AT4G04170 : -
Query Information
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AGICode AT4G04170
Description transposable element gene
Gene information
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  Gene Code Description / Information Gene name Correlation link
pcc 2.5% 97.5% PPI
1 AT4G04170 transposable element gene 1 0.31 -0.31
2 AT4G28900 transposable element gene 0.69 0.3 -0.3
3 AT1G48180 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT1G51670.1); Has 39 Blast hits
to 39 proteins in 2 species: Archae - 0; Bacteria - 0;
Metazoa - 0; Fungi - 0; Plants - 39; Viruses - 0; Other
Eukaryotes - 0 (source: NCBI BLink).		 -0.68 0.34 -0.31
4 AT5G47400 unknown protein; FUNCTIONS IN: molecular_function unknown;
LOCATED IN: endomembrane system; EXPRESSED IN: 23 plant
structures; EXPRESSED DURING: 13 growth stages; Has 1807
Blast hits to 1807 proteins in 277 species: Archae - 0;
Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385;
Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).		 -0.63 0.31 -0.33
5 AT2G01840 transposable element gene -0.62 0.31 -0.31
6 AT4G32220 transposable element gene -0.62 0.3 -0.29
7 AT2G11110 transposable element gene 0.61 0.33 -0.3
8 AT3G04740 RNA polymerase II transcription mediators ARABIDOPSIS MEDIATOR COMPONENTS
14, MEDIATOR COMPONENTS 14,
STRUWWELPETER		 -0.61 0.3 -0.31
9 AT2G36980 Tetratricopeptide repeat (TPR)-like superfamily protein -0.6 0.31 -0.3
10 AT5G18350 Disease resistance protein (TIR-NBS-LRR class) family 0.59 0.29 -0.32
11 AT1G49015 DPP6 N-terminal domain-like protein -0.59 0.32 -0.31
12 AT4G39490 cytochrome P450, family 96, subfamily A, polypeptide 10 cytochrome P450, family 96,
subfamily A, polypeptide 10		 0.59 0.3 -0.34
13 AT5G43680 unknown protein; Has 30201 Blast hits to 17322 proteins in
780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338;
Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes
- 2996 (source: NCBI BLink).		 0.59 0.33 -0.29
14 AT4G04470 Peroxisomal membrane 22 kDa (Mpv17/PMP22) family protein PMP22 0.59 0.31 -0.31
15 AT1G43810 unknown protein; Has 6 Blast hits to 6 proteins in 2
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 6; Viruses - 0; Other Eukaryotes - 0 (source: NCBI
BLink).		 -0.59 0.28 -0.33
16 AT3G42310 unknown protein; Has 66 Blast hits to 66 proteins in 13
species: Archae - 0; Bacteria - 0; Metazoa - 12; Fungi - 0;
Plants - 18; Viruses - 31; Other Eukaryotes - 5 (source:
NCBI BLink).		 -0.59 0.3 -0.32
17 AT3G14340 unknown protein; Has 1 Blast hits to 1 proteins in 1
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 1; Viruses - 0; Other Eukaryotes - 0 (source: NCBI
BLink).		 -0.59 0.32 -0.29
18 AT2G25640 SPOC domain / Transcription elongation factor S-II protein -0.59 0.32 -0.29
19 AT5G51800 Protein kinase superfamily protein 0.58 0.33 -0.33
20 AT3G45480 RING/U-box protein with C6HC-type zinc finger 0.57 0.35 -0.3
21 AT3G22670 Pentatricopeptide repeat (PPR) superfamily protein -0.57 0.31 -0.33
22 AT2G07320 transposable element gene -0.57 0.33 -0.33
23 AT3G01130 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; EXPRESSED IN: male
gametophyte, pollen tube; EXPRESSED DURING: M germinated
