AT4G04420 : -
Query Information
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AGICode AT4G04420
Description transposable element gene
Gene information
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  Gene Code Description / Information Gene name Correlation link
pcc 2.5% 97.5% PPI
1 AT4G04420 transposable element gene 1 0.33 -0.33
2 AT3G60260 ELMO/CED-12 family protein -0.78 0.31 -0.3
3 AT1G49370 pseudogene, similar to OSJNBa0072F16.8, blastp match of 42%
identity and 6.6e-73 P-value to
GP|21739229|emb|CAD40984.1||AL606460 OSJNBa0072F16.8 {Oryza
sativa (japonica cultivar-group)}		 0.77 0.31 -0.33
4 AT4G23110 insulin-like growth factor binding 0.74 0.34 -0.34
5 AT1G63030 Integrase-type DNA-binding superfamily protein DWARF AND DELAYED FLOWERING 2 -0.74 0.31 -0.32
6 AT5G39560 Galactose oxidase/kelch repeat superfamily protein 0.73 0.32 -0.32
7 AT5G13570 decapping 2 ATDCP2, decapping 2, TRIDENT -0.72 0.35 -0.34
8 AT1G22290 14-3-3 family protein 0.72 0.33 -0.31
9 AT4G20200 Terpenoid cyclases/Protein prenyltransferases superfamily
protein		 0.71 0.3 -0.32
10 AT1G10980 Lung seven transmembrane receptor family protein 0.71 0.31 -0.31
11 AT3G25950 TRAM, LAG1 and CLN8 (TLC) lipid-sensing domain containing
protein		 0.71 0.32 -0.34
12 AT1G48095 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT1G36960.1); Has 82 Blast hits
to 82 proteins in 3 species: Archae - 0; Bacteria - 0;
Metazoa - 0; Fungi - 0; Plants - 82; Viruses - 0; Other
Eukaryotes - 0 (source: NCBI BLink).		 0.7 0.31 -0.32
13 AT4G35590 RWP-RK domain-containing protein RWP-RK domain-containing 5 0.7 0.32 -0.33
14 AT2G42410 zinc finger protein 11 ZINC FINGER PROTEIN 11, zinc
finger protein 11		 0.69 0.32 -0.31
15 AT2G40440 BTB/POZ domain-containing protein 0.69 0.3 -0.33
16 AT1G61750 Receptor-like protein kinase-related family protein -0.69 0.3 -0.33
17 AT1G68360 C2H2 and C2HC zinc fingers superfamily protein -0.69 0.31 -0.31
18 AT3G07400 lipase class 3 family protein 0.68 0.31 -0.3
19 AT4G33070 Thiamine pyrophosphate dependent pyruvate decarboxylase
family protein		 -0.68 0.34 -0.32
20 AT1G54720 early-responsive to dehydration protein-related / ERD
protein-related		 0.68 0.29 -0.32
21 AT2G24320 alpha/beta-Hydrolases superfamily protein 0.68 0.3 -0.32
22 AT1G31260 zinc transporter 10 precursor zinc transporter 10 precursor -0.67 0.31 -0.32
23 AT4G20290 unknown protein; Has 30201 Blast hits to 17322 proteins in
780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338;
Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes
- 2996 (source: NCBI BLink).		 -0.67 0.31 -0.32
24 AT1G53840 pectin methylesterase 1 pectin methylesterase 1, pectin
methylesterase 1		 -0.67 0.3 -0.31
25 AT3G49740 Tetratricopeptide repeat (TPR)-like superfamily protein 0.67 0.31 -0.32
26 AT4G14460 transposable element gene 0.67 0.31 -0.31
27 AT5G02690 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
endomembrane system; EXPRESSED IN: 11 plant structures;
EXPRESSED DURING: 9 growth stages; Has 2 Blast hits to 2
proteins in 1 species: Archae - 0; Bacteria - 0; Metazoa -
0; Fungi - 0; Plants - 2; Viruses - 0; Other Eukaryotes - 0
(source: NCBI BLink).		 0.67 0.31 -0.31
28 AT3G31360 transposable element gene 0.67 0.3 -0.3
