AT4G03990 : -
Query Information
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AGICode AT4G03990
Description transposable element gene
Gene information
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  Gene Code Description / Information Gene name Correlation link
pcc 2.5% 97.5% PPI
1 AT4G03990 transposable element gene 1 0.32 -0.32
2 AT3G12690 AGC kinase 1.5 AGC kinase 1.5 0.73 0.33 -0.3
3 AT2G40030 nuclear RNA polymerase D1B ATNRPD1B, DEFECTIVE IN MERISTEM
SILENCING 5, DRD3, nuclear RNA
polymerase D1B, NRPE1		 0.66 0.3 -0.34
4 AT5G01380 Homeodomain-like superfamily protein -0.66 0.32 -0.3
5 AT5G17200 Pectin lyase-like superfamily protein 0.66 0.33 -0.33
6 AT1G04050 homolog of SU(var)3-9 1 SET DOMAIN PROTEIN 13, homolog of
SU(var)3-9 1		 0.65 0.3 -0.32
7 AT3G49370 Calcium-dependent protein kinase (CDPK) family protein 0.65 0.33 -0.32
8 AT1G28200 FH interacting protein 1 FH interacting protein 1 -0.64 0.31 -0.32
9 AT3G01690 alpha/beta-Hydrolases superfamily protein 0.63 0.3 -0.31
10 AT1G38340 transposable element gene 0.63 0.3 -0.32
11 AT5G27200 acyl carrier protein 5 acyl carrier protein 5 0.63 0.33 -0.28
12 AT5G13930 Chalcone and stilbene synthase family protein ATCHS, CHALCONE SYNTHASE,
TRANSPARENT TESTA 4		 -0.61 0.31 -0.31
13 AT1G80870 Protein kinase superfamily protein 0.61 0.33 -0.33
14 AT5G24140 squalene monooxygenase 2 squalene monooxygenase 2 -0.6 0.34 -0.35
15 AT3G10620 nudix hydrolase homolog 26 nudix hydrolase homolog 26, nudix
hydrolase homolog 26		 -0.6 0.32 -0.32
16 AT1G80790 XH/XS domain-containing protein factor of DNA methylation 5 0.6 0.33 -0.31
17 AT4G00416 methyl-CPG-binding domain 3 methyl-CPG-binding domain 3 0.59 0.33 -0.3
18 AT5G37550 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT1G66190.1); Has 1807 Blast hits
to 1807 proteins in 277 species: Archae - 0; Bacteria - 0;
Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0;
Other Eukaryotes - 339 (source: NCBI BLink).		 -0.59 0.33 -0.31
19 AT5G52580 RabGAP/TBC domain-containing protein -0.59 0.3 -0.31
20 AT2G04370 unknown protein; Has 2 Blast hits to 2 proteins in 1
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 2; Viruses - 0; Other Eukaryotes - 0 (source: NCBI
BLink).		 0.59 0.32 -0.3
21 AT5G48880 peroxisomal 3-keto-acyl-CoA thiolase 2 3-KETO-ACYL-COENZYME A THIOLASE 5,
PEROXISOMAL-3-KETO-ACYL-COA
THIOLASE 1, peroxisomal
3-keto-acyl-CoA thiolase 2		 -0.59 0.32 -0.29
22 AT3G04990 BEST Arabidopsis thaliana protein match is: Frigida-like
protein (TAIR:AT5G27220.1); Has 30900 Blast hits to 17560
proteins in 1427 species: Archae - 757; Bacteria - 4112;
Metazoa - 14311; Fungi - 2221; Plants - 1348; Viruses - 71;
Other Eukaryotes - 8080 (source: NCBI BLink).		 0.59 0.31 -0.3
23 AT5G56720 Lactate/malate dehydrogenase family protein cytosolic-NAD-dependent malate
dehydrogenase 3		 -0.59 0.33 -0.32
24 AT2G37040 PHE ammonia lyase 1 ATPAL1, PHE ammonia lyase 1 -0.58 0.3 -0.31
25 AT3G25050 xyloglucan endotransglucosylase/hydrolase 3 xyloglucan
endotransglucosylase/hydrolase 3		 0.58 0.33 -0.32
26 AT3G18260 Reticulon family protein -0.58 0.32 -0.31
27 AT3G16580 F-box and associated interaction domains-containing protein 0.57 0.33 -0.32
28 AT4G03570 Cystatin/monellin superfamily protein 0.57 0.31 -0.33
29 AT5G40920 pseudogene, disease resistance protein (TIR-NBS-LRR class),
putative, domain signature TIR-NBS-LRR exists, suggestive
of a disease resistance protein.		 0.57 0.33 -0.33
30 AT1G08065 alpha carbonic anhydrase 5 alpha carbonic anhydrase 5, ALPHA
CARBONIC ANHYDRASE 5		 0.56 0.3 -0.3
31 AT1G70330 equilibrative nucleotide transporter 1 equilibrative nucleotide
transporter 1, equilibrative
nucleotide transporter 1		 -0.56 0.32 -0.32
32 AT5G42570 B-cell receptor-associated 31-like -0.56 0.3 -0.32
33 AT4G18450 Integrase-type DNA-binding superfamily protein 0.56 0.32 -0.32
34 AT3G51200 SAUR-like auxin-responsive protein family 0.56 0.35 -0.33
35 AT5G54460 wound-responsive protein-related 0.55 0.31 -0.3
36 AT3G55190 alpha/beta-Hydrolases superfamily protein 0.55 0.32 -0.31
37 AT5G27020 unknown protein; Has 1807 Blast hits to 1807 proteins in
277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi
- 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339
(source: NCBI BLink).		 -0.55 0.32 -0.31
38 AT3G15270 squamosa promoter binding protein-like 5 squamosa promoter binding
protein-like 5		 0.55 0.32 -0.31
39 AT1G08960 cation exchanger 11 CATION EXCHANGER 11, Arabidopsis
thaliana cation calcium exchanger
5, cation exchanger 11, cation
calcium exchanger 5		 0.54 0.32 -0.33
40 AT5G46460 Pentatricopeptide repeat (PPR) superfamily protein -0.54 0.31 -0.33
41 AT1G10240 FAR1-related sequence 11 FAR1-related sequence 11 0.53 0.31 -0.29
42 AT1G47470 Protein of unknown function (DUF784) 0.52 0.32 -0.28
43 AT5G63280 C2H2-like zinc finger protein 0.52 0.32 -0.34
44 AT2G45230 transposable element gene 0.52 0.32 -0.31
45 AT3G13730 cytochrome P450, family 90, subfamily D, polypeptide 1 cytochrome P450, family 90,
subfamily D, polypeptide 1		 0.52 0.29 -0.32
Metabolite information
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  CID Metabolite name Pathway Information Correlation link
Compound name Stereochemistry Aracyc name pcc 2.5% 97.5% PPI
46 C0090 Fructose D-(-)-Fructose D-Fructose sorbitol degradation I,
fructan degradation 		-0.58 0.31 -0.33 C0090