AGICode | AT4G04300 |
Description | transposable element gene |
Gene Code | Description / Information | Gene name | Correlation | link | ||||
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pcc | 2.5% | 97.5% | PPI | |||||
1 | AT4G04300 | transposable element gene | 1 | 0.31 | -0.3 |
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2 | AT3G25210 | Tetratricopeptide repeat (TPR)-like superfamily protein | 0.75 | 0.29 | -0.32 |
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3 | AT3G09320 | DHHC-type zinc finger family protein | 0.72 | 0.29 | -0.32 |
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4 | AT1G34590 | transposable element gene | -0.7 | 0.29 | -0.31 |
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5 | AT3G51550 | Malectin/receptor-like protein kinase family protein | FERONIA | 0.69 | 0.3 | -0.31 |
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6 | AT3G49510 | F-box family protein | 0.69 | 0.32 | -0.32 |
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7 | AT2G15700 | transposable element gene | -0.68 | 0.32 | -0.3 |
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8 | AT2G13335 | transposable element gene | 0.67 | 0.31 | -0.3 |
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9 | AT2G19400 | AGC (cAMP-dependent, cGMP-dependent and protein kinase C) kinase family protein |
-0.67 | 0.31 | -0.3 |
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10 | AT1G76920 | F-box family protein | 0.67 | 0.31 | -0.31 |
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11 | AT5G61650 | CYCLIN P4;2 | CYCP4, CYCLIN P4;2 | 0.67 | 0.32 | -0.3 |
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12 | AT2G40210 | AGAMOUS-like 48 | AGAMOUS-like 48 | -0.67 | 0.33 | -0.3 |
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13 | AT2G37320 | Tetratricopeptide repeat (TPR)-like superfamily protein | 0.66 | 0.3 | -0.32 |
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14 | AT4G31280 | unknown protein; Has 2 Blast hits to 2 proteins in 1 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 2; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). |
-0.66 | 0.32 | -0.31 |
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15 | AT4G02170 | unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G38700.1); Has 53 Blast hits to 53 proteins in 10 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 53; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). |
0.66 | 0.32 | -0.32 |
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16 | AT1G38340 | transposable element gene | -0.66 | 0.3 | -0.3 |
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17 | AT1G52820 | 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein |
-0.66 | 0.32 | -0.33 |
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18 | AT5G46440 | FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; BEST Arabidopsis thaliana protein match is: Pentatricopeptide repeat (PPR) superfamily protein (TAIR:AT5G46460.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). |
-0.66 | 0.33 | -0.31 |
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19 | AT4G21130 | Transducin/WD40 repeat-like superfamily protein | EMBRYO DEFECTIVE 2271 | 0.66 | 0.31 | -0.31 |
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20 | AT4G20490 | transposable element gene | -0.66 | 0.31 | -0.31 |
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21 | AT1G75250 | RAD-like 6 | RAD-like 6, RAD-like 6, RADIALIS-LIKE SANT/MYB 3 |
0.66 | 0.31 | -0.31 |
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22 | AT1G01310 | CAP (Cysteine-rich secretory proteins, Antigen 5, and Pathogenesis-related 1 protein) superfamily protein |
-0.66 | 0.33 | -0.31 |
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23 | AT1G35995 | transposable element gene | 0.65 | 0.33 | -0.31 |
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24 | AT5G02410 | DIE2/ALG10 family | homolog of yeast ALG10 | -0.65 | 0.32 | -0.34 |
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25 | AT2G39240 | RNA polymerase I specific transcription initiation factor RRN3 protein |
0.65 | 0.3 | -0.3 |
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26 | AT4G20200 | Terpenoid cyclases/Protein prenyltransferases superfamily protein |
-0.65 | 0.32 | -0.33 |
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27 | AT1G26270 | Phosphatidylinositol 3- and 4-kinase family protein | 0.65 | 0.29 | -0.32 |
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28 | AT1G54390 | PHD finger protein-related | INHIBITOR OF GROWTH 2 | -0.65 | 0.32 | -0.33 |
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29 | AT3G43680 | transposable element gene | 0.65 | 0.33 | -0.32 |
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30 | AT3G24330 | O-Glycosyl hydrolases family 17 protein | -0.64 | 0.29 | -0.3 |
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31 | AT4G28720 | Flavin-binding monooxygenase family protein | YUCCA 8 | 0.64 | 0.32 | -0.3 |
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32 | AT3G20990 | transposable element gene | 0.64 | 0.32 | -0.31 |
