AT4G04530 : -
Query Information
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AGICode AT4G04530
Description transposable element gene
Gene information
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  Gene Code Description / Information Gene name Correlation link
pcc 2.5% 97.5% PPI
1 AT4G04530 transposable element gene 1 0.31 -0.35
2 AT2G32980 unknown protein; Has 158 Blast hits to 154 proteins in 73
species: Archae - 0; Bacteria - 61; Metazoa - 0; Fungi - 0;
Plants - 55; Viruses - 28; Other Eukaryotes - 14 (source:
NCBI BLink).		 0.72 0.31 -0.34
3 AT3G50170 Plant protein of unknown function (DUF247) 0.69 0.35 -0.3
4 AT1G03960 Calcium-binding EF hand family protein -0.65 0.32 -0.32
5 AT2G10400 transposable element gene 0.65 0.31 -0.32
6 AT3G60760 unknown protein; Has 1 Blast hits to 1 proteins in 1
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 1; Viruses - 0; Other Eukaryotes - 0 (source: NCBI
BLink).		 -0.64 0.32 -0.32
7 AT1G49350 pfkB-like carbohydrate kinase family protein 0.64 0.31 -0.32
8 AT1G09020 homolog of yeast sucrose nonfermenting 4 ATSNF4, homolog of yeast sucrose
nonfermenting 4		 -0.63 0.33 -0.31
9 AT1G26860 transposable element gene 0.62 0.3 -0.33
10 AT1G32850 ubiquitin-specific protease 11 ubiquitin-specific protease 11 -0.62 0.3 -0.32
11 AT1G22015 Galactosyltransferase family protein DD46 0.62 0.31 -0.29
12 AT2G45610 alpha/beta-Hydrolases superfamily protein -0.61 0.31 -0.28
13 AT3G15980 Coatomer, beta' subunit -0.61 0.34 -0.32
14 AT2G02560 cullin-associated and neddylation dissociated CULLIN-ASSOCIATED AND NEDDYLATION
DISSOCIATED 1, cullin-associated
and neddylation dissociated, ETA2,
HEMIVENATA, TIP120		 -0.61 0.31 -0.31
15 AT5G10090 Tetratricopeptide repeat (TPR)-like superfamily protein tetratricopeptide repeat 13 0.61 0.32 -0.3
16 AT2G32350 Ubiquitin-like superfamily protein -0.6 0.3 -0.33
17 AT3G03810 O-fucosyltransferase family protein embryo sac development arrest 30 -0.6 0.31 -0.3
18 AT3G24460 Serinc-domain containing serine and sphingolipid
biosynthesis protein		 -0.59 0.31 -0.3
19 AT4G29000 Tesmin/TSO1-like CXC domain-containing protein 0.59 0.3 -0.32
20 AT5G08100 N-terminal nucleophile aminohydrolases (Ntn hydrolases)
superfamily protein		 asparaginase A1 0.59 0.3 -0.31
21 AT1G27600 Nucleotide-diphospho-sugar transferases superfamily protein IRREGULAR XYLEM 9 Homolog,
IRREGULAR XYLEM 9-LIKE		 0.59 0.31 -0.34
22 AT2G36840 ACT-like superfamily protein ACT domain repeats 10 0.59 0.29 -0.34
23 AT2G23800 geranylgeranyl pyrophosphate synthase 2 geranylgeranyl pyrophosphate
synthase 2, GERANYLGERANYL
PYROPHOSPHATE SYNTHASE 5		 0.59 0.32 -0.31
24 AT3G43120 SAUR-like auxin-responsive protein family -0.59 0.31 -0.32
25 AT3G31920 transposable element gene -0.59 0.31 -0.34
26 AT1G76810 eukaryotic translation initiation factor 2 (eIF-2) family
protein		 -0.58 0.32 -0.31
27 AT2G02720 Pectate lyase family protein 0.58 0.3 -0.33
28 AT1G60350 NAC domain containing protein 24 NAC domain containing protein 24,
NAC domain containing protein 24		 0.58 0.33 -0.28
29 AT4G20470 unknown protein; Has 1807 Blast hits to 1807 proteins in
277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi
- 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339
(source: NCBI BLink).		 -0.58 0.32 -0.33
30 AT5G50500 unknown protein; Has 1807 Blast hits to 1807 proteins in
277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi
- 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339
