AT4G03560 : CALCIUM CHANNEL 1
Query Information
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AGICode AT4G03560
Description two-pore channel 1
Gene information
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  Gene Code Description / Information Gene name Correlation link
pcc 2.5% 97.5% PPI
1 AT4G03560 two-pore channel 1 CALCIUM CHANNEL 1, two-pore
channel 1, FATTY ACID OXYGENATION
UPREGULATED 2, TPC1, two-pore
channel 1		 1 0.32 -0.3
2 AT2G43010 phytochrome interacting factor 4 AtPIF4, phytochrome interacting
factor 4, SRL2		 0.72 0.32 -0.3
3 AT4G29020 glycine-rich protein 0.71 0.33 -0.3
4 AT1G53080 Legume lectin family protein 0.71 0.29 -0.28
5 AT3G55500 expansin A16 ATEXP16, expansin A16, ATHEXP
ALPHA 1.7, EXPANSIN 16, expansin
A16		 0.68 0.3 -0.32
6 AT1G29500 SAUR-like auxin-responsive protein family 0.68 0.29 -0.29
7 AT1G56145 Leucine-rich repeat transmembrane protein kinase -0.67 0.33 -0.3
8 AT5G09380 RNA polymerase III RPC4 -0.67 0.3 -0.33
9 AT5G05870 UDP-glucosyl transferase 76C1 UDP-glucosyl transferase 76C1 0.67 0.33 -0.3
10 AT3G28910 myb domain protein 30 ATMYB30, myb domain protein 30 -0.67 0.32 -0.31
11 AT4G16850 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT1G31130.1); Has 30201 Blast
hits to 17322 proteins in 780 species: Archae - 12;
Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants -
5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI
BLink).		 -0.66 0.32 -0.33
12 AT5G42720 Glycosyl hydrolase family 17 protein 0.66 0.3 -0.32
13 AT5G07250 RHOMBOID-like protein 3 RHOMBOID-like protein 3,
RHOMBOID-like protein 3		 0.66 0.31 -0.29
14 AT5G08590 SNF1-related protein kinase 2.1 ARABIDOPSIS SERINE/THREONINE
KINASE 2, ARABIDOPSIS SKP1-LIKE1,
SNRK2-1, SNF1-related protein
kinase 2.1, SRK2G		 0.64 0.31 -0.3
15 AT1G49830 basic helix-loop-helix (bHLH) DNA-binding superfamily
protein		 0.64 0.32 -0.33
16 AT2G42360 RING/U-box superfamily protein -0.64 0.31 -0.32
17 AT5G04660 cytochrome P450, family 77, subfamily A, polypeptide 4 cytochrome P450, family 77,
subfamily A, polypeptide 4		 0.64 0.34 -0.32
18 AT3G06330 RING/U-box superfamily protein 0.64 0.29 -0.33
19 AT5G07000 sulfotransferase 2B ARABIDOPSIS THALIANA
SULFOTRANSFERASE 2B,
sulfotransferase 2B		 0.63 0.31 -0.3
20 AT4G37010 centrin 2 centrin 2 -0.63 0.34 -0.33
21 AT3G53390 Transducin/WD40 repeat-like superfamily protein -0.63 0.35 -0.3
22 AT3G17950 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
chloroplast; EXPRESSED IN: 17 plant structures; EXPRESSED
DURING: 10 growth stages; Has 63 Blast hits to 63 proteins
in 12 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi
- 0; Plants - 63; Viruses - 0; Other Eukaryotes - 0
(source: NCBI BLink).		 0.63 0.33 -0.3
23 AT1G51500 ABC-2 type transporter family protein ATP-binding cassette G12,
AtABCG12, ARABIDOPSIS THALIANA
WHITE-BROWN COMPLEX 12, ECERIFERUM
5, D3, WHITE-BROWN COMPLEX 12		 0.63 0.31 -0.29
24 AT1G45180 RING/U-box superfamily protein -0.63 0.32 -0.32
25 AT5G42940 RING/U-box superfamily protein -0.63 0.31 -0.33
26 AT1G07610 metallothionein 1C metallothionein 1C -0.62 0.32 -0.34
27 AT5G27660 Trypsin family protein with PDZ domain -0.62 0.32 -0.34
28 AT1G77360 Tetratricopeptide repeat (TPR)-like superfamily protein -0.62 0.34 -0.33