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33 | AT4G07460 | transposable element gene | 0.64 | 0.3 | -0.3 |
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34 | AT1G31040 | PLATZ transcription factor family protein | 0.64 | 0.28 | -0.32 |
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35 | AT5G37640 | ubiquitin 9 | ubiquitin 9 | 0.63 | 0.32 | -0.34 |
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36 | AT3G27550 | RNA-binding CRS1 / YhbY (CRM) domain protein | 0.63 | 0.33 | -0.3 |
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37 | AT3G15390 | silencing defective 5 | silencing defective 5 | -0.63 | 0.33 | -0.29 |
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38 | AT3G23750 | Leucine-rich repeat protein kinase family protein | 0.63 | 0.33 | -0.32 |
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39 | AT2G15880 | Leucine-rich repeat (LRR) family protein | 0.63 | 0.32 | -0.29 |
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40 | AT2G14630 | transposable element gene | -0.63 | 0.3 | -0.32 |
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41 | AT3G30843 | transposable element gene | 0.63 | 0.33 | -0.3 |
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42 | AT1G61430 | S-locus lectin protein kinase family protein | 0.63 | 0.3 | -0.31 |
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43 | AT5G61920 | unknown protein; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 6 plant structures; EXPRESSED DURING: 4 anthesis, F mature embryo stage, petal differentiation and expansion stage, E expanded cotyledon stage, D bilateral stage; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G67170.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). |
0.63 | 0.33 | -0.31 |
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44 | AT4G27550 | trehalose-6-phosphatase synthase S4 | ARABIDOPSIS THALIANA TREHALOSE PHOSPHATASE/SYNTHASE 4, trehalose-6-phosphatase synthase S4 |
-0.63 | 0.31 | -0.33 |
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45 | AT2G19250 | pseudogene, similar to Magnesium-chelatase subunit chlD, chloroplast precursor (Mg- protoporphyrin IX chelatase) (Mg-chelatase subunit D). (Common tobacco), similar to SP|O24133 Magnesium-chelatase subunit chlD, chloroplast precursor (Mg-protoporphyrin IX chelatase) (Mg-chelatase subunit D) {Nicotiana tabacum}; blastp match of 78% identity and 5.0e-07 P-value to SP|O24133|CHLD_TOBAC Magnesium-chelatase subunit chlD, chloroplast precursor (Mg- protoporphyrin IX chelatase) (Mg-chelatase subunit D). (Common tobacco) {Nicotiana tabacum} |
-0.63 | 0.29 | -0.31 |
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46 | AT2G37140 | Terpenoid synthases superfamily protein | 0.63 | 0.3 | -0.32 |
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47 | AT4G39400 | Leucine-rich receptor-like protein kinase family protein | ATBRI1, BR INSENSITIVE 1, BRASSINOSTEROID INSENSITIVE 1, CABBAGE 2, DWARF 2 |
0.62 | 0.32 | -0.34 |
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48 | AT2G13150 | Basic-leucine zipper (bZIP) transcription factor family protein |
0.62 | 0.3 | -0.31 |
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49 | AT5G49410 | unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G73940.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). |
0.62 | 0.33 | -0.31 |
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50 | AT2G40440 | BTB/POZ domain-containing protein | -0.62 | 0.3 | -0.32 |
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51 | AT1G34480 | Cysteine/Histidine-rich C1 domain family protein | -0.62 | 0.31 | -0.34 |
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52 | AT5G49380 | CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF625 (InterPro:IPR006887); BEST Arabidopsis thaliana protein match is: binding (TAIR:AT3G06670.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). |
-0.62 | 0.3 | -0.32 |
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53 | AT2G15325 | Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein |
0.62 | 0.31 | -0.32 |
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54 | AT2G22320 | unknown protein; Has 7 Blast hits to 7 proteins in 4 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 7; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). |
0.62 | 0.33 | -0.3 |
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55 | AT2G39120 | Ubiquitin carboxyl-terminal hydrolase family protein | what's this factor 9 | 0.62 | 0.31 | -0.34 |
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56 | AT1G19530 | unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: N-terminal protein myristoylation, anaerobic respiration; LOCATED IN: cellular_component unknown; EXPRESSED IN: leaf apex, inflorescence meristem, hypocotyl, root, flower; EXPRESSED DURING: petal differentiation and expansion stage; Has 47 Blast hits to 47 proteins in 13 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 47; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). |
0.62 | 0.32 | -0.31 |
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57 | AT2G20210 | RNI-like superfamily protein | 0.61 | 0.31 | -0.29 |
