AT4G03770 : -
Query Information
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AGICode AT4G03770
Description transposable element gene
Gene information
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  Gene Code Description / Information Gene name Correlation link
pcc 2.5% 97.5% PPI
1 AT4G03770 transposable element gene 1 0.31 -0.32
2 AT1G30350 Pectin lyase-like superfamily protein -0.75 0.31 -0.31
3 AT3G42730 transposable element gene 0.73 0.32 -0.32
4 AT4G20770 Pentatricopeptide repeat (PPR) superfamily protein -0.73 0.32 -0.33
5 AT5G51160 Ankyrin repeat family protein -0.72 0.3 -0.28
6 AT5G26700 RmlC-like cupins superfamily protein -0.72 0.31 -0.31
7 AT3G23870 Protein of unknown function (DUF803) -0.71 0.31 -0.3
8 AT5G42400 SET domain protein 25 ARABIDOPSIS TRITHORAX-RELATED7,
SET domain protein 25		 -0.71 0.35 -0.32
9 AT4G13960 F-box/RNI-like superfamily protein 0.7 0.29 -0.3
10 AT5G26140 Putative lysine decarboxylase family protein ATLOG9, LONELY GUY 9 0.7 0.33 -0.32
11 AT5G12180 calcium-dependent protein kinase 17 calcium-dependent protein kinase
17		 -0.7 0.3 -0.3
12 AT4G09100 RING/U-box superfamily protein -0.7 0.32 -0.32
13 AT5G06839 bZIP transcription factor family protein bZIP65, TGACG (TGA) motif-binding
protein 10		 -0.69 0.31 -0.3
14 AT3G25260 Major facilitator superfamily protein -0.68 0.31 -0.31
15 AT2G45290 Transketolase -0.68 0.31 -0.32
16 AT3G28280 BEST Arabidopsis thaliana protein match is: F-box family
protein-related (TAIR:AT3G28330.1); Has 103 Blast hits to
100 proteins in 3 species: Archae - 0; Bacteria - 0;
Metazoa - 0; Fungi - 0; Plants - 103; Viruses - 0; Other
Eukaryotes - 0 (source: NCBI BLink).		 0.67 0.32 -0.31
17 AT5G28560 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
vacuole; Has 0 Blast hits to 0 proteins in 0 species
(source: NCBI BLink).		 0.67 0.33 -0.33
18 AT5G57420 indole-3-acetic acid inducible 33 indole-3-acetic acid inducible 33 -0.66 0.29 -0.31
19 AT5G65370 ENTH/ANTH/VHS superfamily protein 0.66 0.32 -0.31
20 AT1G54790 GDSL-like Lipase/Acylhydrolase superfamily protein 0.66 0.31 -0.31
21 AT1G59535 unknown protein; Has 2 Blast hits to 2 proteins in 1
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 2; Viruses - 0; Other Eukaryotes - 0 (source: NCBI
BLink).		 0.65 0.34 -0.33
22 AT2G01790 TRAF-like family protein -0.65 0.3 -0.34
23 AT5G26120 alpha-L-arabinofuranosidase 2 alpha-L-arabinofuranosidase 2,
ARABIDOPSIS THALIANA
ALPHA-L-ARABINOFURANOSIDASE 2		 0.65 0.32 -0.32
24 AT3G42390 unknown protein; Has 1 Blast hits to 1 proteins in 1
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 1; Viruses - 0; Other Eukaryotes - 0 (source: NCBI
BLink).		 0.65 0.33 -0.32
25 AT2G28680 RmlC-like cupins superfamily protein -0.64 0.3 -0.3
26 AT3G46500 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase
superfamily protein		 -0.64 0.34 -0.31
27 AT3G51680 NAD(P)-binding Rossmann-fold superfamily protein AtSDR2, short-chain
dehydrogenase/reductase 2		 -0.64 0.32 -0.32
28 AT3G27410 unknown protein; Has 10 Blast hits to 10 proteins in 2
