AT4G04620 : autophagy 8b
Query Information
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AGICode AT4G04620
Description Ubiquitin-like superfamily protein
Gene information
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  Gene Code Description / Information Gene name Correlation link
pcc 2.5% 97.5% PPI
1 AT4G04620 Ubiquitin-like superfamily protein autophagy 8b 1 0.32 -0.32
2 AT5G13330 related to AP2 6l related to AP2 6l 0.84 0.3 -0.32
3 AT3G06140 RING/U-box superfamily protein -0.83 0.32 -0.32
4 AT1G02470 Polyketide cyclase/dehydrase and lipid transport
superfamily protein		 0.81 0.3 -0.3
5 AT4G24780 Pectin lyase-like superfamily protein -0.8 0.32 -0.31
6 AT4G22560 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT4G12450.1); Has 380 Blast hits
to 380 proteins in 21 species: Archae - 0; Bacteria - 0;
Metazoa - 0; Fungi - 6; Plants - 374; Viruses - 0; Other
Eukaryotes - 0 (source: NCBI BLink).		 -0.8 0.32 -0.31
7 AT5G18310 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN: plasma
membrane; EXPRESSED IN: 22 plant structures; EXPRESSED
DURING: 13 growth stages; BEST Arabidopsis thaliana protein
match is: unknown protein (TAIR:AT5G48500.1); Has 30201
Blast hits to 17322 proteins in 780 species: Archae - 12;
Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants -
5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI
BLink).		 0.8 0.32 -0.31
8 AT2G43080 P4H isoform 1 P4H isoform 1 0.79 0.31 -0.34
9 AT1G09140 SERINE-ARGININE PROTEIN 30 Serine/Arginine-Rich Protein
Splicing Factor 30,
SERINE-ARGININE PROTEIN 30,
ATSRP30.1, ATSRP30.2,
Serine/Arginine-Rich Protein
Splicing Factor 30		 0.79 0.31 -0.29
10 AT3G56170 Ca-2+ dependent nuclease Ca-2+ dependent nuclease 0.78 0.32 -0.29
11 AT4G32830 ataurora1 ataurora1, ataurora1 -0.78 0.32 -0.33
12 AT5G12010 unknown protein; INVOLVED IN: response to salt stress;
LOCATED IN: chloroplast, plasma membrane, membrane;
EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13
growth stages; BEST Arabidopsis thaliana protein match is:
unknown protein (TAIR:AT4G29780.1); Has 1807 Blast hits to
1807 proteins in 277 species: Archae - 0; Bacteria - 0;
Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0;
Other Eukaryotes - 339 (source: NCBI BLink).		 0.78 0.35 -0.32
13 AT3G57830 Leucine-rich repeat protein kinase family protein -0.78 0.32 -0.31
14 AT4G30270 xyloglucan endotransglucosylase/hydrolase 24 MERISTEM 5, meristem-5, SENESCENCE
4, xyloglucan
endotransglucosylase/hydrolase 24		 0.77 0.3 -0.31
15 AT3G04070 NAC domain containing protein 47 NAC domain containing protein 47,
NAC domain containing protein 47		 0.77 0.32 -0.3
16 AT4G31670 ubiquitin-specific protease 18 ubiquitin-specific protease 18 0.77 0.33 -0.32
17 AT4G15830 ARM repeat superfamily protein -0.77 0.32 -0.3
18 AT1G75500 Walls Are Thin 1 Walls Are Thin 1 -0.77 0.32 -0.3
19 AT5G56580 MAP kinase kinase 6 ARABIDOPSIS NQK1, ARABIDOPSIS
THALIANA MAP KINASE KINASE 6, MAP
kinase kinase 6		 -0.77 0.32 -0.31
20 AT5G17760 P-loop containing nucleoside triphosphate hydrolases
superfamily protein		 0.77 0.3 -0.31
21 AT1G20930 cyclin-dependent kinase B2;2 cyclin-dependent kinase B2;2 -0.77 0.31 -0.32
22 AT5G43450 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase
superfamily protein		 0.77 0.31 -0.3
23 AT1G64390 glycosyl hydrolase 9C2 glycosyl hydrolase 9C2, glycosyl
hydrolase 9C2		 -0.77 0.32 -0.32
24 AT5G02370 ATP binding microtubule motor family protein -0.76 0.31 -0.3
