AT4G04300 : -
Query Information
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AGICode AT4G04300
Description transposable element gene
Gene information
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  Gene Code Description / Information Gene name Correlation link
pcc 2.5% 97.5% PPI
1 AT4G04300 transposable element gene 1 0.31 -0.3
2 AT3G25210 Tetratricopeptide repeat (TPR)-like superfamily protein 0.75 0.29 -0.32
3 AT3G09320 DHHC-type zinc finger family protein 0.72 0.29 -0.32
4 AT1G34590 transposable element gene -0.7 0.29 -0.31
5 AT3G51550 Malectin/receptor-like protein kinase family protein FERONIA 0.69 0.3 -0.31
6 AT3G49510 F-box family protein 0.69 0.32 -0.32
7 AT2G15700 transposable element gene -0.68 0.32 -0.3
8 AT2G13335 transposable element gene 0.67 0.31 -0.3
9 AT2G19400 AGC (cAMP-dependent, cGMP-dependent and protein kinase C)
kinase family protein		 -0.67 0.31 -0.3
10 AT1G76920 F-box family protein 0.67 0.31 -0.31
11 AT5G61650 CYCLIN P4;2 CYCP4, CYCLIN P4;2 0.67 0.32 -0.3
12 AT2G40210 AGAMOUS-like 48 AGAMOUS-like 48 -0.67 0.33 -0.3
13 AT2G37320 Tetratricopeptide repeat (TPR)-like superfamily protein 0.66 0.3 -0.32
14 AT4G31280 unknown protein; Has 2 Blast hits to 2 proteins in 1
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 2; Viruses - 0; Other Eukaryotes - 0 (source: NCBI
BLink).		 -0.66 0.32 -0.31
15 AT4G02170 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT5G38700.1); Has 53 Blast hits
to 53 proteins in 10 species: Archae - 0; Bacteria - 0;
Metazoa - 0; Fungi - 0; Plants - 53; Viruses - 0; Other
Eukaryotes - 0 (source: NCBI BLink).		 0.66 0.32 -0.32
16 AT1G38340 transposable element gene -0.66 0.3 -0.3
17 AT1G52820 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase
superfamily protein		 -0.66 0.32 -0.33
18 AT5G46440 FUNCTIONS IN: molecular_function unknown; INVOLVED IN:
biological_process unknown; LOCATED IN: endomembrane
system; BEST Arabidopsis thaliana protein match is:
Pentatricopeptide repeat (PPR) superfamily protein
(TAIR:AT5G46460.1); Has 1807 Blast hits to 1807 proteins in
277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi
- 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339
(source: NCBI BLink).		 -0.66 0.33 -0.31
19 AT4G21130 Transducin/WD40 repeat-like superfamily protein EMBRYO DEFECTIVE 2271 0.66 0.31 -0.31
20 AT4G20490 transposable element gene -0.66 0.31 -0.31
21 AT1G75250 RAD-like 6 RAD-like 6, RAD-like 6,
RADIALIS-LIKE SANT/MYB 3		 0.66 0.31 -0.31
22 AT1G01310 CAP (Cysteine-rich secretory proteins, Antigen 5, and
Pathogenesis-related 1 protein) superfamily protein		 -0.66 0.33 -0.31
23 AT1G35995 transposable element gene 0.65 0.33 -0.31
24 AT5G02410 DIE2/ALG10 family homolog of yeast ALG10 -0.65 0.32 -0.34
25 AT2G39240 RNA polymerase I specific transcription initiation factor
RRN3 protein		 0.65 0.3 -0.3
26 AT4G20200 Terpenoid cyclases/Protein prenyltransferases superfamily
protein		 -0.65 0.32 -0.33
27 AT1G26270 Phosphatidylinositol 3- and 4-kinase family protein 0.65 0.29 -0.32
28 AT1G54390 PHD finger protein-related INHIBITOR OF GROWTH 2 -0.65 0.32 -0.33
29 AT3G43680 transposable element gene 0.65 0.33 -0.32
30 AT3G24330 O-Glycosyl hydrolases family 17 protein -0.64 0.29 -0.3
31 AT4G28720 Flavin-binding monooxygenase family protein YUCCA 8 0.64 0.32 -0.3
32 AT3G20990 transposable element gene 0.64 0.32 -0.31
33 AT4G07460 transposable element gene 0.64 0.3 -0.3
34 AT1G31040 PLATZ transcription factor family protein 0.64 0.28 -0.32
35 AT5G37640 ubiquitin 9 ubiquitin 9 0.63 0.32 -0.34
