteins in 5
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 14; Viruses - 0; Other Eukaryotes - 0 (source:
NCBI BLink).		 -0.68 0.32 -0.32
13 AT3G53940 Mitochondrial substrate carrier family protein 0.68 0.3 -0.34
14 AT1G18070 Translation elongation factor EF1A/initiation factor
IF2gamma family protein		 0.68 0.31 -0.3
15 AT2G26430 arginine-rich cyclin 1 ARGININE-RICH CYCLIN 1,
arginine-rich cyclin 1		 -0.67 0.3 -0.31
16 AT1G56090 Tetratricopeptide repeat (TPR)-like superfamily protein -0.67 0.35 -0.28
17 AT1G54210 Ubiquitin-like superfamily protein AUTOPHAGY 12, ATATG12, AUTOPHAGY
12 A		 -0.67 0.3 -0.31
18 AT5G61500 autophagy 3 (APG3) ATATG3, ATG3 -0.67 0.31 -0.3
19 AT3G47160 RING/U-box superfamily protein -0.66 0.33 -0.36
20 AT5G06000 eukaryotic translation initiation factor 3G2 ARABIDOPSIS THALIANA EUKARYOTIC
TRANSLATION INITIATION FACTOR 3G2,
eukaryotic translation initiation
factor 3G2		 0.66 0.3 -0.31
21 AT1G03960 Calcium-binding EF hand family protein 0.65 0.3 -0.31
22 AT1G29970 60S ribosomal protein L18A-1 60S ribosomal protein L18A-1 -0.65 0.3 -0.29
23 AT4G21070 breast cancer susceptibility1 ARABIDOPSIS THALIANA BREAST CANCER
SUSCEPTIBILITY1, breast cancer
susceptibility1		 0.65 0.32 -0.31
24 AT1G78080 related to AP2 4 related to AP2 4, wound induced
dedifferentiation 1		 -0.65 0.31 -0.3
25 AT4G37180 Homeodomain-like superfamily protein -0.64 0.31 -0.32
26 AT3G45770 Polyketide synthase, enoylreductase family protein -0.64 0.31 -0.3
27 AT1G52820 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase
superfamily protein		 0.64 0.31 -0.32
28 AT2G15890 maternal effect embryo arrest 14 maternal effect embryo arrest 14 -0.64 0.3 -0.29
29 AT3G54380 SAC3/GANP/Nin1/mts3/eIF-3 p25 family AtSAC3C, yeast Sac3 homolog C -0.64 0.33 -0.3
30 AT3G52690 RNI-like superfamily protein 0.64 0.31 -0.31
31 AT3G12120 fatty acid desaturase 2 fatty acid desaturase 2 -0.64 0.32 -0.29
32 AT3G26740 CCR-like CCR-like -0.64 0.33 -0.31
33 AT5G41180 leucine-rich repeat transmembrane protein kinase family
protein		 0.63 0.3 -0.31
34 AT1G71696 carboxypeptidase D, putative SUPPRESSOR OF LLP1 1 0.63 0.31 -0.33
35 AT5G24520 Transducin/WD40 repeat-like superfamily protein TRANSPARENT TESTA GLABRA 1, TTG,
TRANSPARENT TESTA GLABRA 1,
UNARMED 23		 -0.63 0.32 -0.31
36 AT1G36980 unknown protein; CONTAINS InterPro DOMAIN/s:
Uncharacterised protein family UPF0220
(InterPro:IPR007919); Has 424 Blast hits to 424 proteins in
159 species: Archae - 0; Bacteria - 0; Metazoa - 228; Fungi
- 120; Plants - 62; Viruses - 0; Other Eukaryotes - 14
(source: NCBI BLink).		 -0.63 0.34 -0.3
37 AT5G19860 Protein of unknown function, DUF538 -0.63 0.28 -0.31
38 AT3G60300 RWD domain-containing protein -0.63 0.31 -0.31
39 AT1G16950 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
endomembrane system; EXPRESSED IN: stamen; EXPRESSED
DURING: 4 anthesis; Has 17 Blast hits to 17 proteins in 5
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 17; Viruses - 0; Other Eukaryotes - 0 (source:
NCBI BLink).		 0.62 0.31 -0.29
40 AT5G23480 SWIB/MDM2 domain;Plus-3;GYF 0.62 0.28 -0.32
41 AT5G51720 2 iron, 2 sulfur cluster binding 0.62 0.34 -0.32
42 AT2G19350 Eukaryotic protein of unknown function (DUF872) -0.62 0.3 -0.33
43 AT4G21350 plant U-box 8 B80, plant U-box 8 -0.62 0.29 -0.33
44 AT5G14980 alpha/beta-Hydrolases superfamily protein 0.62 0.33 -0.32
45 AT2G44850 unknown protein; CONTAINS InterPro DOMAIN/s:
Uncharacterised protein family UPF0565
(InterPro:IPR018881); BEST Arabidopsis thaliana protein
