AT4G05640 : -
Query Information
Cytoscape Web will replace the contents of this div with your graph.
AGICode AT4G05640
Description transposable element gene
Gene information
Help   
  Gene Code Description / Information Gene name Correlation link
pcc 2.5% 97.5% PPI
1 AT4G05640 transposable element gene 1 0.32 -0.3
2 AT5G60740 ABC transporter family protein ATP-binding cassette G28 0.72 0.33 -0.32
3 AT5G37620 Cysteine/Histidine-rich C1 domain family protein -0.71 0.31 -0.32
4 AT4G00190 pectin methylesterase 38 A. THALIANA PECTIN METHYLESTERASE
38, pectin methylesterase 38		 0.67 0.32 -0.32
5 AT1G56610 Protein with RNI-like/FBD-like domains 0.65 0.32 -0.32
6 AT4G21500 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
endomembrane system; BEST Arabidopsis thaliana protein
match is: unknown protein (TAIR:AT4G05018.1); Has 20 Blast
hits to 20 proteins in 8 species: Archae - 0; Bacteria - 0;
Metazoa - 0; Fungi - 0; Plants - 17; Viruses - 0; Other
Eukaryotes - 3 (source: NCBI BLink).		 0.65 0.33 -0.33
7 AT4G04440 transposable element gene 0.64 0.3 -0.32
8 AT1G49250 ATP-dependent DNA ligase -0.63 0.31 -0.32
9 AT2G10400 transposable element gene 0.63 0.31 -0.32
10 AT3G42100 transposable element gene -0.62 0.31 -0.31
11 AT4G02660 Beige/BEACH domain ;WD domain, G-beta repeat protein -0.62 0.32 -0.32
12 AT2G26940 C2H2-type zinc finger family protein 0.62 0.33 -0.3
13 AT2G02380 glutathione S-transferase (class zeta) 2 glutathione S-transferase (class
zeta) 2, glutathione S-transferase
(class zeta) 2		 -0.62 0.31 -0.32
14 AT1G50750 Plant mobile domain protein family 0.62 0.33 -0.3
15 AT3G62230 F-box family protein DUO1-activated F-box 1 0.61 0.3 -0.34
16 AT1G31450 Eukaryotic aspartyl protease family protein -0.61 0.31 -0.33
17 AT4G23320 cysteine-rich RLK (RECEPTOR-like protein kinase) 24 cysteine-rich RLK (RECEPTOR-like
protein kinase) 24		 0.61 0.32 -0.31
18 AT5G35150 transposable element gene -0.61 0.32 -0.31
19 AT5G65500 U-box domain-containing protein kinase family protein 0.6 0.3 -0.31
20 AT2G21000 transposable element gene 0.6 0.32 -0.31
21 AT1G32040 transposable element gene 0.59 0.33 -0.32
22 AT3G42070 transposable element gene -0.59 0.31 -0.33
23 AT1G77340 Pentatricopeptide repeat (PPR) superfamily protein 0.59 0.32 -0.31
24 AT3G04420 NAC domain containing protein 48 NAC domain containing protein 48,
NAC domain containing protein 48		 -0.59 0.3 -0.3
25 AT1G23600 Domain of unknown function DUF220 0.58 0.32 -0.32
26 AT3G26330 cytochrome P450, family 71, subfamily B, polypeptide 37 cytochrome P450, family 71,
subfamily B, polypeptide 37		 -0.58 0.32 -0.3
27 AT3G22700 F-box and associated interaction domains-containing protein 0.58 0.3 -0.34
28 AT1G36150 Bifunctional inhibitor/lipid-transfer protein/seed storage
2S albumin superfamily protein		 -0.58 0.32 -0.33
29 AT1G26900 Pentatricopeptide repeat (PPR) superfamily protein -0.57 0.31 -0.33
30 AT2G30430 unknown protein; Has 3 Blast hits to 3 proteins in 1
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 3; Viruses - 0; Other Eukaryotes - 0 (source: NCBI
BLink).		 0.57 0.3 -0.28
31 AT4G29200 Beta-galactosidase related protein 0.57 0.33 -0.31
32 AT3G28560 BCS1 AAA-type ATPase 0.57 0.33 -0.32
33 AT1G51300 alpha/beta-Hydrolases superfamily protein -0.57 0.34 -0.31
34 AT5G05310 TLC ATP/ADP transporter -0.57 0.32 -0.3
35 AT4G03930 Plant invertase/pectin methylesterase inhibitor superfamily 0.57 0.34 -0.28
36 AT2G35150 EXORDIUM like 1 EXORDIUM LIKE 7 -0.57 0.29 -0.32
37 AT5G07530 glycine rich protein 17 ARABIDOPSIS THALIANA GLYCINE RICH
PROTEIN 7, ARABIDOPSIS THALIANA
GLYCINE RICH PROTEIN 17, glycine
rich protein 17		 -0.57 0.33 -0.31
38 AT5G19640 Major facilitator superfamily protein 0.56 0.3 -0.31
39 AT1G67990 S-adenosyl-L-methionine-dependent methyltransferases
superfamily protein		 TAPETUM-SPECIFIC METHYLTRANSFERASE
1, TSM1		 0.56 0.31 -0.33
40 AT1G64280 regulatory protein (NPR1) ARABIDOPSIS NONEXPRESSER OF PR
GENES 1, NON-INDUCIBLE IMMUNITY 1,
NONEXPRESSER OF PR GENES 1,
SALICYLIC ACID INSENSITIVE 1		 0.56 0.32 -0.33
41 AT5G12260 BEST Arabidopsis thaliana protein match is:
glycosyltransferase family protein 2 (TAIR:AT5G60700.1);
Has 1807 Blast hits to 1807 proteins in 277 species: Archae
- 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants -
385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI
BLink).		 0.56 0.31 -0.33
42 AT4G14820 Pentatricopeptide repeat (PPR) superfamily protein -0.56 0.32 -0.32
43 AT1G17950 myb domain protein 52 MYB DOMAIN PROTEIN 52, BW52, myb