pollen stage; BEST Arabidopsis thaliana protein match is:
unknown protein (TAIR:AT5G15320.1); Has 64 Blast hits to 64
proteins in 11 species: Archae - 0; Bacteria - 0; Metazoa -
0; Fungi - 0; Plants - 64; Viruses - 0; Other Eukaryotes -
0 (source: NCBI BLink).		 -0.57 0.31 -0.31
24 AT1G78510 solanesyl diphosphate synthase 1 solanesyl diphosphate synthase 1 0.57 0.32 -0.31
25 AT4G31740 Sec1/munc18-like (SM) proteins superfamily 0.56 0.33 -0.32
26 AT2G04300 Leucine-rich repeat protein kinase family protein -0.56 0.33 -0.31
27 AT2G34580 CONTAINS InterPro DOMAIN/s: Herpesvirus UL139,
cytomegalovirus (InterPro:IPR021042); Has 30201 Blast hits
to 17322 proteins in 780 species: Archae - 12; Bacteria -
1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses
- 0; Other Eukaryotes - 2996 (source: NCBI BLink).		 0.56 0.34 -0.3
28 AT4G10280 RmlC-like cupins superfamily protein 0.56 0.3 -0.3
29 AT1G30020 Protein of unknown function, DUF538 -0.56 0.31 -0.35
30 AT1G06270 Pentatricopeptide repeat (PPR) superfamily protein -0.56 0.32 -0.33
31 AT3G51940 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT5G03990.1); Has 215 Blast hits
to 164 proteins in 38 species: Archae - 0; Bacteria - 35;
Metazoa - 16; Fungi - 18; Plants - 121; Viruses - 0; Other
Eukaryotes - 25 (source: NCBI BLink).		 -0.56 0.29 -0.31
32 AT3G28400 transposable element gene 0.56 0.32 -0.33
33 AT4G09300 LisH and RanBPM domains containing protein 0.55 0.32 -0.33
34 AT5G22910 cation/H+ exchanger 9 ARABIDOPSIS THALIANA CATION/H+
EXCHANGER 9, cation/H+ exchanger
9		 -0.55 0.32 -0.31
35 AT1G70040 Protein of unknown function (DUF1163) -0.55 0.34 -0.31
36 AT2G31500 calcium-dependent protein kinase 24 calcium-dependent protein kinase
24		 0.55 0.32 -0.31
37 AT2G06310 transposable element gene 0.55 0.3 -0.31
38 AT3G27510 Cysteine/Histidine-rich C1 domain family protein -0.55 0.32 -0.31
39 ATMG01240 hypothetical protein ORF100C -0.55 0.3 -0.33
40 AT5G52480 RNI-like superfamily protein -0.55 0.29 -0.3
41 AT3G60780 Protein of unknown function (DUF1442) -0.55 0.33 -0.32
42 AT3G20200 Protein kinase protein with adenine nucleotide alpha
hydrolases-like domain		 0.54 0.32 -0.33
43 AT2G40230 HXXXD-type acyl-transferase family protein -0.54 0.32 -0.29
44 AT1G67670 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT1G24405.1); Has 18 Blast hits
to 18 proteins in 6 species: Archae - 0; Bacteria - 0;
Metazoa - 0; Fungi - 0; Plants - 18; Viruses - 0; Other
Eukaryotes - 0 (source: NCBI BLink).		 0.54 0.31 -0.31
45 AT1G64010 Serine protease inhibitor (SERPIN) family protein -0.54 0.29 -0.33
46 AT2G27090 Protein of unknown function (DUF630 and DUF632) -0.54 0.31 -0.3
47 AT4G34430 DNA-binding family protein SWITCH/SUCROSE NONFERMENTING 3D,
CHB3		 -0.54 0.32 -0.31
48 AT1G05670 Pentatricopeptide repeat (PPR-like) superfamily protein 0.54 0.3 -0.3
49 AT5G56070 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT5G56050.1); Has 1807 Blast hits
to 1807 proteins in 277 species: Archae - 0; Bacteria - 0;
Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0;
Other Eukaryotes - 339 (source: NCBI BLink).		 0.54 0.31 -0.31
50 AT3G30260 AGAMOUS-like 79 AGAMOUS-like 79 0.54 0.32 -0.31