36 AT3G27550 RNA-binding CRS1 / YhbY (CRM) domain protein 0.63 0.33 -0.3
37 AT3G15390 silencing defective 5 silencing defective 5 -0.63 0.33 -0.29
38 AT3G23750 Leucine-rich repeat protein kinase family protein 0.63 0.33 -0.32
39 AT2G15880 Leucine-rich repeat (LRR) family protein 0.63 0.32 -0.29
40 AT2G14630 transposable element gene -0.63 0.3 -0.32
41 AT3G30843 transposable element gene 0.63 0.33 -0.3
42 AT1G61430 S-locus lectin protein kinase family protein 0.63 0.3 -0.31
43 AT5G61920 unknown protein; INVOLVED IN: biological_process unknown;
LOCATED IN: chloroplast; EXPRESSED IN: 6 plant structures;
EXPRESSED DURING: 4 anthesis, F mature embryo stage, petal
differentiation and expansion stage, E expanded cotyledon
stage, D bilateral stage; BEST Arabidopsis thaliana protein
match is: unknown protein (TAIR:AT1G67170.1); Has 1807
Blast hits to 1807 proteins in 277 species: Archae - 0;
Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385;
Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).		 0.63 0.33 -0.31
44 AT4G27550 trehalose-6-phosphatase synthase S4 ARABIDOPSIS THALIANA TREHALOSE
PHOSPHATASE/SYNTHASE 4,
trehalose-6-phosphatase synthase
S4		 -0.63 0.31 -0.33
45 AT2G19250 pseudogene, similar to Magnesium-chelatase subunit chlD,
chloroplast precursor (Mg- protoporphyrin IX chelatase)
(Mg-chelatase subunit D). (Common tobacco), similar to
SP|O24133 Magnesium-chelatase subunit chlD, chloroplast
precursor (Mg-protoporphyrin IX chelatase) (Mg-chelatase
subunit D) {Nicotiana tabacum}; blastp match of 78%
identity and 5.0e-07 P-value to SP|O24133|CHLD_TOBAC
Magnesium-chelatase subunit chlD, chloroplast precursor
(Mg- protoporphyrin IX chelatase) (Mg-chelatase subunit D).
(Common tobacco) {Nicotiana tabacum}		 -0.63 0.29 -0.31
46 AT2G37140 Terpenoid synthases superfamily protein 0.63 0.3 -0.32
47 AT4G39400 Leucine-rich receptor-like protein kinase family protein ATBRI1, BR INSENSITIVE 1,
BRASSINOSTEROID INSENSITIVE 1,
CABBAGE 2, DWARF 2		 0.62 0.32 -0.34
48 AT2G13150 Basic-leucine zipper (bZIP) transcription factor family
protein		 0.62 0.3 -0.31
49 AT5G49410 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT1G73940.1); Has 1807 Blast hits
to 1807 proteins in 277 species: Archae - 0; Bacteria - 0;
Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0;
Other Eukaryotes - 339 (source: NCBI BLink).		 0.62 0.33 -0.31
50 AT2G40440 BTB/POZ domain-containing protein -0.62 0.3 -0.32
51 AT1G34480 Cysteine/Histidine-rich C1 domain family protein -0.62 0.31 -0.34
52 AT5G49380 CONTAINS InterPro DOMAIN/s: Protein of unknown function
DUF625 (InterPro:IPR006887); BEST Arabidopsis thaliana
protein match is: binding (TAIR:AT3G06670.1); Has 1807
Blast hits to 1807 proteins in 277 species: Archae - 0;
Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385;
Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).		 -0.62 0.3 -0.32
53 AT2G15325 Bifunctional inhibitor/lipid-transfer protein/seed storage
2S albumin superfamily protein		 0.62 0.31 -0.32
54 AT2G22320 unknown protein; Has 7 Blast hits to 7 proteins in 4
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 7; Viruses - 0; Other Eukaryotes - 0 (source: NCBI
BLink).		 0.62 0.33 -0.3
55 AT2G39120 Ubiquitin carboxyl-terminal hydrolase family protein what's this factor 9 0.62 0.31 -0.34
56 AT1G19530 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: N-terminal protein myristoylation, anaerobic
respiration; LOCATED IN: cellular_component unknown;
EXPRESSED IN: leaf apex, inflorescence meristem, hypocotyl,
root, flower; EXPRESSED DURING: petal differentiation and