domain protein 52		 -0.56 0.33 -0.31
44 AT3G53620 pyrophosphorylase 4 pyrophosphorylase 4,
pyrophosphorylase 4		 0.56 0.33 -0.3
45 AT1G61920 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
endomembrane system; EXPRESSED IN: sperm cell, male
gametophyte, pollen tube; EXPRESSED DURING: M germinated
pollen stage; Has 3 Blast hits to 3 proteins in 1 species:
Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants -
3; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).		 -0.56 0.31 -0.31
46 AT3G46760 Protein kinase superfamily protein 0.56 0.3 -0.31
47 AT1G58210 kinase interacting family protein EMBRYO DEFECTIVE 1674 -0.56 0.34 -0.32
48 AT5G54700 Ankyrin repeat family protein 0.55 0.31 -0.31
49 AT4G20470 unknown protein; Has 1807 Blast hits to 1807 proteins in
277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi
- 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339
(source: NCBI BLink).		 -0.55 0.33 -0.32
50 AT4G30660 Low temperature and salt responsive protein family 0.55 0.31 -0.3
51 AT5G28170 transposable element gene -0.55 0.32 -0.32
52 AT5G49370 Pleckstrin homology (PH) domain superfamily protein -0.55 0.32 -0.32
53 AT2G22060 BEST Arabidopsis thaliana protein match is: Galactose
oxidase/kelch repeat superfamily protein
(TAIR:AT2G22030.1); Has 148 Blast hits to 148 proteins in 2
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 148; Viruses - 0; Other Eukaryotes - 0 (source:
NCBI BLink).		 0.54 0.3 -0.31
54 AT4G07920 transposable element gene 0.54 0.32 -0.33
55 AT4G11030 AMP-dependent synthetase and ligase family protein 0.54 0.33 -0.32
56 AT4G07780 transposable element gene 0.54 0.35 -0.32
57 AT2G12610 transposable element gene 0.53 0.32 -0.32
58 AT4G07840 transposable element gene -0.53 0.33 -0.32
59 AT3G29732 transposable element gene 0.53 0.32 -0.31
60 AT5G42700 AP2/B3-like transcriptional factor family protein -0.52 0.33 -0.32
61 AT4G09090 Carbohydrate-binding X8 domain superfamily protein -0.52 0.32 -0.31
62 AT3G27290 RNI-like superfamily protein 0.52 0.3 -0.33
63 AT1G47730 F-box and associated interaction domains-containing protein 0.52 0.32 -0.31
64 AT4G04530 transposable element gene 0.52 0.31 -0.32
65 AT3G49450 F-box and associated interaction domains-containing protein 0.51 0.34 -0.32
66 AT5G36080 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT3G32904.1); Has 1807 Blast hits
to 1807 proteins in 277 species: Archae - 0; Bacteria - 0;
Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0;
Other Eukaryotes - 339 (source: NCBI BLink).		 -0.51 0.33 -0.33
67 AT3G53770 late embryogenesis abundant 3 (LEA3) family protein 0.51 0.3 -0.33
68 AT2G02720 Pectate lyase family protein 0.51 0.34 -0.31
69 AT1G36000 LOB domain-containing protein 5 LOB domain-containing protein 5 0.51 0.3 -0.31
70 AT2G18610 unknown protein; Has 1 Blast hits to 1 proteins in 1
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 1; Viruses - 0; Other Eukaryotes - 0 (source: NCBI
BLink).		 0.51 0.29 -0.35
71 AT3G24060 Plant self-incompatibility protein S1 family -0.51 0.32 -0.34
72 AT1G75800 Pathogenesis-related thaumatin superfamily protein 0.51 0.31 -0.32
73 AT4G02910 unknown protein; Has 5 Blast hits to 5 proteins in 2
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 5; Viruses - 0; Other Eukaryotes - 0 (source: NCBI
BLink).		 0.51 0.31 -0.31
74 AT5G35470 unknown protein; Has 1807 Blast hits to 1807 proteins in
277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi
- 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339
(source: NCBI BLink).		 -0.5 0.31 -0.32
75 AT5G35380 Protein kinase protein with adenine nucleotide alpha
hydrolases-like domain		 -0.5 0.3 -0.31
76 AT1G68420 Class II aaRS and biotin synthetases superfamily protein -0.5 0.32 -0.3
77 AT3G15870 Fatty acid desaturase family protein -0.49 0.33 -0.3
Metabolite information
Help   
  CID Metabolite name Pathway Information Correlation link
Compound name Stereochemistry Aracyc name pcc 2.5% 97.5% PPI
78 C0035 4-Methoxyindol-3-ylmethylglucosinolate - 4-Methoxy-3-indolylmethyl glucosinolate glucosinolate biosynthesis from tryptophan,
indole glucosinolate breakdown (active in intact plant cell) 		0.66 0.44 -0.46 C0035
79 C0197 Phosphatidylcholine-36:1 - Phosphatidylcholine-36:1 choline biosynthesis III,
diacylglycerol biosynthesis,
phospholipases,
triacylglycerol biosynthesis,
linoleate biosynthesis I,
phosphatidylcholine biosynthesis III,
glutathione redox reactions I 		0.57 0.5 -0.51 C0197