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58 | AT2G07680 | multidrug resistance-associated protein 11 | ATP-binding cassette C13, multidrug resistance-associated protein 11, multidrug resistance-associated protein 11 |
-0.61 | 0.3 | -0.3 |
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59 | AT4G35820 | 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein |
-0.61 | 0.32 | -0.31 |
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60 | AT3G58060 | Cation efflux family protein | 0.61 | 0.3 | -0.3 |
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61 | AT3G44270 | transposable element gene | 0.61 | 0.33 | -0.32 |
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62 | AT4G25360 | TRICHOME BIREFRINGENCE-LIKE 18 | TRICHOME BIREFRINGENCE-LIKE 18 | 0.61 | 0.32 | -0.33 |
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63 | AT2G17960 | unknown protein; Has 1 Blast hits to 1 proteins in 1 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 1; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). |
-0.61 | 0.32 | -0.32 |
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64 | AT5G39560 | Galactose oxidase/kelch repeat superfamily protein | -0.61 | 0.3 | -0.31 |
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65 | AT1G46696 | Protein of unknown function, DUF601 | 0.61 | 0.31 | -0.33 |
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66 | AT1G51990 | O-methyltransferase family protein | -0.61 | 0.31 | -0.31 |
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67 | AT2G10920 | unknown protein; Has 5 Blast hits to 5 proteins in 1 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 5; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). |
-0.61 | 0.32 | -0.33 |
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68 | AT4G17245 | RING/U-box superfamily protein | 0.6 | 0.31 | -0.3 |
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69 | AT2G32360 | Ubiquitin-like superfamily protein | -0.6 | 0.31 | -0.32 |
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70 | AT4G05300 | transposable element gene | 0.6 | 0.3 | -0.31 |
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71 | AT3G48480 | Cysteine proteinases superfamily protein | -0.6 | 0.33 | -0.32 |
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72 | AT3G57050 | cystathionine beta-lyase | cystathionine beta-lyase | -0.6 | 0.33 | -0.32 |
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73 | AT3G03360 | F-box/RNI-like superfamily protein | -0.6 | 0.29 | -0.31 |
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74 | AT1G43840 | transposable element gene | 0.6 | 0.32 | -0.32 |
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75 | AT2G26410 | IQ-domain 4 | IQ-domain 4 | 0.6 | 0.3 | -0.31 |
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76 | AT5G60910 | AGAMOUS-like 8 | AGAMOUS-like 8, FRUITFULL | 0.6 | 0.32 | -0.31 |
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77 | AT1G67770 | terminal EAR1-like 2 | terminal EAR1-like 2 | -0.6 | 0.32 | -0.31 |
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78 | AT2G12230 | pseudogene, C-1-tetrahydrofolate synthase, blastp match of 91% identity and 2.9e-07 P-value to GP|9843502|emb|CAC03667.1||AL133260 dJ292B18.2 (novel protein similar to methylenetetrahydrofolate dehydrogenase (NADP+ dependent), methenyltetrahydrofolate cyclohydrolase, formyltetrahydrofolate synthetase (MTHFD1) (EC 1.5.1.5, EC 3.5.4.9, EC-TRUNCATED- |
-0.6 | 0.31 | -0.33 |
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79 | AT5G44730 | Haloacid dehalogenase-like hydrolase (HAD) superfamily protein |
0.6 | 0.32 | -0.31 |
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80 | AT4G25010 | Nodulin MtN3 family protein | AtSWEET14, SWEET14 | -0.59 | 0.32 | -0.32 |
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81 | AT1G53820 | RING/U-box superfamily protein | -0.59 | 0.31 | -0.3 |
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82 | AT4G08790 | Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase family protein |
-0.59 | 0.32 | -0.3 |
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83 | AT2G42250 | cytochrome P450, family 712, subfamily A, polypeptide 1 | cytochrome P450, family 712, subfamily A, polypeptide 1 |
-0.59 | 0.3 | -0.31 |
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84 | AT2G34315 | Avirulence induced gene (AIG1) family protein | -0.59 | 0.33 | -0.29 |
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85 | AT3G03020 | unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; Has 5 Blast hits to 5 proteins in 1 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 5; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). |
0.59 | 0.31 | -0.32 |
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86 | AT3G59440 | Calcium-binding EF-hand family protein | 0.59 | 0.3 | -0.37 |
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87 | AT2G35030 | Pentatricopeptide repeat (PPR) superfamily protein | 0.59 | 0.32 | -0.31 |
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88 | AT3G56690 | Cam interacting protein 111 | Cam interacting protein 111 | 0.59 | 0.31 | -0.31 |