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 10; Viruses - 0; Other Eukaryotes - 0 (source:
NCBI BLink).		 -0.64 0.32 -0.3
29 AT1G62914 pentatricopeptide (PPR) repeat-containing protein -0.64 0.33 -0.32
30 AT1G69990 Leucine-rich repeat protein kinase family protein -0.64 0.33 -0.32
31 AT3G49162 pseudogene of glycoside hydrolase family 28 protein 0.64 0.31 -0.31
32 AT1G54110 Membrane fusion protein Use1 0.64 0.3 -0.32
33 AT4G10950 SGNH hydrolase-type esterase superfamily protein -0.63 0.32 -0.31
34 AT1G28470 NAC domain containing protein 10 NAC domain containing protein 10,
NAC domain containing protein 10,
SECONDARY WALL-ASSOCIATED NAC
DOMAIN PROTEIN 3		 0.63 0.33 -0.34
35 AT4G15300 cytochrome P450, family 702, subfamily A, polypeptide 2 cytochrome P450, family 702,
subfamily A, polypeptide 2		 -0.63 0.31 -0.32
36 AT5G58280 AP2/B3-like transcriptional factor family protein 0.63 0.32 -0.3
37 AT3G23240 ethylene response factor 1 ETHYLENE RESPONSE FACTOR 1,
ethylene response factor 1		 -0.63 0.31 -0.31
38 AT2G36710 Pectin lyase-like superfamily protein 0.63 0.3 -0.31
39 AT2G44260 Plant protein of unknown function (DUF946) 0.63 0.31 -0.31
40 AT1G05330 unknown protein; Has 6 Blast hits to 6 proteins in 2
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 6; Viruses - 0; Other Eukaryotes - 0 (source: NCBI
BLink).		 0.63 0.32 -0.31
41 AT2G32690 glycine-rich protein 23 GLYCINE-RICH PROTEIN 23,
glycine-rich protein 23		 0.63 0.31 -0.3
42 AT5G24230 Lipase class 3-related protein -0.63 0.32 -0.31
43 AT3G30750 transposable element gene 0.63 0.32 -0.31
44 AT5G65170 VQ motif-containing protein -0.63 0.33 -0.33
45 AT3G21550 DUF679 domain membrane protein 2 Arabidopsis thaliana DUF679 domain
membrane protein 2, DUF679 domain
membrane protein 2		 0.63 0.33 -0.32
46 AT1G69170 Squamosa promoter-binding protein-like (SBP domain)
transcription factor family protein		 -0.62 0.32 -0.31
47 AT4G04370 Tetratricopeptide repeat (TPR)-like superfamily protein 0.62 0.3 -0.33
48 AT3G61800 CONTAINS InterPro DOMAIN/s: Protein of unknown function
DUF2043 (InterPro:IPR018610), ENTH/VHS
(InterPro:IPR008942); Has 308 Blast hits to 279 proteins in
95 species: Archae - 2; Bacteria - 30; Metazoa - 120; Fungi
- 19; Plants - 44; Viruses - 2; Other Eukaryotes - 91
(source: NCBI BLink).		 -0.62 0.33 -0.32
49 AT1G43790 tracheary element differentiation-related 6 tracheary element
differentiation-related 6		 0.62 0.31 -0.32
50 AT5G60090 Protein kinase superfamily protein -0.62 0.32 -0.3
51 AT4G13780 methionine--tRNA ligase, putative / methionyl-tRNA
synthetase, putative / MetRS, putative		 -0.62 0.28 -0.3
52 AT2G34400 Pentatricopeptide repeat (PPR-like) superfamily protein -0.62 0.3 -0.33
53 AT3G30190 transposable element gene -0.62 0.32 -0.31
54 AT1G66750 CDK-activating kinase 4 AT;CDKD;2, CDK-activating kinase
4, CDK-ACTIVATING KINASE 4,
CYCLIN-DEPENDENT KINASE D1;2,
CDKD;2		 0.62 0.3 -0.33
55 AT4G16920 Disease resistance protein (TIR-NBS-LRR class) family -0.62 0.32 -0.33