29 AT3G48460 GDSL-like Lipase/Acylhydrolase superfamily protein 0.61 0.31 -0.32
30 AT1G01120 3-ketoacyl-CoA synthase 1 3-ketoacyl-CoA synthase 1 0.61 0.3 -0.32
31 AT5G53110 RING/U-box superfamily protein -0.6 0.33 -0.32
32 AT5G15610 Proteasome component (PCI) domain protein -0.6 0.32 -0.33
33 AT3G58180 ARM repeat superfamily protein -0.6 0.3 -0.31
34 AT1G48330 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT3G17580.1); Has 40 Blast hits
to 40 proteins in 11 species: Archae - 0; Bacteria - 0;
Metazoa - 0; Fungi - 0; Plants - 40; Viruses - 0; Other
Eukaryotes - 0 (source: NCBI BLink).		 0.6 0.31 -0.31
35 AT1G01520 Homeodomain-like superfamily protein ALTERED SEED GERMINATION 4 0.6 0.31 -0.32
36 AT4G35880 Eukaryotic aspartyl protease family protein 0.6 0.32 -0.34
37 AT3G07860 Ubiquitin-like superfamily protein -0.59 0.33 -0.3
38 AT1G61667 Protein of unknown function, DUF538 -0.59 0.33 -0.31
39 AT5G60850 OBF binding protein 4 OBF binding protein 4 0.59 0.31 -0.31
40 AT1G71090 Auxin efflux carrier family protein 0.59 0.31 -0.31
41 AT5G27670 histone H2A 7 histone H2A 7 0.58 0.34 -0.32
42 AT3G03900 adenosine-5'-phosphosulfate (APS) kinase 3 adenosine-5'-phosphosulfate (APS)
kinase 3		 0.58 0.32 -0.3
43 AT3G18850 lysophosphatidyl acyltransferase 5 lysophosphatidyl acyltransferase 5 0.58 0.32 -0.3
44 AT2G19470 casein kinase I-like 5 casein kinase I-like 5 -0.58 0.3 -0.34
45 AT1G26900 Pentatricopeptide repeat (PPR) superfamily protein -0.57 0.31 -0.31
46 AT4G20350 oxidoreductases -0.57 0.3 -0.33
47 AT4G02600 Seven transmembrane MLO family protein MILDEW RESISTANCE LOCUS O 1, MLO1 -0.56 0.32 -0.3
48 AT4G08320 Tetratricopeptide repeat (TPR)-like superfamily protein tetratricopeptide repeat 8 -0.56 0.33 -0.31
49 AT3G27960 Tetratricopeptide repeat (TPR)-like superfamily protein -0.55 0.33 -0.3
50 AT1G16190 Rad23 UV excision repair protein family RADIATION SENSITIVE23A -0.55 0.3 -0.32
51 AT1G72125 Major facilitator superfamily protein -0.55 0.3 -0.33
52 AT3G13870 Root hair defective 3 GTP-binding protein (RHD3) GOLGI MUTANT 8, ROOT HAIR
DEFECTIVE 3		 -0.54 0.32 -0.31
53 AT5G01720 RNI-like superfamily protein -0.54 0.33 -0.31
54 AT2G37540 NAD(P)-binding Rossmann-fold superfamily protein -0.54 0.3 -0.29
55 AT5G63200 tetratricopeptide repeat (TPR)-containing protein -0.54 0.31 -0.33
Metabolite information
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  CID Metabolite name Pathway Information Correlation link
Compound name Stereochemistry Aracyc name pcc 2.5% 97.5% PPI
56 C0135 Kaempferol-hexosyl-dirhamnoside - - - -0.77 0.42 -0.44
57 C0007 β-Sitosterol - Sitosterol plant sterol biosynthesis 0.75 0.45 -0.47 C0007
58 C0170 MST_2128.3 - - - 0.65 0.45 -0.46
59 C0055 Alanine D,L-Alanine D-Alanine; L-Alanine alanine degradation III,
beta-alanine biosynthesis II,
biotin biosynthesis II,
IAA biosynthesis II,
molybdenum cofactor biosynthesis II (eukaryotes),
phenylalanine degradation III,
alanine biosynthesis III,
IAA biosynthesis I,
alanine biosynthesis II,
tRNA charging,
molybdenum cofactor biosynthesis,
4-aminobutyrate degradation IV,
alanine degradation II (to D-lactate),
indole-3-acetyl-amino acid biosynthesis,
glutamate degradation IV 		-0.55 0.3 -0.34 C0055