29 AT1G76870 BEST Arabidopsis thaliana protein match is:
sequence-specific DNA binding transcription factors
(TAIR:AT1G21200.1); Has 406 Blast hits to 351 proteins in
76 species: Archae - 0; Bacteria - 2; Metazoa - 137; Fungi
- 14; Plants - 127; Viruses - 0; Other Eukaryotes - 126
(source: NCBI BLink).		 0.67 0.3 -0.31
30 AT1G77820 transposable element gene 0.66 0.31 -0.31
31 AT2G01310 BEST Arabidopsis thaliana protein match is:
cyclin-dependent protein kinase 3;2 (TAIR:AT1G47210.1); Has
37 Blast hits to 37 proteins in 6 species: Archae - 0;
Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 37; Viruses
- 0; Other Eukaryotes - 0 (source: NCBI BLink).		 -0.66 0.3 -0.32
32 AT3G51760 Protein of unknown function (DUF688) -0.66 0.31 -0.32
33 AT1G23610 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT1G23640.1); Has 30201 Blast
hits to 17322 proteins in 780 species: Archae - 12;
Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants -
5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI
BLink).		 0.66 0.34 -0.35
34 AT4G02170 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT5G38700.1); Has 53 Blast hits
to 53 proteins in 10 species: Archae - 0; Bacteria - 0;
Metazoa - 0; Fungi - 0; Plants - 53; Viruses - 0; Other
Eukaryotes - 0 (source: NCBI BLink).		 -0.66 0.33 -0.32
35 AT4G22780 ACT domain repeat 7 ACT domain repeat 7 -0.66 0.32 -0.34
36 AT2G13230 transposable element gene -0.66 0.32 -0.29
37 AT2G05900 SET domain protein 11 SET domain protein 11, SU(VAR)3-9
HOMOLOG 10		 0.66 0.3 -0.3
38 AT4G17260 Lactate/malate dehydrogenase family protein -0.66 0.31 -0.34
39 AT2G35160 SU(VAR)3-9 homolog 5 SET DOMAIN-CONTAINING PROTEIN 9,
SU(VAR)3-9 homolog 5		 0.66 0.32 -0.34
40 AT4G23950 Galactose-binding protein 0.66 0.33 -0.31
41 AT1G45976 S-ribonuclease binding protein 1 S-ribonuclease binding protein 1 -0.66 0.34 -0.29
42 AT3G51590 lipid transfer protein 12 lipid transfer protein 12 0.65 0.31 -0.33
43 AT5G62520 similar to RCD one 5 similar to RCD one 5 -0.65 0.29 -0.31
44 AT3G61940 Cation efflux family protein ATMTPA1, MTPA1 0.65 0.32 -0.31
45 AT3G44740 Class II aaRS and biotin synthetases superfamily protein 0.65 0.31 -0.32
46 AT5G19480 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT5G12230.1); Has 1807 Blast hits
to 1807 proteins in 277 species: Archae - 0; Bacteria - 0;
Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0;
Other Eukaryotes - 339 (source: NCBI BLink).		 -0.65 0.33 -0.32
47 AT5G35420 transposable element gene 0.64 0.32 -0.32
48 AT3G42090 transposable element gene 0.64 0.31 -0.3
49 AT5G37640 ubiquitin 9 ubiquitin 9 -0.64 0.31 -0.33
50 AT3G54490 RNA polymerase II fifth largest subunit, E RNA polymerase II fifth largest
subunit, E		 0.64 0.31 -0.32
51 AT4G29230 NAC domain containing protein 75 NAC domain containing protein 75,
NAC domain containing protein 75		 -0.64 0.29 -0.32
52 AT2G32360 Ubiquitin-like superfamily protein 0.64 0.34 -0.3
53 AT1G21010 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: N-terminal protein myristoylation; LOCATED IN:
cellular_component unknown; EXPRESSED IN: 24 plant
structures; EXPRESSED DURING: 14 growth stages; BEST
Arabidopsis thaliana protein match is: unknown protein
(TAIR:AT1G76600.1); Has 206 Blast hits to 206 proteins in