56 AT5G13530 protein kinases;ubiquitin-protein ligases KEEP ON GOING 0.62 0.31 -0.32
57 AT1G75930 extracellular lipase 6 extracellular lipase 6 0.62 0.33 -0.33
58 AT4G32630 ArfGap/RecO-like zinc finger domain-containing protein 0.62 0.31 -0.31
59 AT3G29010 Biotin/lipoate A/B protein ligase family 0.62 0.31 -0.32
60 AT4G32920 glycine-rich protein -0.61 0.31 -0.33
61 AT1G13420 sulfotransferase 4B ARABIDOPSIS THALIANA
SULFOTRANSFERASE 4B,
sulfotransferase 4B		 -0.61 0.31 -0.34
62 AT1G30990 Polyketide cyclase/dehydrase and lipid transport
superfamily protein		 -0.61 0.31 -0.31
63 AT1G21780 BTB/POZ domain-containing protein 0.61 0.32 -0.33
64 AT4G02190 Cysteine/Histidine-rich C1 domain family protein 0.61 0.31 -0.31
65 AT3G42600 transposable element gene -0.61 0.31 -0.33
66 AT3G18670 Ankyrin repeat family protein 0.61 0.32 -0.31
67 AT3G57100 Protein of unknown function (DUF677) 0.61 0.32 -0.3
68 AT4G23310 cysteine-rich RLK (RECEPTOR-like protein kinase) 23 cysteine-rich RLK (RECEPTOR-like
protein kinase) 23		 0.61 0.32 -0.31
69 AT5G28070 unknown protein; Has 1807 Blast hits to 1807 proteins in
277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi
- 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339
(source: NCBI BLink).		 0.61 0.32 -0.29
70 AT5G51870 AGAMOUS-like 71 AGAMOUS-like 71 -0.6 0.3 -0.33
71 AT5G11050 myb domain protein 64 myb domain protein 64, myb domain
protein 64		 -0.6 0.31 -0.3
72 AT1G65210 Galactose-binding protein 0.6 0.32 -0.31
73 AT4G24580 Rho GTPase activation protein (RhoGAP) with PH domain ROP1 ENHANCER 1 0.6 0.3 -0.31
74 AT1G06490 glucan synthase-like 7 Arabidopsis thaliana glucan
synthase-like 7, atgsl7, callose
synthase 7, gsl07, glucan
synthase-like 7, glucan
synthase-like 7		 -0.6 0.31 -0.35
75 AT5G01310 APRATAXIN-like APRATAXIN-like -0.6 0.32 -0.32
76 AT3G31920 transposable element gene -0.6 0.32 -0.31
77 AT4G39590 Galactose oxidase/kelch repeat superfamily protein 0.59 0.32 -0.31
78 AT5G24390 Ypt/Rab-GAP domain of gyp1p superfamily protein 0.59 0.32 -0.31
79 AT3G17440 novel plant snare 13 ATNPSN13, novel plant snare 13 0.59 0.32 -0.34
80 AT3G16380 poly(A) binding protein 6 poly(A) binding protein 6 -0.59 0.32 -0.31
81 AT4G21323 Subtilase family protein -0.59 0.32 -0.34
82 AT3G54130 Josephin family protein 0.59 0.33 -0.3
83 AT2G11830 transposable element gene 0.59 0.3 -0.31
84 AT1G63590 Receptor-like protein kinase-related family protein 0.59 0.33 -0.32
85 AT5G22540 Plant protein of unknown function (DUF247) -0.59 0.34 -0.32
86 AT3G09130 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT3G42786.1); Has 7 Blast hits to
7 proteins in 2 species: Archae - 0; Bacteria - 0; Metazoa
- 0; Fungi - 0; Plants - 7; Viruses - 0; Other Eukaryotes -
0 (source: NCBI BLink).		 -0.59 0.33 -0.33
87 AT4G36160 NAC domain containing protein 76 NAC domain containing protein 76,
NAC domain containing protein 76,
VASCULAR-RELATED NAC-DOMAIN 2		 0.59 0.32 -0.32
88 AT3G47700 RINT-1 / TIP-1 family maigo2 0.59 0.31 -0.3
89 AT5G14470 GHMP kinase family protein 0.59 0.32 -0.33