match is: unknown protein (TAIR:AT2G45380.1); Has 138 Blast
hits to 138 proteins in 53 species: Archae - 0; Bacteria -
0; Metazoa - 73; Fungi - 0; Plants - 62; Viruses - 0; Other
Eukaryotes - 3 (source: NCBI BLink).		 -0.62 0.33 -0.3
46 AT5G39870 Protein of unknown function (DUF1216) 0.61 0.3 -0.29
47 AT1G06260 Cysteine proteinases superfamily protein 0.61 0.31 -0.31
48 AT4G25540 homolog of DNA mismatch repair protein MSH3 ATMSH3, homolog of DNA mismatch
repair protein MSH3		 0.61 0.32 -0.3
49 AT4G17960 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT5G46620.1); Has 46 Blast hits
to 45 proteins in 13 species: Archae - 0; Bacteria - 0;
Metazoa - 0; Fungi - 0; Plants - 46; Viruses - 0; Other
Eukaryotes - 0 (source: NCBI BLink).		 0.61 0.32 -0.34
50 AT2G46900 CONTAINS InterPro DOMAIN/s: Basic helix-loop-helix,
Nulp1-type (InterPro:IPR006994); Has 2929 Blast hits to
2464 proteins in 333 species: Archae - 2; Bacteria - 151;
Metazoa - 913; Fungi - 372; Plants - 141; Viruses - 47;
Other Eukaryotes - 1303 (source: NCBI BLink).		 -0.6 0.33 -0.33
51 AT4G35770 Rhodanese/Cell cycle control phosphatase superfamily
protein		 ARABIDOPSIS THALIANA SENESCENCE 1,
DARK INDUCIBLE 1, SENESCENCE 1,
SENESCENCE ASSOCIATED GENE 1		 -0.6 0.31 -0.32
52 AT5G10860 Cystathionine beta-synthase (CBS) family protein CBS domain containing protein 3 -0.6 0.34 -0.31
53 AT3G09030 BTB/POZ domain-containing protein -0.6 0.32 -0.32
54 AT2G19340 Oligosaccharyltransferase complex/magnesium transporter
family protein		 -0.6 0.3 -0.33
55 AT3G61350 SKP1 interacting partner 4 SKP1 interacting partner 4 -0.6 0.32 -0.29
56 AT5G39710 Tetratricopeptide repeat (TPR)-like superfamily protein EMBRYO DEFECTIVE 2745 0.6 0.3 -0.31
57 AT2G13730 transposable element gene 0.6 0.33 -0.32
58 AT1G66780 MATE efflux family protein 0.59 0.31 -0.34
59 AT4G26830 O-Glycosyl hydrolases family 17 protein 0.59 0.32 -0.3
60 AT3G59630 diphthamide synthesis DPH2 family protein 0.59 0.31 -0.29
61 AT1G64410 transposable element gene 0.58 0.31 -0.33
62 AT2G21950 SKP1 interacting partner 6 SKP1 interacting partner 6 -0.58 0.31 -0.31
63 AT2G27470 nuclear factor Y, subunit B11 nuclear factor Y, subunit B11 0.58 0.34 -0.31
64 AT1G28330 dormancy-associated protein-like 1 DORMANCY-ASSOCIATED PROTEIN 1,
dormancy-associated protein-like 1		 -0.58 0.3 -0.31
65 AT4G32080 unknown protein; Has 7 Blast hits to 7 proteins in 1
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 7; Viruses - 0; Other Eukaryotes - 0 (source: NCBI
BLink).		 -0.58 0.3 -0.3
66 AT4G28000 P-loop containing nucleoside triphosphate hydrolases
superfamily protein		 0.58 0.31 -0.31
67 AT1G65360 AGAMOUS-like 23 AGAMOUS-like 23 0.58 0.32 -0.35
68 AT2G11220 transposable element gene -0.58 0.31 -0.31
69 AT1G12775 Pentatricopeptide repeat (PPR) superfamily protein 0.57 0.32 -0.31
70 AT5G35600 histone deacetylase7 histone deacetylase7 0.57 0.3 -0.3
71 AT2G18420 Gibberellin-regulated family protein 0.57 0.32 -0.32
72 AT2G15830 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
endomembrane system; EXPRESSED IN: 16 plant structures;
EXPRESSED DURING: 10 growth stages; BEST Arabidopsis
thaliana protein match is: unknown protein
(TAIR:AT4G33960.1); Has 18 Blast hits to 18 proteins in 4
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 18; Viruses - 0; Other Eukaryotes - 0 (source:
NCBI BLink).		 -0.57 0.34 -0.32
73 AT2G29400 type one protein phosphatase 1 PROTEIN PHOSPHATASE 1, type one
protein phosphatase 1		 -0.57 0.32 -0.3
74 AT5G63190 MA3 domain-containing protein -0.57 0.32 -0.33