13 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi -
0; Plants - 206; Viruses - 0; Other Eukaryotes - 0 (source:
NCBI BLink).		 -0.64 0.33 -0.29
54 AT3G06230 MAP kinase kinase 8 MAP kinase kinase 8, MAP kinase
kinase 8		 0.64 0.31 -0.32
55 AT4G37780 myb domain protein 87 ATMYB87, myb domain protein 87 -0.64 0.32 -0.32
56 AT5G28620 protein kinase C-related -0.64 0.29 -0.32
57 AT2G30400 ovate family protein 2 ARABIDOPSIS THALIANA OVATE FAMILY
PROTEIN 2, ovate family protein 2		 -0.64 0.34 -0.31
58 AT3G13620 Amino acid permease family protein -0.64 0.33 -0.3
59 AT1G31814 FRIGIDA like 2 FRIGIDA like 2 0.64 0.33 -0.31
60 AT1G66550 WRKY DNA-binding protein 67 ATWRKY67, WRKY DNA-binding protein
67		 0.64 0.31 -0.31
61 AT2G43150 Proline-rich extensin-like family protein 0.64 0.33 -0.31
62 AT5G01550 lectin receptor kinase a4.1 lectin receptor kinase a4.1 0.64 0.32 -0.32
63 AT5G38580 FBD-like domain family protein 0.63 0.3 -0.31
64 AT2G06230 transposable element gene 0.63 0.3 -0.32
65 AT5G48290 Heavy metal transport/detoxification superfamily protein 0.63 0.33 -0.31
66 AT1G41870 transposable element gene 0.63 0.33 -0.32
67 AT4G12040 A20/AN1-like zinc finger family protein AtSAP7, stress-associated protein
7		 -0.63 0.34 -0.33
68 AT1G24010 Polyketide cyclase/dehydrase and lipid transport
superfamily protein		 0.63 0.31 -0.31
69 AT4G21560 vacuolar protein sorting-associated protein 28 homolog 1 vacuolar protein sorting 28,
vacuolar protein
sorting-associated protein 28
homolog 1		 -0.63 0.32 -0.33
70 AT2G03540 transposable element gene -0.63 0.33 -0.31
71 AT2G17660 RPM1-interacting protein 4 (RIN4) family protein -0.63 0.32 -0.32
72 AT1G79660 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT1G16170.1); Has 30201 Blast
hits to 17322 proteins in 780 species: Archae - 12;
Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants -
5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI
BLink).		 -0.62 0.32 -0.33
73 AT3G48530 SNF1-related protein kinase regulatory subunit gamma 1 SNF1-related protein kinase
regulatory subunit gamma 1		 -0.62 0.33 -0.33
74 AT3G18120 F-box associated ubiquitination effector family protein 0.62 0.32 -0.31
75 AT1G21210 wall associated kinase 4 wall associated kinase 4 0.62 0.33 -0.32
76 AT1G02660 alpha/beta-Hydrolases superfamily protein -0.62 0.32 -0.33
77 AT1G66960 Terpenoid cyclases family protein LUP5 0.62 0.31 -0.32
78 AT3G19680 Protein of unknown function (DUF1005) -0.62 0.32 -0.32
79 AT4G00280 BEST Arabidopsis thaliana protein match is: Leucine-rich
repeat transmembrane protein kinase protein
(TAIR:AT2G19210.1); Has 19 Blast hits to 19 proteins in 2
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 19; Viruses - 0; Other Eukaryotes - 0 (source:
NCBI BLink).		 0.62 0.33 -0.32
80 AT3G29660 transposable element gene -0.62 0.32 -0.32
81 AT5G10950 Tudor/PWWP/MBT superfamily protein -0.61 0.32 -0.31
82 AT3G23330 Tetratricopeptide repeat (TPR)-like superfamily protein 0.61 0.3 -0.31
83 AT5G14240 Thioredoxin superfamily protein -0.61 0.32 -0.34
84 AT2G26430 arginine-rich cyclin 1 ARGININE-RICH CYCLIN 1,
arginine-rich cyclin 1		 -0.61 0.33 -0.34
85 AT4G20310 Peptidase M50 family protein 0.61 0.33 -0.31
86 AT2G34370 Pentatricopeptide repeat (PPR) superfamily protein 0.61 0.31 -0.32