25 AT3G26290 cytochrome P450, family 71, subfamily B, polypeptide 26 cytochrome P450, family 71,
subfamily B, polypeptide 26		 0.76 0.29 -0.32
26 AT2G31750 UDP-glucosyl transferase 74D1 UDP-glucosyl transferase 74D1 0.76 0.31 -0.32
27 AT1G02730 cellulose synthase-like D5 cellulose synthase-like D5,
CELLULOSE SYNTHASE LIKE D5,
cellulose synthase-like D5, SALT
OVERLY SENSITIVE 6		 -0.76 0.32 -0.31
28 AT3G04630 WVD2-like 1 WVD2-like 1 -0.76 0.31 -0.31
29 AT5G03460 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
endomembrane system; EXPRESSED IN: 24 plant structures;
EXPRESSED DURING: 15 growth stages; Has 30201 Blast hits to
17322 proteins in 780 species: Archae - 12; Bacteria -
1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses
- 0; Other Eukaryotes - 2996 (source: NCBI BLink).		 0.76 0.33 -0.3
30 AT3G26090 G-protein coupled receptors;GTPase activators REGULATOR OF G-PROTEIN SIGNALING
1, REGULATOR OF G-PROTEIN
SIGNALING 1		 0.76 0.33 -0.3
31 AT5G15510 TPX2 (targeting protein for Xklp2) protein family -0.76 0.32 -0.31
32 AT5G48460 Actin binding Calponin homology (CH) domain-containing
protein		 -0.75 0.34 -0.34
33 AT5G65720 nitrogen fixation S (NIFS)-like 1 ARABIDOPSIS THALIANA NITROGEN
FIXATION S (NIFS)-LIKE 1, NITROGEN
FIXATION S HOMOLOG 1, nitrogen
fixation S (NIFS)-like 1, NITROGEN
FIXATION S HOMOLOG 1		 0.75 0.34 -0.31
34 AT4G21980 Ubiquitin-like superfamily protein AUTOPHAGY 8A, AUTOPHAGY-RELATED 8A 0.75 0.31 -0.33
35 AT1G01225 NC domain-containing protein-related -0.75 0.29 -0.3
36 AT4G01730 DHHC-type zinc finger family protein -0.75 0.33 -0.3
37 AT5G14680 Adenine nucleotide alpha hydrolases-like superfamily
protein		 0.75 0.33 -0.3
38 AT5G61450 P-loop containing nucleoside triphosphate hydrolases
superfamily protein		 0.75 0.34 -0.29
39 AT5G22390 Protein of unknown function (DUF3049) -0.75 0.33 -0.34
40 AT1G20630 catalase 1 catalase 1 0.75 0.31 -0.33
41 AT5G62710 Leucine-rich repeat protein kinase family protein -0.75 0.31 -0.31
42 AT2G34190 Xanthine/uracil permease family protein -0.75 0.3 -0.33
43 AT3G04010 O-Glycosyl hydrolases family 17 protein 0.75 0.31 -0.32
44 AT4G24690 ubiquitin-associated (UBA)/TS-N domain-containing protein /
octicosapeptide/Phox/Bemp1 (PB1) domain-containing protein		 Arabidopsis thaliana next to BRCA1
gene 1, next to BRCA1 gene 1		 0.75 0.31 -0.35
45 AT3G19820 cell elongation protein / DWARF1 / DIMINUTO (DIM) CABBAGE 1, DIMINUTIA, DIMINUTO 1,
DWARF 1, ENHANCED VERY-LOW-FLUENCE
RESPONSES 1		 -0.75 0.34 -0.32
46 AT2G46390 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
endomembrane system; EXPRESSED IN: 24 plant structures;
EXPRESSED DURING: 15 growth stages; Has 4 Blast hits to 4
proteins in 2 species: Archae - 0; Bacteria - 0; Metazoa -
0; Fungi - 0; Plants - 4; Viruses - 0; Other Eukaryotes - 0
(source: NCBI BLink).		 succinate dehydrogenase 8 0.75 0.34 -0.31
47 AT1G05680 Uridine diphosphate glycosyltransferase 74E2 Uridine diphosphate
glycosyltransferase 74E2		 0.75 0.31 -0.31
48 AT5G64380 Inositol monophosphatase family protein -0.75 0.33 -0.29
49 AT1G10410 Protein of unknown function (DUF1336) 0.75 0.33 -0.31
50 AT1G05470 DNAse I-like superfamily protein COTYLEDON VASCULAR PATTERN 2 -0.75 0.32 -0.29
51 AT3G55660 ROP (rho of plants) guanine nucleotide exchange factor 6 ATROPGEF6, ROP (rho of plants)
guanine nucleotide exchange factor
6		 -0.74 0.31 -0.31
52 AT2G25880 ataurora2 ataurora2, ataurora2 -0.74 0.31 -0.33
53 AT1G33170 S-adenosyl-L-methionine-dependent methyltransferases
superfamily protein		 -0.74 0.31 -0.3
