AT4G04650 : -
Query Information
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AGICode AT4G04650
Description RNA-directed DNA polymerase (reverse transcriptase)-related family protein
Gene information
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  Gene Code Description / Information Gene name Correlation link
pcc 2.5% 97.5% PPI
1 AT4G04650 RNA-directed DNA polymerase (reverse transcriptase)-related
family protein		 1 0.33 -0.3
2 AT5G28170 transposable element gene 0.72 0.31 -0.32
3 AT2G02660 F-box associated ubiquitination effector family protein -0.7 0.33 -0.33
4 AT3G55770 GATA type zinc finger transcription factor family protein WLIM2b -0.7 0.31 -0.3
5 AT2G35460 Late embryogenesis abundant (LEA) hydroxyproline-rich
glycoprotein family		 0.69 0.31 -0.3
6 AT5G41640 Protein of unknown function (DUF626) 0.69 0.33 -0.3
7 AT1G62940 acyl-CoA synthetase 5 acyl-CoA synthetase 5 0.68 0.33 -0.31
8 AT4G33870 Peroxidase superfamily protein 0.67 0.33 -0.31
9 AT3G43630 Vacuolar iron transporter (VIT) family protein 0.67 0.34 -0.31
10 AT5G35600 histone deacetylase7 histone deacetylase7 0.66 0.31 -0.31
11 AT3G10220 tubulin folding cofactor B EMBRYO DEFECTIVE 2804 -0.66 0.3 -0.34
12 AT5G42560 Abscisic acid-responsive (TB2/DP1, HVA22) family protein -0.65 0.32 -0.33
13 AT5G50500 unknown protein; Has 1807 Blast hits to 1807 proteins in
277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi
- 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339
(source: NCBI BLink).		 0.64 0.31 -0.32
14 AT2G27380 extensin proline-rich 1 extensin proline-rich 1, extensin
proline-rich 1		 0.64 0.31 -0.32
15 AT3G24315 Sec20 family protein AtSec20 -0.64 0.3 -0.28
16 AT1G28135 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
chloroplast; Has 7 Blast hits to 7 proteins in 1 species:
Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants -
7; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).		 0.64 0.31 -0.32
17 AT2G37160 Transducin/WD40 repeat-like superfamily protein 0.63 0.33 -0.29
18 AT4G04560 transposable element gene -0.63 0.32 -0.33
19 AT3G09130 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT3G42786.1); Has 7 Blast hits to
7 proteins in 2 species: Archae - 0; Bacteria - 0; Metazoa
- 0; Fungi - 0; Plants - 7; Viruses - 0; Other Eukaryotes -
0 (source: NCBI BLink).		 0.63 0.32 -0.31
20 AT3G61740 SET domain protein 14 ATX3, SET domain protein 14 0.62 0.31 -0.33
21 AT3G24340 chromatin remodeling 40 chromatin remodeling 40 0.62 0.32 -0.32
22 AT5G54950 Aconitase family protein 0.62 0.33 -0.33
23 AT1G32000 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
chloroplast; BEST Arabidopsis thaliana protein match is:
unknown protein (TAIR:AT5G38190.1); Has 14 Blast hits to 14
proteins in 2 species: Archae - 0; Bacteria - 0; Metazoa -
0; Fungi - 0; Plants - 14; Viruses - 0; Other Eukaryotes -
0 (source: NCBI BLink).		 0.62 0.32 -0.33
24 AT2G22270 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT4G39860.2); Has 247 Blast hits
to 231 proteins in 42 species: Archae - 0; Bacteria - 17;
Metazoa - 14; Fungi - 5; Plants - 145; Viruses - 0; Other
Eukaryotes - 66 (source: NCBI BLink).		 -0.62 0.29 -0.31
25 AT5G37610 Eukaryotic porin family protein 0.62 0.29 -0.31
26 AT5G01310 APRATAXIN-like APRATAXIN-like 0.62 0.32 -0.33
27 AT3G43760 transposable element gene 0.62 0.35 -0.3
28 AT5G59800 methyl-CPG-binding domain 7 ARABIDOPSIS THALIANA
METHYL-CPG-BINDING DOMAIN 7,