87 AT5G08139 RING/U-box superfamily protein -0.61 0.31 -0.29
88 AT1G43700 VIRE2-interacting protein 1 sulphate utilization efficiency 3,
VIRE2-interacting protein 1		 -0.61 0.28 -0.31
89 AT5G02550 unknown protein; Has 3 Blast hits to 3 proteins in 1
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 3; Viruses - 0; Other Eukaryotes - 0 (source: NCBI
BLink).		 -0.61 0.3 -0.32
90 AT2G15270 unknown protein; CONTAINS InterPro DOMAIN/s: Protein of
unknown function DUF1168 (InterPro:IPR009548); Has 1930
Blast hits to 1364 proteins in 219 species: Archae - 0;
Bacteria - 44; Metazoa - 762; Fungi - 280; Plants - 96;
Viruses - 3; Other Eukaryotes - 745 (source: NCBI BLink).		 -0.61 0.31 -0.32
91 AT5G06265 hyaluronan mediated motility receptor-related 0.61 0.3 -0.31
92 AT3G15040 Protein of unknown function, DUF584 -0.61 0.32 -0.32
93 AT5G44730 Haloacid dehalogenase-like hydrolase (HAD) superfamily
protein		 -0.61 0.3 -0.31
94 AT3G17010 AP2/B3-like transcriptional factor family protein 0.6 0.3 -0.32
95 AT5G16110 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
chloroplast; EXPRESSED IN: 24 plant structures; EXPRESSED
DURING: 15 growth stages; BEST Arabidopsis thaliana protein
match is: unknown protein (TAIR:AT3G02555.1); Has 133 Blast
hits to 133 proteins in 18 species: Archae - 0; Bacteria -
0; Metazoa - 0; Fungi - 0; Plants - 133; Viruses - 0; Other
Eukaryotes - 0 (source: NCBI BLink).		 -0.6 0.31 -0.32
96 AT5G39660 cycling DOF factor 2 cycling DOF factor 2 -0.6 0.32 -0.31
97 AT2G36700 Pectin lyase-like superfamily protein 0.6 0.32 -0.32
98 AT5G09950 Tetratricopeptide repeat (TPR)-like superfamily protein -0.6 0.32 -0.3
99 AT3G05500 Rubber elongation factor protein (REF) -0.6 0.33 -0.31
100 AT4G08210 Pentatricopeptide repeat (PPR-like) superfamily protein 0.6 0.3 -0.33
101 AT1G11900 Tetratricopeptide repeat (TPR)-like superfamily protein -0.6 0.3 -0.32
102 AT5G48270 Plant protein of unknown function (DUF868) 0.6 0.31 -0.32
103 AT4G28720 Flavin-binding monooxygenase family protein YUCCA 8 -0.6 0.31 -0.32
104 AT4G34440 Protein kinase superfamily protein proline-rich extensin-like
receptor kinase 5, proline-rich
extensin-like receptor kinase 5		 0.6 0.31 -0.32
105 AT1G03610 Protein of unknown function (DUF789) -0.6 0.32 -0.3
106 AT3G26140 Cellulase (glycosyl hydrolase family 5) protein 0.6 0.32 -0.3
107 AT4G30440 UDP-D-glucuronate 4-epimerase 1 UDP-D-glucuronate 4-epimerase 1 -0.6 0.33 -0.33
108 AT2G38830 Ubiquitin-conjugating enzyme/RWD-like protein -0.6 0.32 -0.3
109 AT1G24060 unknown protein; Has 7 Blast hits to 7 proteins in 2
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 7; Viruses - 0; Other Eukaryotes - 0 (source: NCBI
BLink).		 -0.59 0.32 -0.33
110 AT4G00940 Dof-type zinc finger DNA-binding family protein -0.59 0.34 -0.31
111 AT4G29140 MATE efflux family protein ACTIVATED DISEASE SUSCEPTIBILITY 1 -0.59 0.31 -0.33
112 AT2G46260 BTB/POZ/Kelch-associated protein -0.59 0.3 -0.34
113 AT1G17730 vacuolar protein sorting 46.1 CHARGED MULTIVESICULAR BODY
PROTEIN/CHROMATIN MODIFYING
PROTEIN1B, vacuolar protein
sorting 46.1		 -0.59 0.32 -0.32
114 AT1G33910 P-loop containing nucleoside triphosphate hydrolases
superfamily protein		 -0.59 0.3 -0.3