54 AT1G33440 Major facilitator superfamily protein -0.74 0.32 -0.31
55 AT3G08590 Phosphoglycerate mutase,
2,3-bisphosphoglycerate-independent		 2,3-biphosphoglycerate-independent
phosphoglycerate mutase 2		 0.74 0.32 -0.31
56 AT1G23190 Phosphoglucomutase/phosphomannomutase family protein phosphoglucomutase 3 0.74 0.33 -0.3
57 AT1G34370 C2H2 and C2HC zinc fingers superfamily protein sensitive to proton rhizotoxicity
1		 0.74 0.3 -0.31
58 AT4G13250 NAD(P)-binding Rossmann-fold superfamily protein NON-YELLOW COLORING 1 0.74 0.3 -0.32
59 AT2G16710 Iron-sulphur cluster biosynthesis family protein 0.74 0.31 -0.33
60 AT3G52110 unknown protein; Has 191 Blast hits to 174 proteins in 54
species: Archae - 0; Bacteria - 7; Metazoa - 45; Fungi - 7;
Plants - 40; Viruses - 0; Other Eukaryotes - 92 (source:
NCBI BLink).		 -0.74 0.32 -0.32
61 AT3G23890 topoisomerase II ATTOPII, topoisomerase II -0.74 0.33 -0.31
62 AT2G25060 early nodulin-like protein 14 AtENODL14, early nodulin-like
protein 14		 -0.73 0.32 -0.31
63 AT1G04990 Zinc finger C-x8-C-x5-C-x3-H type family protein 0.73 0.32 -0.33
64 AT4G31840 early nodulin-like protein 15 AtENODL15, early nodulin-like
protein 15		 -0.73 0.33 -0.32
65 AT2G30820 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT1G06660.1); Has 35333 Blast
hits to 34131 proteins in 2444 species: Archae - 798;
Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531;
Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink).		 -0.73 0.3 -0.33
66 AT3G58670 Protein of unknown function (DUF1637) 0.73 0.31 -0.3
67 AT5G16720 Protein of unknown function, DUF593 -0.73 0.32 -0.31
68 AT1G48480 receptor-like kinase 1 receptor-like kinase 1 -0.73 0.29 -0.31
69 AT5G62960 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT1G10660.1); Has 35333 Blast
hits to 34131 proteins in 2444 species: Archae - 798;
Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531;
Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink).		 -0.73 0.31 -0.31
70 AT4G13345 Serinc-domain containing serine and sphingolipid
biosynthesis protein		 maternal effect embryo arrest 55 0.73 0.31 -0.32
71 AT5G57440 Haloacid dehalogenase-like hydrolase (HAD) superfamily
protein		 GLYCEROL-3-PHOSPHATASE 2, GS1 -0.73 0.32 -0.3
72 AT1G44110 Cyclin A1;1 Cyclin A1;1 -0.73 0.3 -0.31
73 AT4G38660 Pathogenesis-related thaumatin superfamily protein -0.72 0.32 -0.31
74 AT1G27285 transposable element gene -0.72 0.31 -0.31
75 AT2G34150 SCAR family protein ATRANGAP2, ATSCAR1, SCAR1,
WISKOTT-ALDRICH SYNDROME PROTEIN
FAMILY VERPROLIN HOMOLOGOUS
PROTEIN 1		 -0.72 0.32 -0.32
76 AT3G20500 purple acid phosphatase 18 PURPLE ACID PHOSPHATASE 18, purple
acid phosphatase 18		 0.72 0.31 -0.3
77 AT3G09390 metallothionein 2A ARABIDOPSIS THALIANA
METALLOTHIONEIN-1, ARABIDOPSIS
THALIANA METALLOTHIONEIN-K,
metallothionein 2A		 0.72 0.3 -0.3
78 AT5G47480 RGPR-related 0.72 0.3 -0.29
79 AT2G39220 PATATIN-like protein 6 PLA IIB, PATATIN-like protein 6 -0.72 0.3 -0.3
80 AT5G45040 Cytochrome c cytochrome c6A -0.72 0.32 -0.3
81 AT3G51720 Plant protein of unknown function (DUF827) -0.72 0.31 -0.32
82 AT1G08560 syntaxin of plants 111 ATSYP111, KNOLLE, syntaxin of
plants 111		 -0.71 0.31 -0.29
83 AT1G77810 Galactosyltransferase family protein 0.71 0.31 -0.32
84 AT2G30600 BTB/POZ domain-containing protein 0.71 0.34 -0.29
85 AT3G55420 unknown protein; Has 21 Blast hits to 21 proteins in 8
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 21; Viruses - 0; Other Eukaryotes - 0 (source:
NCBI BLink).		 -0.71 0.3 -0.33
86 AT5G59540 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase
superfamily protein		 0.71 0.31 -0.31
87 AT5G04540 Myotubularin-like phosphatases II superfamily 0.71 0.31 -0.32
88 AT3G46490 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase
superfamily protein		 -0.71 0.32 -0.29
89 AT3G06030 NPK1-related protein kinase 3 NPK1-related protein kinase 3,
AtANP3, MAPKKK12, NPK1-related
protein kinase 3		 -0.7 0.32 -0.33
90 AT1G03820 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
endomembrane system; EXPRESSED IN: 21 plant structures;
EXPRESSED DURING: 13 growth stages; Has 1345 Blast hits to
1122 proteins in 102 species: Archae - 2; Bacteria - 28;
Metazoa - 28; Fungi - 30; Plants - 109; Viruses - 0; Other
Eukaryotes - 1148 (source: NCBI BLink).		 -0.7 0.31 -0.32
91 AT1G53290 Galactosyltransferase family protein -0.7 0.3 -0.3
92 AT5G20030 Plant Tudor-like RNA-binding protein -0.7 0.32 -0.3
93 AT4G26660 INVOLVED IN: biological_process unknown; LOCATED IN:
chloroplast; EXPRESSED IN: 13 plant structures; EXPRESSED
DURING: 7 growth stages; CONTAINS InterPro DOMAIN/s:
Kinesin-related protein (InterPro:IPR010544); BEST
Arabidopsis thaliana protein match is: unknown protein
(TAIR:AT5G55520.2); Has 1807 Blast hits to 1807 proteins in
277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi
- 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339
(source: NCBI BLink).		 -0.7 0.3 -0.31
94 AT2G28760 UDP-XYL synthase 6 UDP-XYL synthase 6 -0.7 0.32 -0.31
95 AT2G44190 Family of unknown function (DUF566) ENDOSPERM DEFECTIVE 1, EMBRYO
DEFECTIVE 3116, QWRF domain
containing 5		 -0.7 0.34 -0.31
96 AT1G31320 LOB domain-containing protein 4 LOB domain-containing protein 4 -0.7 0.31 -0.32
97 AT3G29030 expansin A5 ARABIDOPSIS THALIANA EXPANSIN 5,
ARABIDOPSIS THALIANA EXPANSIN A5,
ATHEXP ALPHA 1.4, EXPANSIN 5,
expansin A5		 -0.7 0.32 -0.31
98 AT1G79500 Aldolase-type TIM barrel family protein AtkdsA1 -0.7 0.31 -0.31
99 AT5G51600 Microtubule associated protein (MAP65/ASE1) family protein ARABIDOPSIS THALIANA
MICROTUBULE-ASSOCIATED PROTEIN
65-3, MICROTUBULE-ASSOCIATED
PROTEIN 65-3, PLEIADE		 -0.7 0.31 -0.31
100 AT5G25090 early nodulin-like protein 13 AtENODL13, early nodulin-like
protein 13		 -0.69 0.3 -0.32
101 AT3G25980 DNA-binding HORMA family protein MITOTIC ARREST-DEFICIENT 2 -0.69 0.33 -0.31
102 AT4G12440 adenine phosphoribosyl transferase 4 adenine phosphoribosyl transferase
4		 -0.69 0.3 -0.31
103 AT3G03680 C2 calcium/lipid-binding plant phosphoribosyltransferase
family protein		 -0.69 0.32 -0.32
104 AT1G09450 Protein kinase superfamily protein AtHaspin, Haspin-related gene -0.69 0.31 -0.32
105 AT5G16870 Peptidyl-tRNA hydrolase II (PTH2) family protein -0.69 0.31 -0.3
106 AT2G32010 CVP2 like 1 CVP2 like 1 -0.69 0.33 -0.34
107 AT5G40610 NAD-dependent glycerol-3-phosphate dehydrogenase family
protein		 -0.69 0.32 -0.33
108 AT3G51280 Tetratricopeptide repeat (TPR)-like superfamily protein -0.69 0.31 -0.32
109 AT5G15930 plant adhesion molecule 1 plant adhesion molecule 1 -0.69 0.32 -0.32
Metabolite information
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  CID Metabolite name Pathway Information Correlation link
Compound name Stereochemistry Aracyc name pcc 2.5% 97.5% PPI
110 C0010 myo-Inositol-1-phosphate D,L-myo-Inositol-1-phosphate 1D-myo-Inositol (3)-phosphate myo-inositol biosynthesis,
1D-myo-inositol hexakisphosphate biosynthesis III (Spirodela polyrrhiza) 		-0.75 0.46 -0.47 C0010