51 AT4G29980 FUNCTIONS IN: molecular_function unknown; INVOLVED IN:
biological_process unknown; LOCATED IN: endomembrane
system; EXPRESSED IN: leaf whorl, sepal, flower, seed;
EXPRESSED DURING: petal differentiation and expansion
stage, E expanded cotyledon stage; BEST Arabidopsis
thaliana protein match is: Fasciclin-like arabinogalactan
family protein (TAIR:AT1G30800.1); Has 30201 Blast hits to
17322 proteins in 780 species: Archae - 12; Bacteria -
1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses
- 0; Other Eukaryotes - 2996 (source: NCBI BLink).		 -0.54 0.3 -0.33
52 AT5G06720 peroxidase 2 peroxidase 2, peroxidase 2 0.54 0.31 -0.32
53 AT3G16550 DEGP protease 12 DEGP protease 12 -0.53 0.29 -0.31
54 AT2G45040 Matrixin family protein 0.53 0.31 -0.32
55 AT2G13680 callose synthase 5 ARABIDOPSIS THALIANA GLUCAN
SYNTHASE-LIKE 2, callose synthase
5, GLUCAN SYNTHASE-LIKE 2		 0.53 0.31 -0.32
56 AT5G01280 BEST Arabidopsis thaliana protein match is: proline-rich
family protein (TAIR:AT3G09000.1); Has 1807 Blast hits to
1807 proteins in 277 species: Archae - 0; Bacteria - 0;
Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0;
Other Eukaryotes - 339 (source: NCBI BLink).		 -0.53 0.33 -0.31
57 AT2G29250 Concanavalin A-like lectin protein kinase family protein 0.53 0.3 -0.32
58 AT4G27460 Cystathionine beta-synthase (CBS) family protein -0.52 0.32 -0.34
59 AT1G60380 NAC (No Apical Meristem) domain transcriptional regulator
superfamily protein		 0.52 0.33 -0.32
60 AT3G11760 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
cellular_component unknown; EXPRESSED IN: 23 plant
structures; EXPRESSED DURING: 14 growth stages; BEST
Arabidopsis thaliana protein match is: unknown protein
(TAIR:AT5G04860.1); Has 84 Blast hits to 73 proteins in 13
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 84; Viruses - 0; Other Eukaryotes - 0 (source:
NCBI BLink).		 -0.52 0.31 -0.33
61 AT5G25990 FUNCTIONS IN: molecular_function unknown; INVOLVED IN:
biological_process unknown; LOCATED IN: chloroplast; BEST
Arabidopsis thaliana protein match is: Core-2/I-branching
beta-1,6-N-acetylglucosaminyltransferase family protein
(TAIR:AT5G25970.1); Has 1807 Blast hits to 1807 proteins in
277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi
- 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339
(source: NCBI BLink).		 -0.52 0.31 -0.31
62 AT5G27830 FUNCTIONS IN: molecular_function unknown; INVOLVED IN:
response to oxidative stress; LOCATED IN: endomembrane
system; EXPRESSED IN: 22 plant structures; EXPRESSED
DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s:
Folate receptor, conserved region (InterPro:IPR018143); Has
1807 Blast hits to 1807 proteins in 277 species: Archae -
0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385;
Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).		 0.52 0.32 -0.29
63 AT4G12270 Copper amine oxidase family protein -0.52 0.3 -0.33
64 AT5G53960 ATP binding;DNA binding;DNA topoisomerase
(ATP-hydrolyzing)s		 -0.52 0.31 -0.32
65 AT5G66670 Protein of unknown function (DUF677) 0.52 0.31 -0.3
66 AT3G29070 emp24/gp25L/p24 family/GOLD family protein -0.52 0.32 -0.33