expansion stage; Has 47 Blast hits to 47 proteins in 13
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 47; Viruses - 0; Other Eukaryotes - 0 (source:
NCBI BLink).		 0.62 0.32 -0.31
57 AT2G20210 RNI-like superfamily protein 0.61 0.31 -0.29
58 AT2G07680 multidrug resistance-associated protein 11 ATP-binding cassette C13,
multidrug resistance-associated
protein 11, multidrug
resistance-associated protein 11		 -0.61 0.3 -0.3
59 AT4G35820 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase
superfamily protein		 -0.61 0.32 -0.31
60 AT3G58060 Cation efflux family protein 0.61 0.3 -0.3
61 AT3G44270 transposable element gene 0.61 0.33 -0.32
62 AT4G25360 TRICHOME BIREFRINGENCE-LIKE 18 TRICHOME BIREFRINGENCE-LIKE 18 0.61 0.32 -0.33
63 AT2G17960 unknown protein; Has 1 Blast hits to 1 proteins in 1
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 1; Viruses - 0; Other Eukaryotes - 0 (source: NCBI
BLink).		 -0.61 0.32 -0.32
64 AT5G39560 Galactose oxidase/kelch repeat superfamily protein -0.61 0.3 -0.31
65 AT1G46696 Protein of unknown function, DUF601 0.61 0.31 -0.33
66 AT1G51990 O-methyltransferase family protein -0.61 0.31 -0.31
67 AT2G10920 unknown protein; Has 5 Blast hits to 5 proteins in 1
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 5; Viruses - 0; Other Eukaryotes - 0 (source: NCBI
BLink).		 -0.61 0.32 -0.33
68 AT4G17245 RING/U-box superfamily protein 0.6 0.31 -0.3
69 AT2G32360 Ubiquitin-like superfamily protein -0.6 0.31 -0.32
70 AT4G05300 transposable element gene 0.6 0.3 -0.31
71 AT3G48480 Cysteine proteinases superfamily protein -0.6 0.33 -0.32
72 AT3G57050 cystathionine beta-lyase cystathionine beta-lyase -0.6 0.33 -0.32
73 AT3G03360 F-box/RNI-like superfamily protein -0.6 0.29 -0.31
74 AT1G43840 transposable element gene 0.6 0.32 -0.32
75 AT2G26410 IQ-domain 4 IQ-domain 4 0.6 0.3 -0.31
76 AT5G60910 AGAMOUS-like 8 AGAMOUS-like 8, FRUITFULL 0.6 0.32 -0.31
77 AT1G67770 terminal EAR1-like 2 terminal EAR1-like 2 -0.6 0.32 -0.31
78 AT2G12230 pseudogene, C-1-tetrahydrofolate synthase, blastp match of
91% identity and 2.9e-07 P-value to
GP|9843502|emb|CAC03667.1||AL133260 dJ292B18.2 (novel
protein similar to methylenetetrahydrofolate dehydrogenase
(NADP+ dependent), methenyltetrahydrofolate cyclohydrolase,
formyltetrahydrofolate synthetase (MTHFD1) (EC 1.5.1.5, EC
3.5.4.9, EC-TRUNCATED-		 -0.6 0.31 -0.33
79 AT5G44730 Haloacid dehalogenase-like hydrolase (HAD) superfamily
protein		 0.6 0.32 -0.31
80 AT4G25010 Nodulin MtN3 family protein AtSWEET14, SWEET14 -0.59 0.32 -0.32
81 AT1G53820 RING/U-box superfamily protein -0.59 0.31 -0.3
82 AT4G08790 Nitrilase/cyanide hydratase and apolipoprotein
N-acyltransferase family protein		 -0.59 0.32 -0.3
83 AT2G42250 cytochrome P450, family 712, subfamily A, polypeptide 1 cytochrome P450, family 712,
subfamily A, polypeptide 1		 -0.59 0.3 -0.31
84 AT2G34315 Avirulence induced gene (AIG1) family protein -0.59 0.33 -0.29
85 AT3G03020 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
chloroplast; EXPRESSED IN: 21 plant structures; EXPRESSED
DURING: 13 growth stages; Has 5 Blast hits to 5 proteins in
1 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi -
0; Plants - 5; Viruses - 0; Other Eukaryotes - 0 (source:
NCBI BLink).		 0.59 0.31 -0.32
86 AT3G59440 Calcium-binding EF-hand family protein 0.59 0.3 -0.37
87 AT2G35030 Pentatricopeptide repeat (PPR) superfamily protein 0.59 0.32 -0.31
88 AT3G56690 Cam interacting protein 111 Cam interacting protein 111 0.59 0.31 -0.31
89 AT3G45510 RING/U-box protein 0.59 0.31 -0.34
90 AT4G07640 transposable element gene -0.59 0.32 -0.32