(source: NCBI BLink).		 -0.58 0.32 -0.32
31 AT5G53060 RNA-binding KH domain-containing protein -0.58 0.31 -0.31
32 AT4G23090 unknown protein; Has 7 Blast hits to 7 proteins in 2
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 7; Viruses - 0; Other Eukaryotes - 0 (source: NCBI
BLink).		 0.58 0.32 -0.31
33 AT5G58270 ABC transporter of the mitochondrion 3 ATP-binding cassette B25,
ARABIDOPSIS THALIANA ABC
TRANSPORTER OF THE MITOCHONDRION
3, ABC transporter of the
mitochondrion 3, STARIK 1		 -0.58 0.33 -0.31
34 AT1G75550 glycine-rich protein -0.58 0.29 -0.33
35 AT3G29732 transposable element gene 0.58 0.31 -0.33
36 AT2G13550 unknown protein; Has 23 Blast hits to 20 proteins in 10
species: Archae - 0; Bacteria - 0; Metazoa - 10; Fungi - 0;
Plants - 4; Viruses - 0; Other Eukaryotes - 9 (source: NCBI
BLink).		 -0.57 0.3 -0.29
37 AT4G29710 Alkaline-phosphatase-like family protein 0.57 0.31 -0.28
38 AT1G41797 transposable element gene 0.57 0.33 -0.29
39 AT3G15490 Regulator of Vps4 activity in the MVB pathway protein -0.56 0.31 -0.3
40 AT1G21220 transposable element gene 0.56 0.3 -0.32
41 AT1G07980 nuclear factor Y, subunit C10 nuclear factor Y, subunit C10 0.56 0.32 -0.32
42 AT5G36190 FUNCTIONS IN: molecular_function unknown; INVOLVED IN:
biological_process unknown; LOCATED IN: endomembrane
system; BEST Arabidopsis thaliana protein match is: F-box
and associated interaction domains-containing protein
(TAIR:AT5G36200.1); Has 1807 Blast hits to 1807 proteins in
277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi
- 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339
(source: NCBI BLink).		 0.56 0.31 -0.33
43 AT2G06140 transposable element gene 0.56 0.3 -0.31
44 AT5G13790 AGAMOUS-like 15 AGAMOUS-like 15 0.56 0.3 -0.34
45 AT1G43810 unknown protein; Has 6 Blast hits to 6 proteins in 2
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 6; Viruses - 0; Other Eukaryotes - 0 (source: NCBI
BLink).		 -0.56 0.32 -0.31
46 AT2G44180 methionine aminopeptidase 2A methionine aminopeptidase 2A 0.55 0.29 -0.3
47 AT1G37060 transposable element gene -0.55 0.32 -0.32
48 AT4G17690 Peroxidase superfamily protein 0.55 0.31 -0.33
49 AT4G00190 pectin methylesterase 38 A. THALIANA PECTIN METHYLESTERASE
38, pectin methylesterase 38		 0.55 0.3 -0.3
50 AT3G42700 transposable element gene -0.55 0.3 -0.34
51 AT2G46000 FUNCTIONS IN: molecular_function unknown; INVOLVED IN:
biological_process unknown; LOCATED IN: endomembrane
system; EXPRESSED IN: 24 plant structures; EXPRESSED
DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s:
Mesoderm development candidate 2 (InterPro:IPR019330); Has
31 Blast hits to 31 proteins in 13 species: Archae - 0;
Bacteria - 0; Metazoa - 5; Fungi - 0; Plants - 26; Viruses
- 0; Other Eukaryotes - 0 (source: NCBI BLink).		 0.55 0.32 -0.32
52 AT1G31270 unknown protein; Has 0 Blast hits to 0 proteins in 0
species (source: NCBI BLink).		 -0.55 0.31 -0.34
53 AT4G36000 Pathogenesis-related thaumatin superfamily protein 0.55 0.33 -0.31
54 AT3G60240 eukaryotic translation initiation factor 4G CUCUMOVIRUS MULTIPLICATION 2,
eukaryotic translation initiation
factor 4G		 -0.55 0.34 -0.3
55 AT3G56890 F-box associated ubiquitination effector family protein -0.55 0.31 -0.31
56 AT4G23440 Disease resistance protein (TIR-NBS class) 0.55 0.33 -0.31
57 AT1G35513 pseudogene of isochorismate synthase-related /
isochorismate mutase-related		 -0.55 0.31 -0.34
58 AT1G63550 Receptor-like protein kinase-related family protein -0.54 0.33 -0.32