67 AT5G38440 Plant self-incompatibility protein S1 family 0.52 0.33 -0.32
68 AT1G80740 chromomethylase 1 chromomethylase 1, DNA
METHYLTRANSFERASE 4		 0.52 0.34 -0.29
69 AT5G07380 unknown protein; Has 84 Blast hits to 81 proteins in 31
species: Archae - 0; Bacteria - 0; Metazoa - 42; Fungi - 0;
Plants - 41; Viruses - 0; Other Eukaryotes - 1 (source:
NCBI BLink).		 0.51 0.3 -0.3
70 AT1G15830 unknown protein; Has 165982 Blast hits to 57214 proteins in
2459 species: Archae - 263; Bacteria - 44622; Metazoa -
55751; Fungi - 10656; Plants - 17613; Viruses - 2527; Other
Eukaryotes - 34550 (source: NCBI BLink).		 0.51 0.33 -0.33
71 AT1G60540 pseudogene of the dynamin family Dynamin related protein 4B -0.51 0.31 -0.29
72 AT5G66710 Protein kinase superfamily protein -0.51 0.33 -0.3
73 AT5G24440 CTC-interacting domain 13 CTC-interacting domain 13 0.51 0.32 -0.32
74 AT4G26930 myb domain protein 97 myb domain protein 97, myb domain
protein 97		 0.51 0.33 -0.3
75 AT5G60110 pumilio 18 pumilio 18, pumilio 18 -0.51 0.31 -0.3
76 AT4G15755 Calcium-dependent lipid-binding (CaLB domain) family
protein		 0.5 0.32 -0.33
77 AT5G23790 galactinol synthase 5 galactinol synthase 5, galactinol
synthase 5		 -0.5 0.34 -0.33
78 AT4G22440 unknown protein; Has 11 Blast hits to 11 proteins in 4
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 11; Viruses - 0; Other Eukaryotes - 0 (source:
NCBI BLink).		 -0.5 0.33 -0.33
79 AT5G46100 Pentatricopeptide repeat (PPR) superfamily protein -0.5 0.3 -0.31
80 AT2G07280 unknown protein; Has 19 Blast hits to 19 proteins in 3
species: Archae - 0; Bacteria - 2; Metazoa - 0; Fungi - 0;
Plants - 17; Viruses - 0; Other Eukaryotes - 0 (source:
NCBI BLink).		 -0.5 0.33 -0.3
81 AT1G09700 dsRNA-binding domain-like superfamily protein DSRNA-BINDING PROTEIN 1,
HYPONASTIC LEAVES 1		 0.5 0.33 -0.33
82 AT1G55950 DNA-binding storekeeper protein-related transcriptional
regulator		 -0.5 0.31 -0.32
83 AT5G18040 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT4G29760.1); Has 1807 Blast hits
to 1807 proteins in 277 species: Archae - 0; Bacteria - 0;
Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0;
Other Eukaryotes - 339 (source: NCBI BLink).		 0.5 0.3 -0.31
84 AT4G39756 Galactose oxidase/kelch repeat superfamily protein 0.5 0.31 -0.3
85 AT3G48030 hypoxia-responsive family protein / zinc finger (C3HC4-type
RING finger) family protein		 -0.5 0.31 -0.33
86 AT1G05800 alpha/beta-Hydrolases superfamily protein DONGLE -0.5 0.32 -0.32
87 AT2G02640 Cysteine/Histidine-rich C1 domain family protein 0.5 0.32 -0.31
88 AT1G14420 Pectate lyase family protein AT59 0.5 0.29 -0.31
89 AT3G16930 unknown protein; Has 21 Blast hits to 21 proteins in 5
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 21; Viruses - 0; Other Eukaryotes - 0 (source:
NCBI BLink).		 -0.49 0.28 -0.34
90 AT1G72410 COP1-interacting protein-related -0.49 0.31 -0.31
91 AT4G32300 S-domain-2 5 S-domain-2 5 -0.49 0.29 -0.3
92 AT5G17470 EF hand calcium-binding protein family -0.49 0.31 -0.3
93 AT1G27080 nitrate transporter 1.6 nitrate transporter 1.6 -0.48 0.32 -0.32
94 AT4G18180 Pectin lyase-like superfamily protein -0.48 0.33 -0.33
95 AT4G04280 transposable element gene -0.48 0.31 -0.31