90 AT1G09720 Kinase interacting (KIP1-like) family protein -0.59 0.31 -0.32
91 AT3G50420 Pentatricopeptide repeat (PPR) superfamily protein -0.59 0.32 -0.33
92 AT3G20140 cytochrome P450, family 705, subfamily A, polypeptide 23 cytochrome P450, family 705,
subfamily A, polypeptide 23		 0.59 0.33 -0.33
93 AT2G28590 Protein kinase superfamily protein -0.58 0.32 -0.33
94 AT1G70910 RING/U-box superfamily protein DESPIERTO 0.58 0.3 -0.34
95 AT1G46912 F-box associated ubiquitination effector family protein -0.58 0.3 -0.33
96 AT5G28210 mRNA capping enzyme family protein 0.58 0.32 -0.31
97 AT4G03670 transposable element gene 0.58 0.32 -0.31
98 AT2G14550 pseudogene, putative pre-mRNA splicing factor,
non-consensus splice donor TA at exon 5; blastp match of
67% identity and 1.1e-68 P-value to
GP|28374170|gb|AAH45264.1||BC045264 Similar to splicing
factor 3b, subunit 4, 49kD {Xenopus laevis}		 0.58 0.33 -0.32
99 AT3G07930 DNA glycosylase superfamily protein 0.58 0.33 -0.34
100 AT2G11150 transposable element gene -0.58 0.32 -0.33
101 AT3G42340 transposable element gene 0.58 0.3 -0.32
102 AT2G45580 cytochrome P450, family 76, subfamily C, polypeptide 3 cytochrome P450, family 76,
subfamily C, polypeptide 3		 0.58 0.31 -0.32
103 AT1G07290 golgi nucleotide sugar transporter 2 golgi nucleotide sugar transporter
2		 -0.58 0.33 -0.32
104 AT1G30010 Intron maturase, type II family protein -0.57 0.31 -0.33
105 AT4G39160 Homeodomain-like superfamily protein -0.57 0.3 -0.31
106 AT4G29340 profilin 4 profilin 4 0.57 0.3 -0.32
107 AT5G25410 Protein of Unknown Function (DUF239) -0.57 0.32 -0.32
108 AT5G22870 Late embryogenesis abundant (LEA) hydroxyproline-rich
glycoprotein family		 0.57 0.31 -0.3
109 AT5G45970 RAC-like 2 Arabidopsis RAC-like 2,
ARABIDOPSIS THALIANA RAC 2,
RHO-RELATED PROTEIN FROM PLANTS 7,
RAC-like 2, ROP7		 0.57 0.3 -0.34
110 AT2G38150 alpha 1,4-glycosyltransferase family protein 0.57 0.34 -0.31
111 AT2G24950 Protein of Unknown Function (DUF239) 0.57 0.33 -0.31
112 AT3G20950 cytochrome P450, family 705, subfamily A, polypeptide 32 cytochrome P450, family 705,
subfamily A, polypeptide 32		 0.57 0.32 -0.33
113 AT1G43810 unknown protein; Has 6 Blast hits to 6 proteins in 2
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 6; Viruses - 0; Other Eukaryotes - 0 (source: NCBI
BLink).		 -0.57 0.31 -0.31
114 AT1G61760 Late embryogenesis abundant (LEA) hydroxyproline-rich
glycoprotein family		 0.57 0.31 -0.34
115 AT1G07160 Protein phosphatase 2C family protein -0.57 0.29 -0.31
116 AT4G07820 CAP (Cysteine-rich secretory proteins, Antigen 5, and
Pathogenesis-related 1 protein) superfamily protein		 -0.56 0.33 -0.3
117 AT1G08370 decapping 1 ATDCP1, decapping 1 0.56 0.34 -0.28
118 AT5G42170 SGNH hydrolase-type esterase superfamily protein -0.56 0.32 -0.32
119 AT2G22180 hydroxyproline-rich glycoprotein family protein 0.56 0.33 -0.3
120 AT5G50480 nuclear factor Y, subunit C6 nuclear factor Y, subunit C6 -0.56 0.33 -0.32
121 AT5G25750 unknown protein; Has 1807 Blast hits to 1807 proteins in
277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi
- 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339
(source: NCBI BLink).		 0.56 0.32 -0.31
122 AT4G05550 transposable element gene 0.56 0.32 -0.32
123 AT3G29510 transposable element gene 0.56 0.33 -0.33
124 AT2G22930 UDP-Glycosyltransferase superfamily protein -0.56 0.3 -0.31
125 AT5G05480 Peptide-N4-(N-acetyl-beta-glucosaminyl)asparagine amidase A
protein		 -0.56 0.32 -0.33
126 AT2G32930 zinc finger nuclease 2 zinc finger nuclease 2 -0.56 0.33 -0.3
127 AT1G75790 SKU5 similar 18 SKU5 similar 18 -0.56 0.3 -0.31
128 AT5G58010 LJRHL1-like 3 LJRHL1-like 3 -0.56 0.31 -0.3
129 AT3G44570 Arabidopsis retrotransposon ORF-1 protein 0.56 0.34 -0.33
130 AT3G42590 transposable element gene 0.55 0.32 -0.32
131 AT5G44760 C2 domain-containing protein 0.55 0.31 -0.3
132 AT5G48330 Regulator of chromosome condensation (RCC1) family protein RCC1/UVR8/GEF-like 2 0.55 0.32 -0.3
133 AT3G30230 myosin heavy chain-related 0.55 0.33 -0.3
134 AT2G40790 C-terminal cysteine residue is changed to a serine 2 C-terminal cysteine residue is
changed to a serine 2, C-terminal
cysteine residue is changed to a
serine 2		 0.54 0.32 -0.32
135 AT5G35870 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT2G04480.1); Has 1807 Blast hits
to 1807 proteins in 277 species: Archae - 0; Bacteria - 0;
Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0;
Other Eukaryotes - 339 (source: NCBI BLink).		 0.54 0.34 -0.33
136 AT4G24500 hydroxyproline-rich glycoprotein family protein 0.54 0.3 -0.33
137 AT3G29300 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
endomembrane system; EXPRESSED IN: 12 plant structures;
EXPRESSED DURING: 6 growth stages; Has 451 Blast hits to
349 proteins in 91 species: Archae - 0; Bacteria - 85;
Metazoa - 81; Fungi - 88; Plants - 18; Viruses - 1; Other
Eukaryotes - 178 (source: NCBI BLink).		 0.54 0.3 -0.33
138 AT3G32090 WRKY family transcription factor 0.54 0.3 -0.3
139 AT5G59660 Leucine-rich repeat protein kinase family protein 0.54 0.3 -0.31
140 ATMG00050 hypothetical protein ORF131 0.54 0.29 -0.33
141 AT5G37880 transposable element gene 0.54 0.32 -0.32
142 AT1G31760 SWIB/MDM2 domain superfamily protein 0.54 0.32 -0.32
143 AT1G15700 ATPase, F1 complex, gamma subunit protein ATPC2 0.54 0.31 -0.33
Metabolite information
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  CID Metabolite name Pathway Information Correlation link
Compound name Stereochemistry Aracyc name pcc 2.5% 97.5% PPI
144 C0119 Indole-3-ylmethyl-glucosinolate - indol-3-ylmethyl glucosinolate indole glucosinolate breakdown (active in intact plant cell),
indole glucosinolate breakdown (insect chewing induced),
glucosinolate biosynthesis from tryptophan 		-0.74 0.45 -0.44 C0119
145 C0136 Lactic acid D,L-Lactic acid Lactate pyruvate fermentation to lactate 0.73 0.45 -0.45 C0136
146 C0185 MST_3139.9 - - - -0.67 0.45 -0.47
147 C0025 2-Hydroxy-3-butenylglucosinolate (R),(S)-2-Hydroxy-3-butenylglucosinolate 2-hydroxy-3-butenylglucosinolate glucosinolate biosynthesis from dihomomethionine -0.6 0.47 -0.47 C0025