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89 | AT3G45510 | RING/U-box protein | 0.59 | 0.31 | -0.34 |
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90 | AT4G07640 | transposable element gene | -0.59 | 0.32 | -0.32 |
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91 | AT1G56380 | Mitochondrial transcription termination factor family protein |
-0.58 | 0.33 | -0.31 |
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92 | AT4G20470 | unknown protein; Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). |
-0.58 | 0.32 | -0.29 |
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93 | AT1G56410 | heat shock protein 70 (Hsp 70) family protein | EARLY-RESPONSIVE TO DEHYDRATION 2, HEAT SHOCK PROTEIN 70T-1 |
-0.58 | 0.31 | -0.33 |
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94 | AT5G07550 | glycine-rich protein 19 | ATGRP19, glycine-rich protein 19 | -0.58 | 0.31 | -0.3 |
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95 | AT1G68980 | Tetratricopeptide repeat (TPR)-like superfamily protein | -0.58 | 0.31 | -0.31 |
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96 | AT4G22950 | AGAMOUS-like 19 | AGAMOUS-like 19, GL19 | -0.58 | 0.31 | -0.31 |
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97 | AT5G43800 | transposable element gene | -0.58 | 0.31 | -0.33 |
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98 | AT1G04330 | unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G23170.1); Has 74 Blast hits to 74 proteins in 6 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 74; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). |
-0.58 | 0.3 | -0.32 |
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99 | AT1G27520 | Glycosyl hydrolase family 47 protein | -0.58 | 0.33 | -0.33 |
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100 | AT2G39280 | Ypt/Rab-GAP domain of gyp1p superfamily protein | -0.57 | 0.34 | -0.34 |
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101 | AT4G18090 | unknown protein; Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). |
-0.57 | 0.32 | -0.31 |
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102 | AT5G37960 | GroES-like family protein | -0.57 | 0.31 | -0.3 |
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103 | AT3G48210 | CONTAINS InterPro DOMAIN/s: Kinetochore-Ndc80 complex, subunit Spc25 (InterPro:IPR013255); Has 194 Blast hits to 194 proteins in 72 species: Archae - 0; Bacteria - 4; Metazoa - 72; Fungi - 39; Plants - 62; Viruses - 0; Other Eukaryotes - 17 (source: NCBI BLink). |
-0.57 | 0.3 | -0.34 |
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104 | AT1G72000 | Plant neutral invertase family protein | alkaline/neutral invertase F | -0.56 | 0.31 | -0.33 |
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105 | AT1G34545 | transposable element gene | -0.56 | 0.29 | -0.32 |
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106 | AT1G51290 | F-box and associated interaction domains-containing protein | -0.56 | 0.31 | -0.32 |
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107 | AT2G23400 | Undecaprenyl pyrophosphate synthetase family protein | -0.56 | 0.31 | -0.32 |
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108 | AT2G24370 | Protein kinase protein with adenine nucleotide alpha hydrolases-like domain |
-0.56 | 0.3 | -0.33 |
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109 | AT1G50080 | BEST Arabidopsis thaliana protein match is: RNA-directed DNA polymerase (reverse transcriptase)-related family protein (TAIR:AT1G60720.1); Has 42 Blast hits to 42 proteins in 4 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 42; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). |
-0.56 | 0.3 | -0.32 |
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110 | AT5G17150 | Cystatin/monellin superfamily protein | -0.56 | 0.3 | -0.29 |
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111 | AT1G60270 | beta glucosidase 6 | beta glucosidase 6 | -0.56 | 0.32 | -0.32 |
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112 | AT1G01450 | Protein kinase superfamily protein | -0.56 | 0.34 | -0.32 |
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CID | Metabolite name | Pathway Information | Correlation | link | ||||||
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Compound name | Stereochemistry | Aracyc name | pcc | 2.5% | 97.5% | PPI | ||||
113 | C0126 | Isorhamnetin-dirhamnoside | - | - | - | 0.72 | 0.41 | -0.45 | ||
114 | C0012 | n-Eicosanoic acid | - | Arachidate | fatty acid activation, fatty acid ω-oxidation, sporopollenin precursor biosynthesis, acyl-ACP thioesterase pathway, ceramide degradation, fatty acid α-oxidation, fatty acid ω-oxidation, phospholipases, triacylglycerol degradation |
0.66 | 0.42 | -0.46 |
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115 | C0001 | α-Linolenic acid | - | (9,12,15)-Linolenate | traumatin and (Z)-3-hexen-1-yl acetate biosynthesis, poly-hydroxy fatty acids biosynthesis, jasmonic acid biosynthesis |
0.65 | 0.43 | -0.44 |
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