91 AT1G56380 Mitochondrial transcription termination factor family
protein		 -0.58 0.33 -0.31
92 AT4G20470 unknown protein; Has 1807 Blast hits to 1807 proteins in
277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi
- 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339
(source: NCBI BLink).		 -0.58 0.32 -0.29
93 AT1G56410 heat shock protein 70 (Hsp 70) family protein EARLY-RESPONSIVE TO DEHYDRATION 2,
HEAT SHOCK PROTEIN 70T-1		 -0.58 0.31 -0.33
94 AT5G07550 glycine-rich protein 19 ATGRP19, glycine-rich protein 19 -0.58 0.31 -0.3
95 AT1G68980 Tetratricopeptide repeat (TPR)-like superfamily protein -0.58 0.31 -0.31
96 AT4G22950 AGAMOUS-like 19 AGAMOUS-like 19, GL19 -0.58 0.31 -0.31
97 AT5G43800 transposable element gene -0.58 0.31 -0.33
98 AT1G04330 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
chloroplast; BEST Arabidopsis thaliana protein match is:
unknown protein (TAIR:AT3G23170.1); Has 74 Blast hits to 74
proteins in 6 species: Archae - 0; Bacteria - 0; Metazoa -
0; Fungi - 0; Plants - 74; Viruses - 0; Other Eukaryotes -
0 (source: NCBI BLink).		 -0.58 0.3 -0.32
99 AT1G27520 Glycosyl hydrolase family 47 protein -0.58 0.33 -0.33
100 AT2G39280 Ypt/Rab-GAP domain of gyp1p superfamily protein -0.57 0.34 -0.34
101 AT4G18090 unknown protein; Has 1807 Blast hits to 1807 proteins in
277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi
- 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339
(source: NCBI BLink).		 -0.57 0.32 -0.31
102 AT5G37960 GroES-like family protein -0.57 0.31 -0.3
103 AT3G48210 CONTAINS InterPro DOMAIN/s: Kinetochore-Ndc80 complex,
subunit Spc25 (InterPro:IPR013255); Has 194 Blast hits to
194 proteins in 72 species: Archae - 0; Bacteria - 4;
Metazoa - 72; Fungi - 39; Plants - 62; Viruses - 0; Other
Eukaryotes - 17 (source: NCBI BLink).		 -0.57 0.3 -0.34
104 AT1G72000 Plant neutral invertase family protein alkaline/neutral invertase F -0.56 0.31 -0.33
105 AT1G34545 transposable element gene -0.56 0.29 -0.32
106 AT1G51290 F-box and associated interaction domains-containing protein -0.56 0.31 -0.32
107 AT2G23400 Undecaprenyl pyrophosphate synthetase family protein -0.56 0.31 -0.32
108 AT2G24370 Protein kinase protein with adenine nucleotide alpha
hydrolases-like domain		 -0.56 0.3 -0.33
109 AT1G50080 BEST Arabidopsis thaliana protein match is: RNA-directed
DNA polymerase (reverse transcriptase)-related family
protein (TAIR:AT1G60720.1); Has 42 Blast hits to 42
proteins in 4 species: Archae - 0; Bacteria - 0; Metazoa -
0; Fungi - 0; Plants - 42; Viruses - 0; Other Eukaryotes -
0 (source: NCBI BLink).		 -0.56 0.3 -0.32
110 AT5G17150 Cystatin/monellin superfamily protein -0.56 0.3 -0.29
111 AT1G60270 beta glucosidase 6 beta glucosidase 6 -0.56 0.32 -0.32
112 AT1G01450 Protein kinase superfamily protein -0.56 0.34 -0.32
Metabolite information
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  CID Metabolite name Pathway Information Correlation link
Compound name Stereochemistry Aracyc name pcc 2.5% 97.5% PPI
113 C0126 Isorhamnetin-dirhamnoside - - - 0.72 0.41 -0.45
114 C0012 n-Eicosanoic acid - Arachidate fatty acid activation,
fatty acid ω-oxidation,
sporopollenin precursor biosynthesis,
acyl-ACP thioesterase pathway,
ceramide degradation,
fatty acid α-oxidation,
fatty acid ω-oxidation,
phospholipases,
triacylglycerol degradation 		0.66 0.42 -0.46 C0012
115 C0001 α-Linolenic acid - (9,12,15)-Linolenate traumatin and (Z)-3-hexen-1-yl acetate biosynthesis,
poly-hydroxy fatty acids biosynthesis,
jasmonic acid biosynthesis 		0.65 0.43 -0.44 C0001