methyl-CPG-binding domain 7		 0.61 0.33 -0.32
29 AT1G27600 Nucleotide-diphospho-sugar transferases superfamily protein IRREGULAR XYLEM 9 Homolog,
IRREGULAR XYLEM 9-LIKE		 -0.61 0.29 -0.33
30 AT3G56520 NAC (No Apical Meristem) domain transcriptional regulator
superfamily protein		 -0.61 0.3 -0.31
31 AT4G36105 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
nucleus; EXPRESSED IN: 6 plant structures; EXPRESSED
DURING: LP.04 four leaves visible, 4 anthesis, petal
differentiation and expansion stage; BEST Arabidopsis
thaliana protein match is: unknown protein
(TAIR:AT2G17990.1); Has 30201 Blast hits to 17322 proteins
in 780 species: Archae - 12; Bacteria - 1396; Metazoa -
17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other
Eukaryotes - 2996 (source: NCBI BLink).		 0.61 0.3 -0.29
32 AT4G37950 Rhamnogalacturonate lyase family protein 0.6 0.32 -0.3
33 AT1G79350 RING/FYVE/PHD zinc finger superfamily protein embryo defective 1135 0.6 0.33 -0.31
34 AT5G10860 Cystathionine beta-synthase (CBS) family protein CBS domain containing protein 3 -0.6 0.33 -0.29
35 AT5G08100 N-terminal nucleophile aminohydrolases (Ntn hydrolases)
superfamily protein		 asparaginase A1 -0.6 0.31 -0.32
36 AT1G05770 Mannose-binding lectin superfamily protein -0.6 0.31 -0.32
37 AT5G15070 Phosphoglycerate mutase-like family protein 0.6 0.32 -0.31
38 AT4G18890 BES1/BZR1 homolog 3 BES1/BZR1 homolog 3 0.59 0.33 -0.33
39 AT2G34980 phosphatidylinositolglycan synthase family protein SETH1 0.59 0.33 -0.31
40 AT2G06890 transposable element gene 0.59 0.31 -0.32
41 AT3G28430 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
mitochondrion; EXPRESSED IN: 17 plant structures; EXPRESSED
DURING: 6 growth stages; CONTAINS InterPro DOMAIN/s:
Protein of unknown function FPL (InterPro:IPR019155); Has
243 Blast hits to 233 proteins in 101 species: Archae - 0;
Bacteria - 0; Metazoa - 110; Fungi - 0; Plants - 53;
Viruses - 0; Other Eukaryotes - 80 (source: NCBI BLink).		 0.59 0.35 -0.31
42 AT1G49250 ATP-dependent DNA ligase 0.59 0.32 -0.33
43 AT2G27300 NTM1-like 8 Arabidopsis NAC domain containing
protein 40, NTM1-like 8		 0.59 0.3 -0.33
44 AT3G28260 unknown protein; Has 0 Blast hits to 0 proteins in 0
species (source: NCBI BLink).		 0.59 0.28 -0.31
45 AT5G12050 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT3G13980.1); Has 1807 Blast hits
to 1807 proteins in 277 species: Archae - 0; Bacteria - 0;
Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0;
Other Eukaryotes - 339 (source: NCBI BLink).		 -0.59 0.33 -0.3
46 AT5G63620 GroES-like zinc-binding alcohol dehydrogenase family
protein		 -0.59 0.31 -0.34
47 AT5G01550 lectin receptor kinase a4.1 lectin receptor kinase a4.1 0.59 0.33 -0.33
48 AT5G24390 Ypt/Rab-GAP domain of gyp1p superfamily protein -0.58 0.31 -0.3
49 AT4G17690 Peroxidase superfamily protein -0.58 0.32 -0.32
50 AT5G54700 Ankyrin repeat family protein -0.58 0.3 -0.32
51 AT2G19630 F-box and associated interaction domains-containing protein 0.58 0.3 -0.32
52 AT5G51870 AGAMOUS-like 71 AGAMOUS-like 71 0.58 0.29 -0.31
53 AT3G58740 citrate synthase 1 citrate synthase 1 0.58 0.33 -0.32
54 AT1G63280 Serine protease inhibitor (SERPIN) family protein 0.58 0.31 -0.34
55 AT3G19610 Plant protein of unknown function (DUF936) -0.58 0.29 -0.32
56 AT4G38120 ARM repeat superfamily protein 0.58 0.32 -0.29
57 AT1G18290 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: N-terminal protein myristoylation; LOCATED IN:
chloroplast; EXPRESSED IN: root; Has 94 Blast hits to 94
proteins in 12 species: Archae - 0; Bacteria - 0; Metazoa -
0; Fungi - 0; Plants - 94; Viruses - 0; Other Eukaryotes -
0 (source: NCBI BLink).		 -0.57 0.34 -0.3
58 AT2G06960 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase
superfamily protein		 -0.57 0.31 -0.33
59 AT2G20620 Protein of unknown function (DUF626) -0.57 0.31 -0.33
60 AT4G36780 BES1/BZR1 homolog 2 BES1/BZR1 homolog 2 -0.57 0.31 -0.33
61 AT1G27140 glutathione S-transferase tau 14 glutathione S-transferase tau 14,
GLUTATHIONE S-TRANSFERASE 13,
glutathione S-transferase tau 14		 -0.57 0.31 -0.33
62 AT3G17090 Protein phosphatase 2C family protein -0.57 0.33 -0.32
63 AT4G13960 F-box/RNI-like superfamily protein -0.56 0.29 -0.31
64 AT5G45240 Disease resistance protein (TIR-NBS-LRR class) -0.56 0.31 -0.3
65 AT3G28770 Protein of unknown function (DUF1216) -0.56 0.31 -0.32
66 AT1G09610 Protein of unknown function (DUF579) -0.56 0.31 -0.33
67 AT3G07930 DNA glycosylase superfamily protein -0.56 0.32 -0.34
68 AT2G15790 peptidyl-prolyl cis-trans isomerase / cyclophilin-40
(CYP40) / rotamase		 CYCLOPHILIN 40, SQUINT -0.56 0.33 -0.32
69 AT3G47630 FUNCTIONS IN: molecular_function unknown; INVOLVED IN:
biological_process unknown; LOCATED IN: endomembrane
system; EXPRESSED IN: 21 plant structures; EXPRESSED
DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s:
Mitochondrial matrix Mmp37 (InterPro:IPR015222); Has 325
Blast hits to 325 proteins in 172 species: Archae - 0;
Bacteria - 0; Metazoa - 109; Fungi - 140; Plants - 43;
Viruses - 0; Other Eukaryotes - 33 (source: NCBI BLink).		 -0.56 0.34 -0.33
70 AT4G16430 basic helix-loop-helix (bHLH) DNA-binding superfamily
protein		 -0.56 0.31 -0.32
71 AT3G59130 Cysteine/Histidine-rich C1 domain family protein -0.56 0.32 -0.33
72 AT1G12230 Aldolase superfamily protein -0.55 0.32 -0.33
73 AT2G29050 RHOMBOID-like 1 RHOMBOID-like 1, RHOMBOID-like 1 -0.55 0.31 -0.31
74 AT1G66470 ROOT HAIR DEFECTIVE6 AtRHD6, ROOT HAIR DEFECTIVE6 -0.54 0.32 -0.31
75 AT1G34270 Exostosin family protein -0.54 0.33 -0.31
76 AT5G19790 related to AP2 11 related to AP2 11 -0.54 0.3 -0.31
77 AT5G58580 TOXICOS EN LEVADURA 63 TOXICOS EN LEVADURA 63, TOXICOS EN
LEVADURA 63		 -0.54 0.3 -0.32
78 AT1G53000 Nucleotide-diphospho-sugar transferases superfamily protein AtCKS, CMP-KDO synthetase, KDSB -0.54 0.31 -0.32
79 AT5G18120 APR-like 7 APR-like 7, APR-like 7 -0.54 0.33 -0.32
80 AT5G13530 protein kinases;ubiquitin-protein ligases KEEP ON GOING -0.54 0.3 -0.31
81 AT1G48390 RNI-like superfamily protein -0.54 0.31 -0.32
82 AT5G47510 Sec14p-like phosphatidylinositol transfer family protein -0.53 0.31 -0.3
83 AT1G08990 plant glycogenin-like starch initiation protein 5 plant glycogenin-like starch
initiation protein 5		 -0.53 0.29 -0.32
84 AT5G35510 unknown protein; Has 1807 Blast hits to 1807 proteins in
277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi
- 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339
(source: NCBI BLink).		 -0.52 0.29 -0.31
85 AT4G03800 transposable element gene -0.52 0.31 -0.31
Metabolite information
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  CID Metabolite name Pathway Information Correlation link
Compound name Stereochemistry Aracyc name pcc 2.5% 97.5% PPI
86 C0145 Maltotetraose - Maltotetraose starch degradation II 0.78 0.46 -0.46 C0145
87 C0211 PR_MST_2158.8 - - - 0.6 0.45 -0.43