59 AT4G13230 Late embryogenesis abundant protein (LEA) family protein 0.54 0.3 -0.3
60 AT1G13610 alpha/beta-Hydrolases superfamily protein 0.54 0.31 -0.31
61 AT2G42240 RNA-binding (RRM/RBD/RNP motifs) family protein 0.54 0.32 -0.31
62 AT5G19640 Major facilitator superfamily protein 0.53 0.33 -0.32
63 AT3G60680 Plant protein of unknown function (DUF641) -0.53 0.33 -0.31
64 AT4G18330 Translation elongation factor EF1A/initiation factor
IF2gamma family protein		 0.53 0.29 -0.3
65 AT3G20040 Hexokinase ATHXK4, HEXOKINASE-LIKE 2 -0.53 0.32 -0.3
66 AT5G46940 Plant invertase/pectin methylesterase inhibitor superfamily
protein		 -0.53 0.32 -0.32
67 AT3G04220 Disease resistance protein (TIR-NBS-LRR class) family -0.53 0.31 -0.31
68 AT5G01280 BEST Arabidopsis thaliana protein match is: proline-rich
family protein (TAIR:AT3G09000.1); Has 1807 Blast hits to
1807 proteins in 277 species: Archae - 0; Bacteria - 0;
Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0;
Other Eukaryotes - 339 (source: NCBI BLink).		 -0.53 0.33 -0.34
69 AT3G63020 Protein of unknown function (DUF3049) -0.53 0.3 -0.34
70 AT4G07540 transposable element gene 0.53 0.32 -0.35
71 AT1G06340 Plant Tudor-like protein -0.53 0.32 -0.31
72 AT4G27910 SET domain protein 16 ATX4, SET domain protein 16 -0.53 0.32 -0.32
73 AT5G54890 RNA-binding CRS1 / YhbY (CRM) domain-containing protein -0.52 0.32 -0.3
74 AT5G43900 myosin 2 ARABIDOPSIS MYOSIN 2, myosin 2,
MYOSIN X1 2, MYOSIN XI-6		 -0.52 0.3 -0.33
75 AT2G07360 SH3 domain-containing protein -0.52 0.29 -0.31
76 AT2G15340 glycine-rich protein -0.52 0.31 -0.32
77 AT3G23460 S-adenosyl-L-methionine-dependent methyltransferases
superfamily protein		 0.52 0.3 -0.31
78 AT4G05640 transposable element gene 0.52 0.33 -0.3
79 AT5G45180 Flavin-binding monooxygenase family protein -0.51 0.32 -0.31
80 AT5G57260 cytochrome P450, family 71, subfamily B, polypeptide 10 cytochrome P450, family 71,
subfamily B, polypeptide 10		 0.51 0.31 -0.29
81 AT4G04440 transposable element gene 0.51 0.3 -0.33
82 AT1G53165 Protein kinase superfamily protein ATMAP4K ALPHA1 -0.51 0.31 -0.33
83 AT3G10400 RNA recognition motif and CCHC-type zinc finger domains
containing protein		 U11/U12-31K 0.51 0.31 -0.32
84 AT5G63730 IBR domain-containing protein ARIADNE 14, ARABIDOPSIS ARIADNE 14 0.51 0.29 -0.31
85 AT1G02575 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT1G02570.1).		 -0.51 0.34 -0.33
86 AT1G60450 galactinol synthase 7 galactinol synthase 7, galactinol
synthase 7		 -0.51 0.32 -0.33
87 AT3G59180 Protein with RNI-like/FBD-like domains 0.51 0.31 -0.34
88 AT3G43790 zinc induced facilitator-like 2 zinc induced facilitator-like 2 0.5 0.31 -0.32
89 AT1G10520 DNA polymerase lambda (POLL) AtPol{lambda}, DNA polymerase
{lambda}		 0.5 0.32 -0.32
90 AT1G18030 Protein phosphatase 2C family protein 0.5 0.29 -0.32
Metabolite information
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  CID Metabolite name Pathway Information Correlation link
Compound name Stereochemistry Aracyc name pcc 2.5% 97.5% PPI
91 C0228 Ribose-5-phosphate D-Ribose-5-phosphate D-Ribose-5-phosphate PRPP biosynthesis I,
Calvin-Benson-Bassham cycle,
trans-zeatin biosynthesis,
pentose phosphate pathway (non-oxidative branch),
pyridine nucleotide cycling (plants),
Rubisco shunt,
ribose degradation,
pyridoxal 5'-phosphate biosynthesis II 		0.81 0.45 -0.44 C0228
92 C0065 Cellobiose D-(+)-Cellobiose Cellobiose xyloglucan biosynthesis,
starch degradation I 		-0.6 0.3 -0.32 C0065